RNA–Protein interactions for RNA: ENST00000496222.1

TRIM59-207, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-207ENST00000496222 OR8K1Q8NGG5 319 aa12.55□□□□□ -0.4
TRIM59-207ENST00000496222 BTBD6Q96KE9 485 aa12.55□□□□□ -0.4
TRIM59-207ENST00000496222 EIF3CQ99613 913 aaKnown RBP12.55□□□□□ -0.4
TRIM59-207ENST00000496222 HEPHQ9BQS7 1158 aa12.55□□□□□ -0.4
TRIM59-207ENST00000496222 HDAC8Q9BY41 377 aa12.55□□□□□ -0.4
TRIM59-207ENST00000496222 DHX35Q9H5Z1 703 aaKnown RBP12.55□□□□□ -0.4
TRIM59-207ENST00000496222 CATSPERBQ9H7T0 1116 aa12.55□□□□□ -0.4
TRIM59-207ENST00000496222 PDFQ9HBH1 243 aa12.55□□□□□ -0.4
TRIM59-207ENST00000496222 IL36AQ9UHA7 158 aa12.55□□□□□ -0.4
TRIM59-207ENST00000496222 ANKRD6Q9Y2G4 727 aa12.55□□□□□ -0.4
TRIM59-207ENST00000496222 TP53BP1Q12888 1972 aaPredicted RBP12.55□□□□□ -0.4
TRIM59-207ENST00000496222 TBC1D3DA0A087WVF3 549 aa12.54□□□□□ -0.4
TRIM59-207ENST00000496222 TBC1D3IA0A087WXS9 549 aa12.54□□□□□ -0.4
TRIM59-207ENST00000496222 TBC1D3EA0A087X179 549 aa12.54□□□□□ -0.4
TRIM59-207ENST00000496222 TBC1D3KA0A087X1G2 549 aa12.54□□□□□ -0.4
TRIM59-207ENST00000496222 TBC1D3FA6NER0 549 aaPredicted RBP12.54□□□□□ -0.4
TRIM59-207ENST00000496222 TBC1D3LB9A6J9 549 aa12.54□□□□□ -0.4
TRIM59-207ENST00000496222 PRPSAP2O60256 369 aa12.54□□□□□ -0.4
TRIM59-207ENST00000496222 OPHN1O60890 802 aa12.54□□□□□ -0.4
TRIM59-207ENST00000496222 GSRP00390 522 aa12.54□□□□□ -0.4
TRIM59-207ENST00000496222 PRNPP04156 253 aa12.54□□□□□ -0.4
TRIM59-207ENST00000496222 TPM3P06753 285 aa12.54□□□□□ -0.4
TRIM59-207ENST00000496222 TBC1D3HP0C7X1 549 aa12.54□□□□□ -0.4
TRIM59-207ENST00000496222 CEACAM1P13688 526 aa12.54□□□□□ -0.4
TRIM59-207ENST00000496222 GKP32189 559 aa12.54□□□□□ -0.4
TRIM59-207ENST00000496222 CTSKP43235 329 aa12.54□□□□□ -0.4
TRIM59-207ENST00000496222 GEMIN4P57678 1058 aaKnown RBP12.54□□□□□ -0.4
TRIM59-207ENST00000496222 TPI1P60174 286 aa12.54□□□□□ -0.4
TRIM59-207ENST00000496222 RACK1P63244 317 aaKnown RBP12.54□□□□□ -0.4
TRIM59-207ENST00000496222 SLC25A11Q02978 314 aaKnown RBP12.54□□□□□ -0.4
TRIM59-207ENST00000496222 SLC14A1Q13336 389 aa12.54□□□□□ -0.4
TRIM59-207ENST00000496222 DPYSQ14117 519 aa12.54□□□□□ -0.4
TRIM59-207ENST00000496222 TRIM14Q14142 442 aa12.54□□□□□ -0.4
TRIM59-207ENST00000496222 PIGHQ14442 188 aaPredicted RBP12.54□□□□□ -0.4
TRIM59-207ENST00000496222 DPYSL2Q16555 572 aa12.54□□□□□ -0.4
TRIM59-207ENST00000496222 HLA-BQ31612 363 aa12.54□□□□□ -0.4
TRIM59-207ENST00000496222 PARP15Q460N3 678 aa12.54□□□□□ -0.4
TRIM59-207ENST00000496222 INO80DQ53TQ3 878 aaPredicted RBP12.54□□□□□ -0.4
TRIM59-207ENST00000496222 CCDC122Q5T0U0 273 aa12.54□□□□□ -0.4
TRIM59-207ENST00000496222 TBC1D3GQ6DHY5 549 aa12.54□□□□□ -0.4
TRIM59-207ENST00000496222 TBC1D3CQ6IPX1 549 aa12.54□□□□□ -0.4
TRIM59-207ENST00000496222 PSAPL1Q6NUJ1 521 aa12.54□□□□□ -0.4
TRIM59-207ENST00000496222 SARM1Q6SZW1 724 aa12.54□□□□□ -0.4
TRIM59-207ENST00000496222 RFX8Q6ZV50 586 aa12.54□□□□□ -0.4
TRIM59-207ENST00000496222 VPS36Q86VN1 386 aa12.54□□□□□ -0.4
TRIM59-207ENST00000496222 TRIM69Q86WT6 500 aa12.54□□□□□ -0.4
TRIM59-207ENST00000496222 CPNE8Q86YQ8 564 aa12.54□□□□□ -0.4
TRIM59-207ENST00000496222 TBC1D3Q8IZP1 549 aaPredicted RBP12.54□□□□□ -0.4
TRIM59-207ENST00000496222 NPWQ8N729 165 aa12.54□□□□□ -0.4
TRIM59-207ENST00000496222 CCDC114Q96M63 670 aa12.54□□□□□ -0.4
TRIM59-207ENST00000496222 SLC6A18Q96N87 628 aa12.54□□□□□ -0.4
TRIM59-207ENST00000496222 NUP85Q9BW27 656 aa12.54□□□□□ -0.4
TRIM59-207ENST00000496222 PACSIN1Q9BY11 444 aa12.54□□□□□ -0.4
TRIM59-207ENST00000496222 TM6SF2Q9BZW4 377 aa12.54□□□□□ -0.4
TRIM59-207ENST00000496222 SLC39A8Q9C0K1 460 aa12.54□□□□□ -0.4
TRIM59-207ENST00000496222 PREBQ9HCU5 417 aa12.54□□□□□ -0.4
TRIM59-207ENST00000496222 CWC15Q9P013 229 aaKnown RBP12.54□□□□□ -0.4
TRIM59-207ENST00000496222 WASF3Q9UPY6 502 aa12.54□□□□□ -0.4
TRIM59-207ENST00000496222 FNDC3AQ9Y2H6 1198 aaKnown RBP12.54□□□□□ -0.4
TRIM59-207ENST00000496222 FARP1Q9Y4F1 1045 aaPredicted RBP12.54□□□□□ -0.4
TRIM59-207ENST00000496222 SNX11Q9Y5W9 270 aa12.54□□□□□ -0.4
TRIM59-207ENST00000496222 AKAP13Q12802 2813 aa12.54□□□□□ -0.4
TRIM59-207ENST00000496222 SSU72P8A0A1W2PR75 194 aa12.53□□□□□ -0.4
TRIM59-207ENST00000496222 ZSCAN5CA6NGD5 496 aaPredicted RBP12.53□□□□□ -0.4
TRIM59-207ENST00000496222 J3KR12 359 aa12.53□□□□□ -0.4
TRIM59-207ENST00000496222 EEF2KO00418 725 aaKnown RBP12.53□□□□□ -0.4
TRIM59-207ENST00000496222 KPNA3O00505 521 aaPredicted RBP12.53□□□□□ -0.4
TRIM59-207ENST00000496222 VILLO15195 856 aa12.53□□□□□ -0.4
TRIM59-207ENST00000496222 TMCC1O94876 653 aa12.53□□□□□ -0.4
TRIM59-207ENST00000496222 ZNF883P0CG24 379 aa12.53□□□□□ -0.4
TRIM59-207ENST00000496222 RARAP10276 462 aa12.53□□□□□ -0.4
TRIM59-207ENST00000496222 DESP17661 470 aa12.53□□□□□ -0.4
TRIM59-207ENST00000496222 ERCC2P18074 760 aa12.53□□□□□ -0.4
TRIM59-207ENST00000496222 ITGB7P26010 798 aa12.53□□□□□ -0.4
TRIM59-207ENST00000496222 NOVA1P51513 510 aaKnown RBP12.53□□□□□ -0.4
TRIM59-207ENST00000496222 NDST2P52849 883 aa12.53□□□□□ -0.4
TRIM59-207ENST00000496222 ATXN3P54252 364 aaPredicted RBP12.53□□□□□ -0.4
TRIM59-207ENST00000496222 ADKP55263 362 aaKnown RBP12.53□□□□□ -0.4
TRIM59-207ENST00000496222 FAM193AP78312 1265 aa12.53□□□□□ -0.4
TRIM59-207ENST00000496222 CYTH1Q15438 398 aa12.53□□□□□ -0.4
TRIM59-207ENST00000496222 SLC18A3Q16572 532 aa12.53□□□□□ -0.4
TRIM59-207ENST00000496222 ERN2Q76MJ5 926 aaKnown RBP12.53□□□□□ -0.4
TRIM59-207ENST00000496222 POLNQ7Z5Q5 900 aa12.53□□□□□ -0.4
TRIM59-207ENST00000496222 TP53INP2Q8IXH6 220 aa12.53□□□□□ -0.4
TRIM59-207ENST00000496222 NETO2Q8NC67 525 aa12.53□□□□□ -0.4
TRIM59-207ENST00000496222 DEFB124Q8NES8 71 aa12.53□□□□□ -0.4
TRIM59-207ENST00000496222 OR2AP1Q8NGE2 309 aa12.53□□□□□ -0.4
TRIM59-207ENST00000496222 GRIN3AQ8TCU5 1115 aa12.53□□□□□ -0.4
TRIM59-207ENST00000496222 TSC1Q92574 1164 aa12.53□□□□□ -0.4
TRIM59-207ENST00000496222 CHP1Q99653 195 aa12.53□□□□□ -0.4
TRIM59-207ENST00000496222 NCAPGQ9BPX3 1015 aa12.53□□□□□ -0.4
TRIM59-207ENST00000496222 GAREM1Q9H706 876 aa12.53□□□□□ -0.4
TRIM59-207ENST00000496222 ABHD10Q9NUJ1 306 aa12.53□□□□□ -0.4
TRIM59-207ENST00000496222 HECAQ9UBI9 543 aaPredicted RBP12.53□□□□□ -0.4
TRIM59-207ENST00000496222 LHX3Q9UBR4 397 aa12.53□□□□□ -0.4
TRIM59-207ENST00000496222 ANAPC7Q9UJX3 599 aa12.53□□□□□ -0.4
TRIM59-207ENST00000496222 TPX2Q9ULW0 747 aaKnown RBP12.53□□□□□ -0.4
TRIM59-207ENST00000496222 HPCAL4Q9UM19 191 aa12.53□□□□□ -0.4
TRIM59-207ENST00000496222 ZFR2Q9UPR6 939 aaKnown RBP12.53□□□□□ -0.4
TRIM59-207ENST00000496222 SPINT1O43278 529 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms