RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 VPS45Q9NRW7 570 aa10.44□□□□□ -0.74
HDAC3-214ENST00000495485 RBM22Q9NW64 420 aaKnown RBP eCLIP10.44□□□□□ -0.741e-6■■■□□ 15.8
HDAC3-214ENST00000495485 NSMCE4AQ9NXX6 385 aa10.44□□□□□ -0.74
HDAC3-214ENST00000495485 MPP6Q9NZW5 540 aa10.44□□□□□ -0.74
HDAC3-214ENST00000495485 TXNDC16Q9P2K2 825 aa10.44□□□□□ -0.74
HDAC3-214ENST00000495485 TBK1Q9UHD2 729 aa10.44□□□□□ -0.74
HDAC3-214ENST00000495485 NEU3Q9UQ49 428 aa10.44□□□□□ -0.74
HDAC3-214ENST00000495485 HELZP42694 1942 aaKnown RBP10.44□□□□□ -0.74
HDAC3-214ENST00000495485 ZDBF2Q9HCK1 2354 aa10.44□□□□□ -0.74
HDAC3-214ENST00000495485 TCRBV9S1A1TA0A576 114 aa10.43□□□□□ -0.74
HDAC3-214ENST00000495485 CACNG3O60359 315 aa10.43□□□□□ -0.74
HDAC3-214ENST00000495485 OAS1P00973 400 aaKnown RBP10.43□□□□□ -0.74
HDAC3-214ENST00000495485 MT-ND3P03897 115 aa10.43□□□□□ -0.74
HDAC3-214ENST00000495485 LAMP2P13473 410 aa10.43□□□□□ -0.74
HDAC3-214ENST00000495485 IL9P15248 144 aa10.43□□□□□ -0.74
HDAC3-214ENST00000495485 PAMP19021 973 aa10.43□□□□□ -0.74
HDAC3-214ENST00000495485 HDCP19113 662 aa10.43□□□□□ -0.74
HDAC3-214ENST00000495485 NFKB1P19838 968 aa10.43□□□□□ -0.74
HDAC3-214ENST00000495485 PRKCHP24723 683 aa10.43□□□□□ -0.74
HDAC3-214ENST00000495485 GABRR2P28476 465 aa10.43□□□□□ -0.74
HDAC3-214ENST00000495485 KCNQ1P51787 676 aa10.43□□□□□ -0.74
HDAC3-214ENST00000495485 IL9RQ01113 521 aa10.43□□□□□ -0.74
HDAC3-214ENST00000495485 TNK2Q07912 1038 aa10.43□□□□□ -0.74
HDAC3-214ENST00000495485 DNAJC3Q13217 504 aa10.43□□□□□ -0.74
HDAC3-214ENST00000495485 SERINC3Q13530 473 aa10.43□□□□□ -0.74
HDAC3-214ENST00000495485 FRG1Q14331 258 aaKnown RBP10.43□□□□□ -0.74
HDAC3-214ENST00000495485 RFTN1Q14699 578 aaPredicted RBP10.43□□□□□ -0.74
HDAC3-214ENST00000495485 STEAP4Q687X5 459 aa10.43□□□□□ -0.74
HDAC3-214ENST00000495485 POTEHQ6S545 545 aa10.43□□□□□ -0.74
HDAC3-214ENST00000495485 C14orf80Q86SX3 495 aa10.43□□□□□ -0.74
HDAC3-214ENST00000495485 SRRM1Q8IYB3 904 aaKnown RBP10.43□□□□□ -0.74
HDAC3-214ENST00000495485 GJD3Q8N144 294 aa10.43□□□□□ -0.74
HDAC3-214ENST00000495485 ADAMTS19Q8TE59 1207 aa10.43□□□□□ -0.74
HDAC3-214ENST00000495485 DEPDC1BQ8WUY9 529 aa10.43□□□□□ -0.74
HDAC3-214ENST00000495485 PTCD2Q8WV60 388 aaKnown RBP10.43□□□□□ -0.74
HDAC3-214ENST00000495485 MAML1Q92585 1016 aa10.43□□□□□ -0.74
HDAC3-214ENST00000495485 FGF13Q92913 245 aa10.43□□□□□ -0.74
HDAC3-214ENST00000495485 UHRF1Q96T88 793 aaPredicted RBP10.43□□□□□ -0.74
HDAC3-214ENST00000495485 TBL1YQ9BQ87 522 aa10.43□□□□□ -0.74
HDAC3-214ENST00000495485 KLF16Q9BXK1 252 aaPredicted RBP10.43□□□□□ -0.74
HDAC3-214ENST00000495485 NSRP1Q9H0G5 558 aaKnown RBP10.43□□□□□ -0.74
HDAC3-214ENST00000495485 SLC25A51Q9H1U9 297 aa10.43□□□□□ -0.74
HDAC3-214ENST00000495485 EPN3Q9H201 632 aa10.43□□□□□ -0.74
HDAC3-214ENST00000495485 TASP1Q9H6P5 420 aa10.43□□□□□ -0.74
HDAC3-214ENST00000495485 CASS4Q9NQ75 786 aa10.43□□□□□ -0.74
HDAC3-214ENST00000495485 TRAV19A0A0A6YYK7 116 aa10.42□□□□□ -0.74
HDAC3-214ENST00000495485 A0A1B0GVM2 712 aa10.42□□□□□ -0.74
HDAC3-214ENST00000495485 ILVBLA1L0T0 632 aa10.42□□□□□ -0.74
HDAC3-214ENST00000495485 GMNCA6NCL1 334 aa10.42□□□□□ -0.74
HDAC3-214ENST00000495485 TCAF2A6NFQ2 919 aa10.42□□□□□ -0.74
HDAC3-214ENST00000495485 PRPF4O43172 522 aaKnown RBP eCLIP10.42□□□□□ -0.74
HDAC3-214ENST00000495485 AVILO75366 819 aa10.42□□□□□ -0.74
HDAC3-214ENST00000495485 ECI2O75521 394 aa10.42□□□□□ -0.74
HDAC3-214ENST00000495485 STC2O76061 302 aa10.42□□□□□ -0.74
HDAC3-214ENST00000495485 ZWINTO95229 277 aa10.42□□□□□ -0.74
HDAC3-214ENST00000495485 F11P03951 625 aa10.42□□□□□ -0.74
HDAC3-214ENST00000495485 SNRPAP09012 282 aaKnown RBP10.42□□□□□ -0.74
HDAC3-214ENST00000495485 MYL4P12829 197 aa10.42□□□□□ -0.74
HDAC3-214ENST00000495485 CHN1P15882 459 aa10.42□□□□□ -0.74
HDAC3-214ENST00000495485 TCF3P15923 654 aa10.42□□□□□ -0.74
HDAC3-214ENST00000495485 CORO1AP31146 461 aaKnown RBP10.42□□□□□ -0.74
HDAC3-214ENST00000495485 LSP1P33241 339 aa10.42□□□□□ -0.74
HDAC3-214ENST00000495485 SESN2P58004 480 aaPredicted RBP10.42□□□□□ -0.74
HDAC3-214ENST00000495485 GUCY1A3Q02108 690 aa10.42□□□□□ -0.74
HDAC3-214ENST00000495485 GAD2Q05329 585 aa10.42□□□□□ -0.74
HDAC3-214ENST00000495485 ITKQ08881 620 aa10.42□□□□□ -0.74
HDAC3-214ENST00000495485 ZBTB17Q13105 803 aa10.42□□□□□ -0.74
HDAC3-214ENST00000495485 ZNF235Q14590 738 aa10.42□□□□□ -0.74
HDAC3-214ENST00000495485 KBTBD12Q3ZCT8 623 aa10.42□□□□□ -0.74
HDAC3-214ENST00000495485 SYCP2LQ5T4T6 812 aa10.42□□□□□ -0.74
HDAC3-214ENST00000495485 KCTD11Q693B1 232 aa10.42□□□□□ -0.74
HDAC3-214ENST00000495485 MICALCLQ6ZW33 695 aa10.42□□□□□ -0.74
HDAC3-214ENST00000495485 GET4Q7L5D6 327 aaPredicted RBP10.42□□□□□ -0.74
HDAC3-214ENST00000495485 TFAP2DQ7Z6R9 452 aa10.42□□□□□ -0.74
HDAC3-214ENST00000495485 TRABD2AQ86V40 505 aa10.42□□□□□ -0.74
HDAC3-214ENST00000495485 SPATS2Q86XZ4 545 aaKnown RBP10.42□□□□□ -0.74
HDAC3-214ENST00000495485 DENND1CQ8IV53 801 aa10.42□□□□□ -0.74
HDAC3-214ENST00000495485 NPAS3Q8IXF0 933 aa10.42□□□□□ -0.74
HDAC3-214ENST00000495485 KLHDC8BQ8IXV7 354 aa10.42□□□□□ -0.74
HDAC3-214ENST00000495485 UBALD2Q8IYN6 164 aa10.42□□□□□ -0.74
HDAC3-214ENST00000495485 PPHLN1Q8NEY8 458 aaKnown RBP10.42□□□□□ -0.74
HDAC3-214ENST00000495485 BCAS4Q8TDM0 211 aa10.42□□□□□ -0.74
HDAC3-214ENST00000495485 LRRN4Q8WUT4 740 aa10.42□□□□□ -0.74
HDAC3-214ENST00000495485 SLC44A1Q8WWI5 657 aa10.42□□□□□ -0.74
HDAC3-214ENST00000495485 SMARCD2Q92925 531 aa10.42□□□□□ -0.74
HDAC3-214ENST00000495485 DHRS4Q9BTZ2 278 aa10.42□□□□□ -0.74
HDAC3-214ENST00000495485 APOL5Q9BWW9 433 aa10.42□□□□□ -0.74
HDAC3-214ENST00000495485 CEP41Q9BYV8 373 aa10.42□□□□□ -0.74
HDAC3-214ENST00000495485 IQCGQ9H095 443 aaKnown RBP10.42□□□□□ -0.74
HDAC3-214ENST00000495485 ATXN3LQ9H3M9 355 aa10.42□□□□□ -0.74
HDAC3-214ENST00000495485 TRABDQ9H4I3 376 aa10.42□□□□□ -0.74
HDAC3-214ENST00000495485 IL21Q9HBE4 155 aa10.42□□□□□ -0.74
HDAC3-214ENST00000495485 TRPC7Q9HCX4 862 aa10.42□□□□□ -0.74
HDAC3-214ENST00000495485 SH3BP1Q9Y3L3 701 aa10.42□□□□□ -0.74
HDAC3-214ENST00000495485 TTLL3Q9Y4R7 772 aa10.42□□□□□ -0.74
HDAC3-214ENST00000495485 FAM237BA0A1B0GVD1 139 aa10.41□□□□□ -0.74
HDAC3-214ENST00000495485 TMEM120BA0PK00 339 aa10.41□□□□□ -0.74
HDAC3-214ENST00000495485 FAM47DPA6NHR8 397 aa10.41□□□□□ -0.74
HDAC3-214ENST00000495485 ANHXE9PGG2 379 aa10.41□□□□□ -0.74
HDAC3-214ENST00000495485 TM9SF1O15321 606 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms