RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 LRRC69Q6ZNQ3 347 aa22.52■■□□□ 1.2
HDDC3-203ENST00000494993 DRC7Q8IY82 874 aa22.52■■□□□ 1.2
HDDC3-203ENST00000494993 SLC22A18ASQ8N1D0 253 aa22.52■■□□□ 1.2
HDDC3-203ENST00000494993 FAM174AQ8TBP5 190 aa22.52■■□□□ 1.2
HDDC3-203ENST00000494993 IFT43Q96FT9 208 aa22.52■■□□□ 1.2
HDDC3-203ENST00000494993 HEPHQ9BQS7 1158 aa22.52■■□□□ 1.2
HDDC3-203ENST00000494993 STK33Q9BYT3 514 aa22.52■■□□□ 1.2
HDDC3-203ENST00000494993 METTL5Q9NRN9 209 aaKnown RBP22.52■■□□□ 1.2
HDDC3-203ENST00000494993 A6NNZ2 444 aa22.51■■□□□ 1.19
HDDC3-203ENST00000494993 L1CAMP32004 1257 aa22.51■■□□□ 1.19
HDDC3-203ENST00000494993 DNA2P51530 1060 aa22.51■■□□□ 1.19
HDDC3-203ENST00000494993 CCNHP51946 323 aaPredicted RBP22.51■■□□□ 1.19
HDDC3-203ENST00000494993 RPS21P63220 83 aaKnown RBP22.51■■□□□ 1.19
HDDC3-203ENST00000494993 CARD16Q5EG05 197 aa22.51■■□□□ 1.19
HDDC3-203ENST00000494993 KIAA1161Q6NSJ0 714 aa22.51■■□□□ 1.19
HDDC3-203ENST00000494993 PTAR1Q7Z6K3 402 aaPredicted RBP22.51■■□□□ 1.19
HDDC3-203ENST00000494993 DCP2Q8IU60 420 aaKnown RBP22.51■■□□□ 1.19
HDDC3-203ENST00000494993 EMC1Q8N766 993 aa22.51■■□□□ 1.19
HDDC3-203ENST00000494993 SNIP1Q8TAD8 396 aaKnown RBP22.51■■□□□ 1.19
HDDC3-203ENST00000494993 SLC17A9Q9BYT1 436 aa22.51■■□□□ 1.19
HDDC3-203ENST00000494993 CAAP1Q9H8G2 361 aa22.51■■□□□ 1.19
HDDC3-203ENST00000494993 SAMSN1Q9NSI8 373 aaKnown RBP22.51■■□□□ 1.19
HDDC3-203ENST00000494993 FCF1Q9Y324 198 aaKnown RBP22.51■■□□□ 1.19
HDDC3-203ENST00000494993 FADS3Q9Y5Q0 445 aa22.51■■□□□ 1.19
HDDC3-203ENST00000494993 HS3ST3A1Q9Y663 406 aa22.51■■□□□ 1.19
HDDC3-203ENST00000494993 MT-CO3P00414 261 aa22.5■■□□□ 1.19
HDDC3-203ENST00000494993 ALPPL2P10696 532 aa22.5■■□□□ 1.19
HDDC3-203ENST00000494993 ATP11AP98196 1134 aa22.5■■□□□ 1.19
HDDC3-203ENST00000494993 MAPK8IP2Q13387 824 aaPredicted RBP22.5■■□□□ 1.19
HDDC3-203ENST00000494993 FGL2Q14314 439 aa22.5■■□□□ 1.19
HDDC3-203ENST00000494993 KYAT3Q6YP21 454 aaKnown RBP22.5■■□□□ 1.19
HDDC3-203ENST00000494993 Q6ZSR6 202 aa22.5■■□□□ 1.19
HDDC3-203ENST00000494993 TMC6Q7Z403 805 aa22.5■■□□□ 1.19
HDDC3-203ENST00000494993 FEM1CQ96JP0 617 aa22.5■■□□□ 1.19
HDDC3-203ENST00000494993 BMFQ96LC9 184 aa22.5■■□□□ 1.19
HDDC3-203ENST00000494993 GPR27Q9NS67 375 aa22.5■■□□□ 1.19
HDDC3-203ENST00000494993 NLGN3Q9NZ94 848 aa22.5■■□□□ 1.19
HDDC3-203ENST00000494993 ACTL7AQ9Y615 435 aa22.5■■□□□ 1.19
HDDC3-203ENST00000494993 RRP8O43159 456 aaKnown RBP22.49■■□□□ 1.19
HDDC3-203ENST00000494993 AP1G1O43747 822 aa22.49■■□□□ 1.19
HDDC3-203ENST00000494993 BRINP1O60477 761 aa22.49■■□□□ 1.19
HDDC3-203ENST00000494993 CD160O95971 181 aa22.49■■□□□ 1.19
HDDC3-203ENST00000494993 CKMT1AP12532 417 aa22.49■■□□□ 1.19
HDDC3-203ENST00000494993 NRG1Q02297 640 aaPredicted RBP22.49■■□□□ 1.19
HDDC3-203ENST00000494993 RAB6CQ53S08 254 aa22.49■■□□□ 1.19
HDDC3-203ENST00000494993 TCP11X2Q5H9J9 407 aa22.49■■□□□ 1.19
HDDC3-203ENST00000494993 MANEALQ5VSG8 457 aa22.49■■□□□ 1.19
HDDC3-203ENST00000494993 KDM7AQ6ZMT4 941 aa22.49■■□□□ 1.19
HDDC3-203ENST00000494993 PARS2Q7L3T8 475 aaKnown RBP22.49■■□□□ 1.19
HDDC3-203ENST00000494993 ZNF677Q86XU0 584 aa22.49■■□□□ 1.19
HDDC3-203ENST00000494993 BAP1Q92560 729 aa22.49■■□□□ 1.19
HDDC3-203ENST00000494993 RAB6CQ9H0N0 254 aa22.49■■□□□ 1.19
HDDC3-203ENST00000494993 ZDHHC6Q9H6R6 413 aa22.49■■□□□ 1.19
HDDC3-203ENST00000494993 DNAJC28Q9NX36 388 aa22.49■■□□□ 1.19
HDDC3-203ENST00000494993 NOCTQ9UK39 431 aaKnown RBP22.49■■□□□ 1.19
HDDC3-203ENST00000494993 COL27A1Q8IZC6 1860 aaPredicted RBP22.48■■□□□ 1.19
HDDC3-203ENST00000494993 CXorf51AA0A1B0GTR3 108 aa22.48■■□□□ 1.19
HDDC3-203ENST00000494993 POM121BA6NF01 834 aa22.48■■□□□ 1.19
HDDC3-203ENST00000494993 EIF4E1BA6NMX2 242 aaKnown RBP22.48■■□□□ 1.19
HDDC3-203ENST00000494993 PAK4O96013 591 aaPredicted RBP22.48■■□□□ 1.19
HDDC3-203ENST00000494993 EEF1GP26641 437 aaKnown RBP22.48■■□□□ 1.19
HDDC3-203ENST00000494993 ACVRL1P37023 503 aa22.48■■□□□ 1.19
HDDC3-203ENST00000494993 ETFBP38117 255 aa22.48■■□□□ 1.19
HDDC3-203ENST00000494993 CDO1Q16878 200 aa22.48■■□□□ 1.19
HDDC3-203ENST00000494993 C15orf59Q2T9L4 293 aaPredicted RBP22.48■■□□□ 1.19
HDDC3-203ENST00000494993 ZNF542PQ5EBM4 170 aa22.48■■□□□ 1.19
HDDC3-203ENST00000494993 ZSCAN30Q86W11 494 aa22.48■■□□□ 1.19
HDDC3-203ENST00000494993 PLPP6Q8IY26 295 aa22.48■■□□□ 1.19
HDDC3-203ENST00000494993 SLC20A1Q8WUM9 679 aa22.48■■□□□ 1.19
HDDC3-203ENST00000494993 FGF11Q92914 225 aa22.48■■□□□ 1.19
HDDC3-203ENST00000494993 ISG20Q96AZ6 181 aaKnown RBP22.48■■□□□ 1.19
HDDC3-203ENST00000494993 APOLD1Q96LR9 279 aa22.48■■□□□ 1.19
HDDC3-203ENST00000494993 UBL7Q96S82 380 aaPredicted RBP22.48■■□□□ 1.19
HDDC3-203ENST00000494993 TM6SF2Q9BZW4 377 aa22.48■■□□□ 1.19
HDDC3-203ENST00000494993 GANQ9H2C0 597 aa22.48■■□□□ 1.19
HDDC3-203ENST00000494993 NDFIP2Q9NV92 336 aa22.48■■□□□ 1.19
HDDC3-203ENST00000494993 HECAQ9UBI9 543 aaPredicted RBP22.48■■□□□ 1.19
HDDC3-203ENST00000494993 OR12D3Q9UGF7 316 aa22.48■■□□□ 1.19
HDDC3-203ENST00000494993 LRRK1Q38SD2 2015 aa22.48■■□□□ 1.19
HDDC3-203ENST00000494993 RP1P56715 2156 aa22.48■■□□□ 1.19
HDDC3-203ENST00000494993 NEMP2A6NFY4 417 aa22.47■■□□□ 1.19
HDDC3-203ENST00000494993 SCAMP1O15126 338 aa22.47■■□□□ 1.19
HDDC3-203ENST00000494993 RAD51BO15315 384 aa22.47■■□□□ 1.19
HDDC3-203ENST00000494993 CYP1A1P04798 512 aaPredicted RBP22.47■■□□□ 1.19
HDDC3-203ENST00000494993 MMP8P22894 467 aa22.47■■□□□ 1.19
HDDC3-203ENST00000494993 ADRA1BP35368 520 aa22.47■■□□□ 1.19
HDDC3-203ENST00000494993 ACTN2P35609 894 aa22.47■■□□□ 1.19
HDDC3-203ENST00000494993 MAPKAPK2P49137 400 aa22.47■■□□□ 1.19
HDDC3-203ENST00000494993 HNRNPKP61978 463 aaKnown RBP eCLIP22.47■■□□□ 1.19
HDDC3-203ENST00000494993 FZD2Q14332 565 aa22.47■■□□□ 1.19
HDDC3-203ENST00000494993 ARL13BQ3SXY8 428 aa22.47■■□□□ 1.19
HDDC3-203ENST00000494993 NLRP14Q86W24 1093 aa22.47■■□□□ 1.19
HDDC3-203ENST00000494993 RXFP2Q8WXD0 754 aa22.47■■□□□ 1.19
HDDC3-203ENST00000494993 ARHGEF2Q92974 986 aaKnown RBP22.47■■□□□ 1.19
HDDC3-203ENST00000494993 NUP62CLQ9H1M0 184 aa22.47■■□□□ 1.19
HDDC3-203ENST00000494993 PRORYQ9H606 182 aa22.47■■□□□ 1.19
HDDC3-203ENST00000494993 RETREG1Q9H6L5 497 aa22.47■■□□□ 1.19
HDDC3-203ENST00000494993 TAB2Q9NYJ8 693 aa22.47■■□□□ 1.19
HDDC3-203ENST00000494993 CHMP5Q9NZZ3 219 aa22.47■■□□□ 1.19
HDDC3-203ENST00000494993 PCDHB1Q9Y5F3 818 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms