RNA–Protein interactions for RNA: ENST00000496296.5

FGFR1-223, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 1,898 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-223ENST00000496296 INPP5DQ92835 1189 aa21.51■■□□□ 1.03
FGFR1-223ENST00000496296 IGSF8Q969P0 613 aa21.51■■□□□ 1.03
FGFR1-223ENST00000496296 ERP27Q96DN0 273 aa21.51■■□□□ 1.03
FGFR1-223ENST00000496296 C7orf26Q96N11 449 aa21.51■■□□□ 1.03
FGFR1-223ENST00000496296 SAMD11Q96NU1 681 aa21.51■■□□□ 1.03
FGFR1-223ENST00000496296 GCNAQ96QF7 691 aa21.51■■□□□ 1.03
FGFR1-223ENST00000496296 DDX50Q9BQ39 737 aaKnown RBP21.51■■□□□ 1.03
FGFR1-223ENST00000496296 KLF16Q9BXK1 252 aaPredicted RBP21.51■■□□□ 1.03
FGFR1-223ENST00000496296 CEP41Q9BYV8 373 aa21.51■■□□□ 1.03
FGFR1-223ENST00000496296 RNF38Q9H0F5 515 aa21.51■■□□□ 1.03
FGFR1-223ENST00000496296 LRMDAQ9H2I8 198 aa21.51■■□□□ 1.03
FGFR1-223ENST00000496296 RETREG1Q9H6L5 497 aa21.51■■□□□ 1.03
FGFR1-223ENST00000496296 SAR1AQ9NR31 198 aa21.51■■□□□ 1.03
FGFR1-223ENST00000496296 COLQQ9Y215 455 aaPredicted RBP21.51■■□□□ 1.03
FGFR1-223ENST00000496296 LAMA2P24043 3122 aaKnown RBP21.51■■□□□ 1.03
FGFR1-223ENST00000496296 DNAJC6O75061 913 aa21.5■■□□□ 1.03
FGFR1-223ENST00000496296 STC2O76061 302 aa21.5■■□□□ 1.03
FGFR1-223ENST00000496296 DNAJB1P25685 340 aa21.5■■□□□ 1.03
FGFR1-223ENST00000496296 GABRR2P28476 465 aa21.5■■□□□ 1.03
FGFR1-223ENST00000496296 KCNJ2P63252 427 aa21.5■■□□□ 1.03
FGFR1-223ENST00000496296 BMPR2Q13873 1038 aa21.5■■□□□ 1.03
FGFR1-223ENST00000496296 ALFQ53S48 1182 aa21.5■■□□□ 1.03
FGFR1-223ENST00000496296 RABGAP1LQ5R372 815 aa21.5■■□□□ 1.03
FGFR1-223ENST00000496296 PACS1Q6VY07 963 aa21.5■■□□□ 1.03
FGFR1-223ENST00000496296 DENND1CQ8IV53 801 aa21.5■■□□□ 1.03
FGFR1-223ENST00000496296 LGI2Q8N0V4 545 aa21.5■■□□□ 1.03
FGFR1-223ENST00000496296 ZSCAN18Q8TBC5 510 aaPredicted RBP21.5■■□□□ 1.03
FGFR1-223ENST00000496296 TMEM237Q96Q45 408 aa21.5■■□□□ 1.03
FGFR1-223ENST00000496296 IL21Q9HBE4 155 aa21.5■■□□□ 1.03
FGFR1-223ENST00000496296 NPHS2Q9NP85 383 aa21.5■■□□□ 1.03
FGFR1-223ENST00000496296 NDFIP2Q9NV92 336 aa21.5■■□□□ 1.03
FGFR1-223ENST00000496296 SYBUQ9NX95 663 aa21.5■■□□□ 1.03
FGFR1-223ENST00000496296 SHROOM3Q8TF72 1996 aa21.5■■□□□ 1.03
FGFR1-223ENST00000496296 ARHGAP42A6NI28 874 aa21.49■■□□□ 1.03
FGFR1-223ENST00000496296 TRAFD1O14545 582 aaPredicted RBP21.49■■□□□ 1.03
FGFR1-223ENST00000496296 CACNG3O60359 315 aa21.49■■□□□ 1.03
FGFR1-223ENST00000496296 HNRNPCL1O60812 293 aaKnown RBP21.49■■□□□ 1.03
FGFR1-223ENST00000496296 BGNP21810 368 aa21.49■■□□□ 1.03
FGFR1-223ENST00000496296 CDC25CP30307 473 aa21.49■■□□□ 1.03
FGFR1-223ENST00000496296 CORO1AP31146 461 aaKnown RBP21.49■■□□□ 1.03
FGFR1-223ENST00000496296 MAPKAPK2P49137 400 aa21.49■■□□□ 1.03
FGFR1-223ENST00000496296 CLCN4P51793 760 aa21.49■■□□□ 1.03
FGFR1-223ENST00000496296 SESN2P58004 480 aaPredicted RBP21.49■■□□□ 1.03
FGFR1-223ENST00000496296 KYAT3Q6YP21 454 aaKnown RBP21.49■■□□□ 1.03
FGFR1-223ENST00000496296 GKN1Q9NS71 199 aa21.49■■□□□ 1.03
FGFR1-223ENST00000496296 MTO1Q9Y2Z2 717 aaKnown RBP21.49■■□□□ 1.03
FGFR1-223ENST00000496296 MAFKO60675 156 aa21.49■■□□□ 1.03
FGFR1-223ENST00000496296 CNTN5O94779 1100 aa21.49■■□□□ 1.03
FGFR1-223ENST00000496296 C1RP00736 705 aa21.49■■□□□ 1.03
FGFR1-223ENST00000496296 POLBP06746 335 aa21.49■■□□□ 1.03
FGFR1-223ENST00000496296 IRF1P10914 325 aa21.49■■□□□ 1.03
FGFR1-223ENST00000496296 MYOGP15173 224 aa21.49■■□□□ 1.03
FGFR1-223ENST00000496296 HDCP19113 662 aa21.49■■□□□ 1.03
FGFR1-223ENST00000496296 CD68P34810 354 aaPredicted RBP21.49■■□□□ 1.03
FGFR1-223ENST00000496296 PAPOLAP51003 745 aaKnown RBP21.49■■□□□ 1.03
FGFR1-223ENST00000496296 ANO4Q32M45 955 aa21.49■■□□□ 1.03
FGFR1-223ENST00000496296 C9orf50Q5SZB4 431 aa21.49■■□□□ 1.03
FGFR1-223ENST00000496296 ISL2Q96A47 359 aa21.49■■□□□ 1.03
FGFR1-223ENST00000496296 AGAP3Q96P47 875 aa21.49■■□□□ 1.03
FGFR1-223ENST00000496296 LRRC40Q9H9A6 602 aa21.49■■□□□ 1.03
FGFR1-223ENST00000496296 KCNK13Q9HB14 408 aa21.49■■□□□ 1.03
FGFR1-223ENST00000496296 AP3B1O00203 1094 aa21.48■■□□□ 1.03
FGFR1-223ENST00000496296 MATN3O15232 486 aa21.48■■□□□ 1.03
FGFR1-223ENST00000496296 NEBLO76041 1014 aa21.48■■□□□ 1.03
FGFR1-223ENST00000496296 ATP6V1G2O95670 118 aa21.48■■□□□ 1.03
FGFR1-223ENST00000496296 JCHAINP01591 159 aa21.48■■□□□ 1.03
FGFR1-223ENST00000496296 CA3P07451 260 aa21.48■■□□□ 1.03
FGFR1-223ENST00000496296 DLDP09622 509 aaKnown RBP21.48■■□□□ 1.03
FGFR1-223ENST00000496296 MAGEA10P43363 369 aaPredicted RBP21.48■■□□□ 1.03
FGFR1-223ENST00000496296 ZBTB17Q13105 803 aa21.48■■□□□ 1.03
FGFR1-223ENST00000496296 C5orf22Q49AR2 442 aa21.48■■□□□ 1.03
FGFR1-223ENST00000496296 MROH9Q5TGP6 573 aa21.48■■□□□ 1.03
FGFR1-223ENST00000496296 FAM91A1Q658Y4 838 aa21.48■■□□□ 1.03
FGFR1-223ENST00000496296 ATG16L1Q676U5 607 aa21.48■■□□□ 1.03
FGFR1-223ENST00000496296 PDE12Q6L8Q7 609 aaKnown RBP21.48■■□□□ 1.03
FGFR1-223ENST00000496296 CASC4Q6P4E1 433 aa21.48■■□□□ 1.03
FGFR1-223ENST00000496296 TMEM135Q86UB9 458 aa21.48■■□□□ 1.03
FGFR1-223ENST00000496296 NDUFAF2Q8N183 169 aa21.48■■□□□ 1.03
FGFR1-223ENST00000496296 RFWD2Q8NHY2 731 aa21.48■■□□□ 1.03
FGFR1-223ENST00000496296 THOC1Q96FV9 657 aaKnown RBP21.48■■□□□ 1.03
FGFR1-223ENST00000496296 TEKT5Q96M29 485 aa21.48■■□□□ 1.03
FGFR1-223ENST00000496296 ASAH2Q9NR71 780 aa21.48■■□□□ 1.03
FGFR1-223ENST00000496296 NUP205Q92621 2012 aa21.48■■□□□ 1.03
FGFR1-223ENST00000496296 ZBTB24O43167 697 aaPredicted RBP21.47■■□□□ 1.03
FGFR1-223ENST00000496296 PSMD3O43242 534 aa21.47■■□□□ 1.03
FGFR1-223ENST00000496296 T-ENOLP0DO92 83 aa21.47■■□□□ 1.03
FGFR1-223ENST00000496296 OR1E1P30953 314 aa21.47■■□□□ 1.03
FGFR1-223ENST00000496296 NPY2RP49146 381 aa21.47■■□□□ 1.03
FGFR1-223ENST00000496296 GTF2A1P52655 376 aaPredicted RBP21.47■■□□□ 1.03
FGFR1-223ENST00000496296 SMAD3P84022 425 aaKnown RBP21.47■■□□□ 1.03
FGFR1-223ENST00000496296 PRPSAP1Q14558 356 aa21.47■■□□□ 1.03
FGFR1-223ENST00000496296 TXNDC8Q6A555 127 aa21.47■■□□□ 1.03
FGFR1-223ENST00000496296 ARHGAP36Q6ZRI8 547 aa21.47■■□□□ 1.03
FGFR1-223ENST00000496296 GDF15Q99988 308 aa21.47■■□□□ 1.03
FGFR1-223ENST00000496296 PRO3102Q9H379 93 aa21.47■■□□□ 1.03
FGFR1-223ENST00000496296 IPO11Q9UI26 975 aaKnown RBP21.47■■□□□ 1.03
FGFR1-223ENST00000496296 LNPEPQ9UIQ6 1025 aa21.47■■□□□ 1.03
FGFR1-223ENST00000496296 MAGEB16A2A368 324 aa21.47■■□□□ 1.03
FGFR1-223ENST00000496296 GRXCR1A8MXD5 290 aa21.47■■□□□ 1.03
FGFR1-223ENST00000496296 F5H423 210 aaPredicted RBP21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms