RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 CCNI2Q6ZMN8 369 aaPredicted RBP14.56□□□□□ -0.08
VTI1A-209ENST00000496445 ERN2Q76MJ5 926 aaKnown RBP14.56□□□□□ -0.08
VTI1A-209ENST00000496445 PCDH20Q8N6Y1 951 aaKnown RBP14.56□□□□□ -0.08
VTI1A-209ENST00000496445 MFSD2AQ8NA29 543 aa14.56□□□□□ -0.08
VTI1A-209ENST00000496445 ARHGEF2Q92974 986 aaKnown RBP14.56□□□□□ -0.08
VTI1A-209ENST00000496445 MCEEQ96PE7 176 aa14.56□□□□□ -0.08
VTI1A-209ENST00000496445 MYOCQ99972 504 aa14.56□□□□□ -0.08
VTI1A-209ENST00000496445 BPIFA3Q9BQP9 254 aa14.56□□□□□ -0.08
VTI1A-209ENST00000496445 HDAC8Q9BY41 377 aa14.56□□□□□ -0.08
VTI1A-209ENST00000496445 TAS2R14Q9NYV8 317 aa14.56□□□□□ -0.08
VTI1A-209ENST00000496445 ZFR2Q9UPR6 939 aaKnown RBP14.56□□□□□ -0.08
VTI1A-209ENST00000496445 YKT6O15498 198 aa14.55□□□□□ -0.08
VTI1A-209ENST00000496445 PRLRP16471 622 aa14.55□□□□□ -0.08
VTI1A-209ENST00000496445 FERP16591 822 aa14.55□□□□□ -0.08
VTI1A-209ENST00000496445 RECQLP46063 649 aaPredicted RBP14.55□□□□□ -0.08
VTI1A-209ENST00000496445 ZNF143P52747 638 aaPredicted RBP14.55□□□□□ -0.08
VTI1A-209ENST00000496445 SLC20A2Q08357 652 aa14.55□□□□□ -0.08
VTI1A-209ENST00000496445 BNIP3Q12983 259 aa14.55□□□□□ -0.08
VTI1A-209ENST00000496445 ZNF284Q2VY69 593 aa14.55□□□□□ -0.08
VTI1A-209ENST00000496445 INAVAQ3KP66 663 aa14.55□□□□□ -0.08
VTI1A-209ENST00000496445 CARD16Q5EG05 197 aa14.55□□□□□ -0.08
VTI1A-209ENST00000496445 SEL1L3Q68CR1 1132 aa14.55□□□□□ -0.08
VTI1A-209ENST00000496445 DNAJC24Q6P3W2 148 aa14.55□□□□□ -0.08
VTI1A-209ENST00000496445 TMPRSS7Q7RTY8 843 aa14.55□□□□□ -0.08
VTI1A-209ENST00000496445 KANSL1Q7Z3B3 1105 aa14.55□□□□□ -0.08
VTI1A-209ENST00000496445 IRF2BP2Q7Z5L9 587 aa14.55□□□□□ -0.08
VTI1A-209ENST00000496445 IQCHQ86VS3 1027 aa14.55□□□□□ -0.08
VTI1A-209ENST00000496445 HORMAD1Q86X24 394 aa14.55□□□□□ -0.08
VTI1A-209ENST00000496445 MARCH9Q86YJ5 346 aa14.55□□□□□ -0.08
VTI1A-209ENST00000496445 KLK6Q92876 244 aa14.55□□□□□ -0.08
VTI1A-209ENST00000496445 TM6SF2Q9BZW4 377 aa14.55□□□□□ -0.08
VTI1A-209ENST00000496445 RETREG1Q9H6L5 497 aa14.55□□□□□ -0.08
VTI1A-209ENST00000496445 NOL6Q9H6R4 1146 aaKnown RBP14.55□□□□□ -0.08
VTI1A-209ENST00000496445 ERVMER34-1Q9H9K5 563 aa14.55□□□□□ -0.08
VTI1A-209ENST00000496445 FZD3Q9NPG1 666 aa14.55□□□□□ -0.08
VTI1A-209ENST00000496445 RTN4Q9NQC3 1192 aaKnown RBP14.55□□□□□ -0.08
VTI1A-209ENST00000496445 DYRK4Q9NR20 520 aa14.55□□□□□ -0.08
VTI1A-209ENST00000496445 FTSJ1Q9UET6 329 aa14.55□□□□□ -0.08
VTI1A-209ENST00000496445 LOC400499M0QZD8 3231 aa14.54□□□□□ -0.08
VTI1A-209ENST00000496445 FAM208BQ5VWN6 2430 aa14.54□□□□□ -0.08
VTI1A-209ENST00000496445 CXorf51AA0A1B0GTR3 108 aa14.54□□□□□ -0.08
VTI1A-209ENST00000496445 SRRM3A6NNA2 597 aaPredicted RBP14.54□□□□□ -0.08
VTI1A-209ENST00000496445 PRAMEF26H0Y7S4 382 aa14.54□□□□□ -0.08
VTI1A-209ENST00000496445 TAF4O00268 1085 aa14.54□□□□□ -0.08
VTI1A-209ENST00000496445 SLC31A1O15431 190 aa14.54□□□□□ -0.08
VTI1A-209ENST00000496445 RAMP2O60895 175 aa14.54□□□□□ -0.08
VTI1A-209ENST00000496445 ITGAVP06756 1048 aa14.54□□□□□ -0.08
VTI1A-209ENST00000496445 ADRB3P13945 408 aa14.54□□□□□ -0.08
VTI1A-209ENST00000496445 ITGB7P26010 798 aa14.54□□□□□ -0.08
VTI1A-209ENST00000496445 GKP32189 559 aa14.54□□□□□ -0.08
VTI1A-209ENST00000496445 RXRGP48443 463 aa14.54□□□□□ -0.08
VTI1A-209ENST00000496445 ARRB1P49407 418 aaPredicted RBP14.54□□□□□ -0.08
VTI1A-209ENST00000496445 OGDHQ02218 1023 aa14.54□□□□□ -0.08
VTI1A-209ENST00000496445 TMEM259Q4ZIN3 620 aa14.54□□□□□ -0.08
VTI1A-209ENST00000496445 SFMBT2Q5VUG0 894 aa14.54□□□□□ -0.08
VTI1A-209ENST00000496445 E4F1Q66K89 784 aaPredicted RBP14.54□□□□□ -0.08
VTI1A-209ENST00000496445 NEK5Q6P3R8 708 aa14.54□□□□□ -0.08
VTI1A-209ENST00000496445 LEKR1Q6ZMV7 388 aa14.54□□□□□ -0.08
VTI1A-209ENST00000496445 PARS2Q7L3T8 475 aaKnown RBP14.54□□□□□ -0.08
VTI1A-209ENST00000496445 SLFN11Q7Z7L1 901 aa14.54□□□□□ -0.08
VTI1A-209ENST00000496445 MCOLN2Q8IZK6 566 aa14.54□□□□□ -0.08
VTI1A-209ENST00000496445 OXR1Q8N573 874 aa14.54□□□□□ -0.08
VTI1A-209ENST00000496445 OR6K2Q8NGY2 324 aa14.54□□□□□ -0.08
VTI1A-209ENST00000496445 PPP1R16AQ96I34 528 aa14.54□□□□□ -0.08
VTI1A-209ENST00000496445 HEPHQ9BQS7 1158 aa14.54□□□□□ -0.08
VTI1A-209ENST00000496445 MAGEH1Q9H213 219 aa14.54□□□□□ -0.08
VTI1A-209ENST00000496445 ZDHHC6Q9H6R6 413 aa14.54□□□□□ -0.08
VTI1A-209ENST00000496445 FZD10Q9ULW2 581 aa14.54□□□□□ -0.08
VTI1A-209ENST00000496445 TDRD6O60522 2096 aaKnown RBP14.53□□□□□ -0.08
VTI1A-209ENST00000496445 LRRC53A6NM62 1247 aa14.53□□□□□ -0.08
VTI1A-209ENST00000496445 ATMINO43313 823 aaPredicted RBP14.53□□□□□ -0.08
VTI1A-209ENST00000496445 THEGLP0DJG4 465 aa14.53□□□□□ -0.08
VTI1A-209ENST00000496445 L1CAMP32004 1257 aa14.53□□□□□ -0.08
VTI1A-209ENST00000496445 ETFBP38117 255 aa14.53□□□□□ -0.08
VTI1A-209ENST00000496445 DNA2P51530 1060 aa14.53□□□□□ -0.08
VTI1A-209ENST00000496445 NEK3P51956 506 aa14.53□□□□□ -0.08
VTI1A-209ENST00000496445 OVGP1Q12889 678 aa14.53□□□□□ -0.08
VTI1A-209ENST00000496445 DNAJC3Q13217 504 aa14.53□□□□□ -0.08
VTI1A-209ENST00000496445 FGL2Q14314 439 aa14.53□□□□□ -0.08
VTI1A-209ENST00000496445 STAT4Q14765 748 aa14.53□□□□□ -0.08
VTI1A-209ENST00000496445 POLD3Q15054 466 aaPredicted RBP14.53□□□□□ -0.08
VTI1A-209ENST00000496445 EFHC2Q5JST6 749 aa14.53□□□□□ -0.08
VTI1A-209ENST00000496445 ACAD10Q6JQN1 1059 aa14.53□□□□□ -0.08
VTI1A-209ENST00000496445 GCNT7Q6ZNI0 430 aa14.53□□□□□ -0.08
VTI1A-209ENST00000496445 DNAAF5Q86Y56 855 aa14.53□□□□□ -0.08
VTI1A-209ENST00000496445 SLC22A18ASQ8N1D0 253 aa14.53□□□□□ -0.08
VTI1A-209ENST00000496445 EID2Q8N6I1 236 aa14.53□□□□□ -0.08
VTI1A-209ENST00000496445 ISG20Q96AZ6 181 aaKnown RBP14.53□□□□□ -0.08
VTI1A-209ENST00000496445 CNDP2Q96KP4 475 aaKnown RBP14.53□□□□□ -0.08
VTI1A-209ENST00000496445 FUCA2Q9BTY2 467 aa14.53□□□□□ -0.08
VTI1A-209ENST00000496445 NAT10Q9H0A0 1025 aaKnown RBP14.53□□□□□ -0.08
VTI1A-209ENST00000496445 KLC2Q9H0B6 622 aa14.53□□□□□ -0.08
VTI1A-209ENST00000496445 CAAP1Q9H8G2 361 aa14.53□□□□□ -0.08
VTI1A-209ENST00000496445 HECAQ9UBI9 543 aaPredicted RBP14.53□□□□□ -0.08
VTI1A-209ENST00000496445 MYO6Q9UM54 1294 aa14.53□□□□□ -0.08
VTI1A-209ENST00000496445 FADS3Q9Y5Q0 445 aa14.53□□□□□ -0.08
VTI1A-209ENST00000496445 GOLGA4Q13439 2230 aaKnown RBP14.53□□□□□ -0.08
VTI1A-209ENST00000496445 LRRK1Q38SD2 2015 aa14.53□□□□□ -0.08
VTI1A-209ENST00000496445 ANKRD36A6QL64 1941 aa14.53□□□□□ -0.08
VTI1A-209ENST00000496445 MYLKQ15746 1914 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms