RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.04□□□□□ -1.28
USP39-219ENST00000496047 RBM22Q9NW64 420 aaKnown RBP eCLIP7.04□□□□□ -1.28
USP39-219ENST00000496047 MARCH5Q9NX47 278 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 IL37Q9NZH6 218 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 TRPM5Q9NZQ8 1165 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 AFF4Q9UHB7 1163 aaKnown RBP7.04□□□□□ -1.28
USP39-219ENST00000496047 DNMT3LQ9UJW3 386 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 MAFFQ9ULX9 164 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 MAGED2Q9UNF1 606 aaPredicted RBP7.04□□□□□ -1.28
USP39-219ENST00000496047 ANKRD6Q9Y2G4 727 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 CDY1Q9Y6F8 540 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 CAPN7Q9Y6W3 813 aa7.04□□□□□ -1.28
USP39-219ENST00000496047 SCN8AQ9UQD0 1980 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 HEATR9A2RTY3 570 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 F8W810 466 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 KLF11O14901 512 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 DNAJC8O75937 253 aaPredicted RBP7.03□□□□□ -1.28
USP39-219ENST00000496047 UPP2O95045 317 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 TGDSO95455 350 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 IL1BP01584 269 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 SOD2P04179 222 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 ITGA2BP08514 1039 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 CLTBP09497 229 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 IGFBP6P24592 240 aaPredicted RBP7.03□□□□□ -1.28
USP39-219ENST00000496047 ADRA1DP25100 572 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 CRHR1P34998 444 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 SKIV2L2P42285 1042 aaKnown RBP7.03□□□□□ -1.28
USP39-219ENST00000496047 SERPINB4P48594 390 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 GPR15P49685 360 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 LIG3P49916 1009 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 PAPOLAP51003 745 aaKnown RBP7.03□□□□□ -1.28
USP39-219ENST00000496047 LIMK2P53671 638 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 PRKAA2P54646 552 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 SLC12A2P55011 1212 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 CCL23P55773 120 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 WDR4P57081 412 aaKnown RBP7.03□□□□□ -1.28
USP39-219ENST00000496047 TMPRSS15P98073 1019 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 CAP1Q01518 475 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 ACTN3Q08043 901 aaPredicted RBP7.03□□□□□ -1.28
USP39-219ENST00000496047 IL10RBQ08334 325 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 EIF4EBP2Q13542 120 aaPredicted RBP7.03□□□□□ -1.28
USP39-219ENST00000496047 POLD3Q15054 466 aaPredicted RBP7.03□□□□□ -1.28
USP39-219ENST00000496047 SLC1A5Q15758 541 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 MS4A13Q5J8X5 152 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 SPDYAQ5MJ70 313 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 HECTD3Q5T447 861 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 MROH9Q5TGP6 573 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 SDHAF4Q5VUM1 108 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 KCTD11Q693B1 232 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 SLC8B1Q6J4K2 584 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 KLHDC10Q6PID8 442 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 PRPF39Q86UA1 669 aaKnown RBP7.03□□□□□ -1.28
USP39-219ENST00000496047 MIB1Q86YT6 1006 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 CRLF3Q8IUI8 442 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 NUDCD3Q8IVD9 361 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 HERC6Q8IVU3 1022 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 LMNTD2Q8IXW0 634 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 CMTR2Q8IYT2 770 aaKnown RBP7.03□□□□□ -1.28
USP39-219ENST00000496047 ATAD1Q8NBU5 361 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 IPMKQ8NFU5 416 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 FAM174AQ8TBP5 190 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 PBXIP1Q96AQ6 731 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 E2F7Q96AV8 911 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 PABPC5Q96DU9 382 aaKnown RBP7.03□□□□□ -1.28
USP39-219ENST00000496047 IFT43Q96FT9 208 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 SLC39A13Q96H72 371 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 SCLYQ96I15 445 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 ZNF599Q96NL3 588 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 LRRC37BQ96QE4 947 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 GCNAQ96QF7 691 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 KLF6Q99612 283 aaPredicted RBP7.03□□□□□ -1.28
USP39-219ENST00000496047 RBBP8Q99708 897 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 FICDQ9BVA6 458 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 TTLL2Q9BWV7 592 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 GPR62Q9BZJ7 368 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 SLC39A8Q9C0K1 460 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 POLR1EQ9GZS1 481 aaKnown RBP7.03□□□□□ -1.28
USP39-219ENST00000496047 WWP1Q9H0M0 922 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 SLC25A51Q9H1U9 297 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 TMEM39AQ9NV64 488 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 MOCS1Q9NZB8 636 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 TLK1Q9UKI8 766 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 ATP11BQ9Y2G3 1177 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 MTO1Q9Y2Z2 717 aaKnown RBP7.03□□□□□ -1.28
USP39-219ENST00000496047 PLLPQ9Y342 182 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 SNX10Q9Y5X0 201 aa7.03□□□□□ -1.28
USP39-219ENST00000496047 ANKRD12Q6UB98 2062 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 IGLV3-10A0A075B6K4 115 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.02□□□□□ -1.29
USP39-219ENST00000496047 WDR91A4D1P6 747 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 NT5C1B-RDH14C9J2C7 533 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 PRRG1O14668 218 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 TPP1O14773 563 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 PFDN6O15212 129 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 CACNG3O60359 315 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 ACSL4O60488 711 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 B4GALT3O60512 393 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 MAFKO60675 156 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 BAIAP3O94812 1187 aa7.02□□□□□ -1.29
USP39-219ENST00000496047 LATS1O95835 1130 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms