RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	SARNP	P82979	210 aa	Known RBP	13.76	□□□□□ -0.21
APTX-231	ENST00000494973	CDK16	Q00536	496 aa		13.76	□□□□□ -0.21
APTX-231	ENST00000494973	CAV1	Q03135	178 aa		13.76	□□□□□ -0.21
APTX-231	ENST00000494973	SLC10A7	Q0GE19	358 aa		13.76	□□□□□ -0.21
APTX-231	ENST00000494973	GPS1	Q13098	491 aa		13.76	□□□□□ -0.21
APTX-231	ENST00000494973	ZBTB17	Q13105	803 aa		13.76	□□□□□ -0.21
APTX-231	ENST00000494973	FNDC3B	Q53EP0	1204 aa	Known RBP	13.76	□□□□□ -0.21
APTX-231	ENST00000494973	DGKK	Q5KSL6	1271 aa		13.76	□□□□□ -0.21
APTX-231	ENST00000494973	SDE2	Q6IQ49	451 aa		13.76	□□□□□ -0.21
APTX-231	ENST00000494973	SERPINA13P	Q6UXR4	307 aa		13.76	□□□□□ -0.21
APTX-231	ENST00000494973	CEP128	Q6ZU80	1094 aa		13.76	□□□□□ -0.21
APTX-231	ENST00000494973	IFT20	Q8IY31	132 aa		13.76	□□□□□ -0.21
APTX-231	ENST00000494973	SYNPO	Q8N3V7	929 aa		13.76	□□□□□ -0.21
APTX-231	ENST00000494973	CCDC110	Q8TBZ0	833 aa		13.76	□□□□□ -0.21
APTX-231	ENST00000494973	SNF8	Q96H20	258 aa		13.76	□□□□□ -0.21
APTX-231	ENST00000494973	LRIG1	Q96JA1	1093 aa		13.76	□□□□□ -0.21
APTX-231	ENST00000494973	AGAP3	Q96P47	875 aa		13.76	□□□□□ -0.21
APTX-231	ENST00000494973	FRMD8	Q9BZ67	464 aa	Predicted RBP	13.76	□□□□□ -0.21
APTX-231	ENST00000494973	FBRS	Q9HAH7	460 aa		13.76	□□□□□ -0.21
APTX-231	ENST00000494973	GLOD4	Q9HC38	313 aa		13.76	□□□□□ -0.21
APTX-231	ENST00000494973	NT5M	Q9NPB1	228 aa		13.76	□□□□□ -0.21
APTX-231	ENST00000494973	EIF2B3	Q9NR50	452 aa	Known RBP	13.76	□□□□□ -0.21
APTX-231	ENST00000494973	FAM114A2	Q9NRY5	505 aa		13.76	□□□□□ -0.21
APTX-231	ENST00000494973	THAP10	Q9P2Z0	257 aa	Predicted RBP	13.76	□□□□□ -0.21
APTX-231	ENST00000494973	SUN2	Q9UH99	717 aa		13.76	□□□□□ -0.21
APTX-231	ENST00000494973	NEU2	Q9Y3R4	380 aa		13.76	□□□□□ -0.21
APTX-231	ENST00000494973	TTLL3	Q9Y4R7	772 aa		13.76	□□□□□ -0.21
APTX-231	ENST00000494973	EDDM13	A0A1B0GTR0	161 aa		13.75	□□□□□ -0.21
APTX-231	ENST00000494973	PRRT4	C9JH25	899 aa		13.75	□□□□□ -0.21
APTX-231	ENST00000494973	ALOX15B	O15296	676 aa		13.75	□□□□□ -0.21
APTX-231	ENST00000494973	ZBTB24	O43167	697 aa	Predicted RBP	13.75	□□□□□ -0.21
APTX-231	ENST00000494973	HLA-DQB2	P05538	268 aa		13.75	□□□□□ -0.21
APTX-231	ENST00000494973	SERPINF2	P08697	491 aa		13.75	□□□□□ -0.21
APTX-231	ENST00000494973	ITIH2	P19823	946 aa		13.75	□□□□□ -0.21
APTX-231	ENST00000494973	RPL22	P35268	128 aa	Known RBP	13.75	□□□□□ -0.21
APTX-231	ENST00000494973	SOX9	P48436	509 aa		13.75	□□□□□ -0.21
APTX-231	ENST00000494973	LMAN1	P49257	510 aa		13.75	□□□□□ -0.21
APTX-231	ENST00000494973	BASP1	P80723	227 aa	Known RBP	13.75	□□□□□ -0.21
APTX-231	ENST00000494973	ITK	Q08881	620 aa		13.75	□□□□□ -0.21
APTX-231	ENST00000494973	MPP3	Q13368	585 aa		13.75	□□□□□ -0.21
APTX-231	ENST00000494973	CUL1	Q13616	776 aa		13.75	□□□□□ -0.21
APTX-231	ENST00000494973	ACCSL	Q4AC99	568 aa		13.75	□□□□□ -0.21
APTX-231	ENST00000494973	LINGO4	Q6UY18	593 aa		13.75	□□□□□ -0.21
APTX-231	ENST00000494973	PPP1R21	Q6ZMI0	780 aa		13.75	□□□□□ -0.21
APTX-231	ENST00000494973	DSG4	Q86SJ6	1040 aa		13.75	□□□□□ -0.21
APTX-231	ENST00000494973	HOOK3	Q86VS8	718 aa		13.75	□□□□□ -0.21
APTX-231	ENST00000494973	EIF1AD	Q8N9N8	165 aa	Known RBP	13.75	□□□□□ -0.21
APTX-231	ENST00000494973	OR2AP1	Q8NGE2	309 aa		13.75	□□□□□ -0.21
APTX-231	ENST00000494973	USP33	Q8TEY7	942 aa		13.75	□□□□□ -0.21
APTX-231	ENST00000494973	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
APTX-231	ENST00000494973	CHFR	Q96EP1	664 aa		13.75	□□□□□ -0.21
APTX-231	ENST00000494973	NUDCD1	Q96RS6	583 aa		13.75	□□□□□ -0.21
APTX-231	ENST00000494973	TUBGCP5	Q96RT8	1024 aa		13.75	□□□□□ -0.21
APTX-231	ENST00000494973	LRRC1	Q9BTT6	524 aa		13.75	□□□□□ -0.21
APTX-231	ENST00000494973	SCUBE2	Q9NQ36	999 aa		13.75	□□□□□ -0.21
APTX-231	ENST00000494973	RAB6B	Q9NRW1	208 aa		13.75	□□□□□ -0.21
APTX-231	ENST00000494973	WHRN	Q9P202	907 aa		13.75	□□□□□ -0.21
APTX-231	ENST00000494973	SHOC2	Q9UQ13	582 aa		13.75	□□□□□ -0.21
APTX-231	ENST00000494973	F5	P12259	2224 aa		13.75	□□□□□ -0.21
APTX-231	ENST00000494973	DNALI1	O14645	258 aa	Predicted RBP	13.74	□□□□□ -0.21
APTX-231	ENST00000494973	TRIM24	O15164	1050 aa		13.74	□□□□□ -0.21
APTX-231	ENST00000494973	INSIG1	O15503	277 aa		13.74	□□□□□ -0.21
APTX-231	ENST00000494973	NFKB1	P19838	968 aa		13.74	□□□□□ -0.21
APTX-231	ENST00000494973	TPSB2	P20231	275 aa		13.74	□□□□□ -0.21
APTX-231	ENST00000494973	NFKBIA	P25963	317 aa		13.74	□□□□□ -0.21
APTX-231	ENST00000494973	MAGEA6	P43360	314 aa		13.74	□□□□□ -0.21
APTX-231	ENST00000494973	SEMA5A	Q13591	1074 aa		13.74	□□□□□ -0.21
APTX-231	ENST00000494973	STARD3	Q14849	445 aa		13.74	□□□□□ -0.21
APTX-231	ENST00000494973	MORF4L2	Q15014	288 aa		13.74	□□□□□ -0.21
APTX-231	ENST00000494973	PON2	Q15165	354 aa		13.74	□□□□□ -0.21
APTX-231	ENST00000494973	CYTH1	Q15438	398 aa		13.74	□□□□□ -0.21
APTX-231	ENST00000494973	TPSAB1	Q15661	275 aa		13.74	□□□□□ -0.21
APTX-231	ENST00000494973	DLG2	Q15700	870 aa		13.74	□□□□□ -0.21
APTX-231	ENST00000494973	PTPRN	Q16849	979 aa		13.74	□□□□□ -0.21
APTX-231	ENST00000494973	CARD16	Q5EG05	197 aa		13.74	□□□□□ -0.21
APTX-231	ENST00000494973	TMEM215	Q68D42	235 aa		13.74	□□□□□ -0.21
APTX-231	ENST00000494973	DUPD1	Q68J44	220 aa		13.74	□□□□□ -0.21
APTX-231	ENST00000494973	NAPEPLD	Q6IQ20	393 aa		13.74	□□□□□ -0.21
APTX-231	ENST00000494973	LINC00523	Q86TU6	105 aa		13.74	□□□□□ -0.21
APTX-231	ENST00000494973	PPIL6	Q8IXY8	311 aa		13.74	□□□□□ -0.21
APTX-231	ENST00000494973	CNTD1	Q8N815	330 aa		13.74	□□□□□ -0.21
APTX-231	ENST00000494973	ZNF513	Q8N8E2	541 aa	Predicted RBP	13.74	□□□□□ -0.21
APTX-231	ENST00000494973	SEC14L1	Q92503	715 aa		13.74	□□□□□ -0.21
APTX-231	ENST00000494973	IMP4	Q96G21	291 aa	Known RBP	13.74	□□□□□ -0.21
APTX-231	ENST00000494973	RPL10L	Q96L21	214 aa	Known RBP	13.74	□□□□□ -0.21
APTX-231	ENST00000494973	MRGPRX3	Q96LB0	322 aa		13.74	□□□□□ -0.21
APTX-231	ENST00000494973	SEMA3C	Q99985	751 aa		13.74	□□□□□ -0.21
APTX-231	ENST00000494973	IER2	Q9BTL4	223 aa		13.74	□□□□□ -0.21
APTX-231	ENST00000494973	OSBPL1A	Q9BXW6	950 aa		13.74	□□□□□ -0.21
APTX-231	ENST00000494973	FOXP3	Q9BZS1	431 aa		13.74	□□□□□ -0.21
APTX-231	ENST00000494973	TSPYL1	Q9H0U9	437 aa		13.74	□□□□□ -0.21
APTX-231	ENST00000494973	C10orf88	Q9H8K7	445 aa		13.74	□□□□□ -0.21
APTX-231	ENST00000494973	LRRC40	Q9H9A6	602 aa		13.74	□□□□□ -0.21
APTX-231	ENST00000494973	LHX3	Q9UBR4	397 aa		13.74	□□□□□ -0.21
APTX-231	ENST00000494973	FAM153A	Q9UHL3	310 aa		13.74	□□□□□ -0.21
APTX-231	ENST00000494973	TPX2	Q9ULW0	747 aa	Known RBP	13.74	□□□□□ -0.21
APTX-231	ENST00000494973	FCF1	Q9Y324	198 aa	Known RBP	13.74	□□□□□ -0.21
APTX-231	ENST00000494973	ARIH1	Q9Y4X5	557 aa	Predicted RBP	13.74	□□□□□ -0.21
APTX-231	ENST00000494973	SOCS5	O75159	536 aa		13.73	□□□□□ -0.21
APTX-231	ENST00000494973	POP4	O95707	220 aa	Known RBP	13.73	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms