RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 POMKQ9H5K3 350 aa11.21□□□□□ -0.61
PKP4-215ENST00000494945 VPS45Q9NRW7 570 aa11.21□□□□□ -0.61
PKP4-215ENST00000494945 VPS51Q9UID3 782 aa11.21□□□□□ -0.61
PKP4-215ENST00000494945 CLEC4EQ9ULY5 219 aa11.21□□□□□ -0.61
PKP4-215ENST00000494945 TTLL3Q9Y4R7 772 aa11.21□□□□□ -0.61
PKP4-215ENST00000494945 F5H423 210 aaPredicted RBP11.2□□□□□ -0.62
PKP4-215ENST00000494945 SNAP91O60641 907 aa11.2□□□□□ -0.62
PKP4-215ENST00000494945 ECI2O75521 394 aa11.2□□□□□ -0.62
PKP4-215ENST00000494945 TTC4O95801 387 aa11.2□□□□□ -0.62
PKP4-215ENST00000494945 PABPC1P11940 636 aaKnown RBP11.2□□□□□ -0.62
PKP4-215ENST00000494945 TSHRP16473 764 aa11.2□□□□□ -0.62
PKP4-215ENST00000494945 HLA-FP30511 346 aa11.2□□□□□ -0.62
PKP4-215ENST00000494945 MAGEA3P43357 314 aa11.2□□□□□ -0.62
PKP4-215ENST00000494945 SULT2A1Q06520 285 aa11.2□□□□□ -0.62
PKP4-215ENST00000494945 ITKQ08881 620 aa11.2□□□□□ -0.62
PKP4-215ENST00000494945 CCDC38Q502W7 563 aa11.2□□□□□ -0.62
PKP4-215ENST00000494945 PITRM1Q5JRX3 1037 aa11.2□□□□□ -0.62
PKP4-215ENST00000494945 FNBP1LQ5T0N5 605 aa11.2□□□□□ -0.62
PKP4-215ENST00000494945 GPR153Q6NV75 609 aa11.2□□□□□ -0.62
PKP4-215ENST00000494945 KIAA0907Q7Z7F0 614 aaPredicted RBP11.2□□□□□ -0.62
PKP4-215ENST00000494945 YAF2Q8IY57 180 aa11.2□□□□□ -0.62
PKP4-215ENST00000494945 ZBED8Q8IZ13 594 aa11.2□□□□□ -0.62
PKP4-215ENST00000494945 APCDD1Q8J025 514 aa11.2□□□□□ -0.62
PKP4-215ENST00000494945 MICALL1Q8N3F8 863 aa11.2□□□□□ -0.62
PKP4-215ENST00000494945 OXNAD1Q96HP4 312 aaPredicted RBP11.2□□□□□ -0.62
PKP4-215ENST00000494945 SEMA4AQ9H3S1 761 aa11.2□□□□□ -0.62
PKP4-215ENST00000494945 ABCB8Q9NUT2 735 aa11.2□□□□□ -0.62
PKP4-215ENST00000494945 DNAJC17Q9NVM6 304 aaKnown RBP11.2□□□□□ -0.62
PKP4-215ENST00000494945 EPS15L1Q9UBC2 864 aa11.2□□□□□ -0.62
PKP4-215ENST00000494945 GGA2Q9UJY4 613 aa11.2□□□□□ -0.62
PKP4-215ENST00000494945 FBXO10Q9UK96 956 aa11.2□□□□□ -0.62
PKP4-215ENST00000494945 ATG2BQ96BY7 2078 aa11.2□□□□□ -0.62
PKP4-215ENST00000494945 LRRK1Q38SD2 2015 aa11.19□□□□□ -0.62
PKP4-215ENST00000494945 RIPK2O43353 540 aa11.19□□□□□ -0.62
PKP4-215ENST00000494945 SASH3O75995 380 aa11.19□□□□□ -0.62
PKP4-215ENST00000494945 TMCC1O94876 653 aa11.19□□□□□ -0.62
PKP4-215ENST00000494945 CD160O95971 181 aa11.19□□□□□ -0.62
PKP4-215ENST00000494945 MT-CYBP00156 380 aaPredicted RBP11.19□□□□□ -0.62
PKP4-215ENST00000494945 ABHD2P08910 425 aa11.19□□□□□ -0.62
PKP4-215ENST00000494945 NUDT17P0C025 328 aa11.19□□□□□ -0.62
PKP4-215ENST00000494945 PSMC3P17980 439 aa11.19□□□□□ -0.62
PKP4-215ENST00000494945 SERPINH1P50454 418 aaKnown RBP11.19□□□□□ -0.62
PKP4-215ENST00000494945 MAXP61244 160 aa11.19□□□□□ -0.62
PKP4-215ENST00000494945 NSUN2Q08J23 767 aaKnown RBP eCLIP11.19□□□□□ -0.62
PKP4-215ENST00000494945 NIPAL4Q0D2K0 466 aa11.19□□□□□ -0.62
PKP4-215ENST00000494945 NR1H3Q13133 447 aa11.19□□□□□ -0.62
PKP4-215ENST00000494945 CYTH1Q15438 398 aa11.19□□□□□ -0.62
PKP4-215ENST00000494945 BBS9Q3SYG4 887 aa11.19□□□□□ -0.62
PKP4-215ENST00000494945 MSS51Q4VC12 460 aa11.19□□□□□ -0.62
PKP4-215ENST00000494945 RALGPS1Q5JS13 557 aa11.19□□□□□ -0.62
PKP4-215ENST00000494945 DENND2CQ68D51 928 aa11.19□□□□□ -0.62
PKP4-215ENST00000494945 TRIM68Q6AZZ1 485 aa11.19□□□□□ -0.62
PKP4-215ENST00000494945 ASTLQ6HA08 431 aaPredicted RBP11.19□□□□□ -0.62
PKP4-215ENST00000494945 KDELC1Q6UW63 502 aa11.19□□□□□ -0.62
PKP4-215ENST00000494945 LRIG3Q6UXM1 1119 aa11.19□□□□□ -0.62
PKP4-215ENST00000494945 LEKR1Q6ZMV7 388 aa11.19□□□□□ -0.62
PKP4-215ENST00000494945 PRPF39Q86UA1 669 aaKnown RBP11.19□□□□□ -0.62
PKP4-215ENST00000494945 IQCKQ8N0W5 287 aa11.19□□□□□ -0.62
PKP4-215ENST00000494945 AHI1Q8N157 1196 aa11.19□□□□□ -0.62
PKP4-215ENST00000494945 CPA6Q8N4T0 437 aa11.19□□□□□ -0.62
PKP4-215ENST00000494945 SPATA22Q8NHS9 363 aa11.19□□□□□ -0.62
PKP4-215ENST00000494945 ARRDC2Q8TBH0 407 aa11.19□□□□□ -0.62
PKP4-215ENST00000494945 WFIKKN2Q8TEU8 576 aa11.19□□□□□ -0.62
PKP4-215ENST00000494945 PYROXD1Q8WU10 500 aa11.19□□□□□ -0.62
PKP4-215ENST00000494945 TADA1Q96BN2 335 aa11.19□□□□□ -0.62
PKP4-215ENST00000494945 ASIC4Q96FT7 647 aa11.19□□□□□ -0.62
PKP4-215ENST00000494945 LRCH3Q96II8 777 aa11.19□□□□□ -0.62
PKP4-215ENST00000494945 PKNOX2Q96KN3 472 aa11.19□□□□□ -0.62
PKP4-215ENST00000494945 C9orf72Q96LT7 481 aa11.19□□□□□ -0.62
PKP4-215ENST00000494945 FAM161BQ96MY7 647 aa11.19□□□□□ -0.62
PKP4-215ENST00000494945 NUDCD1Q96RS6 583 aa11.19□□□□□ -0.62
PKP4-215ENST00000494945 SEMA3CQ99985 751 aa11.19□□□□□ -0.62
PKP4-215ENST00000494945 TBL1YQ9BQ87 522 aa11.19□□□□□ -0.62
PKP4-215ENST00000494945 NAT9Q9BTE0 207 aa11.19□□□□□ -0.62
PKP4-215ENST00000494945 EPB41L4BQ9H329 900 aa11.19□□□□□ -0.62
PKP4-215ENST00000494945 EBF3Q9H4W6 596 aa11.19□□□□□ -0.62
PKP4-215ENST00000494945 ECT2Q9H8V3 914 aa11.19□□□□□ -0.62
PKP4-215ENST00000494945 CASS4Q9NQ75 786 aa11.19□□□□□ -0.62
PKP4-215ENST00000494945 NINJ2Q9NZG7 142 aa11.19□□□□□ -0.62
PKP4-215ENST00000494945 SLC25A13Q9UJS0 675 aa11.19□□□□□ -0.62
PKP4-215ENST00000494945 INTS6Q9UL03 887 aaKnown RBP11.19□□□□□ -0.62
PKP4-215ENST00000494945 SLC27A6Q9Y2P4 619 aa11.19□□□□□ -0.62
PKP4-215ENST00000494945 USP15Q9Y4E8 981 aaPredicted RBP11.19□□□□□ -0.62
PKP4-215ENST00000494945 TEX264Q9Y6I9 313 aa11.19□□□□□ -0.62
PKP4-215ENST00000494945 SDR42E2A6NKP2 422 aa11.18□□□□□ -0.62
PKP4-215ENST00000494945 SPAG6O75602 509 aa11.18□□□□□ -0.62
PKP4-215ENST00000494945 MMP2P08253 660 aa11.18□□□□□ -0.62
PKP4-215ENST00000494945 SERPINF2P08697 491 aa11.18□□□□□ -0.62
PKP4-215ENST00000494945 GSTA2P09210 222 aa11.18□□□□□ -0.62
PKP4-215ENST00000494945 ARSAP15289 507 aa11.18□□□□□ -0.62
PKP4-215ENST00000494945 CR2P20023 1033 aa11.18□□□□□ -0.62
PKP4-215ENST00000494945 ADRA1AP35348 466 aa11.18□□□□□ -0.62
PKP4-215ENST00000494945 ELK3P41970 407 aa11.18□□□□□ -0.62
PKP4-215ENST00000494945 CD86P42081 329 aa11.18□□□□□ -0.62
PKP4-215ENST00000494945 NPY2RP49146 381 aa11.18□□□□□ -0.62
PKP4-215ENST00000494945 DGKGP49619 791 aa11.18□□□□□ -0.62
PKP4-215ENST00000494945 EIF3BP55884 814 aaKnown RBP11.18□□□□□ -0.62
PKP4-215ENST00000494945 WNT3AP56704 352 aa11.18□□□□□ -0.62
PKP4-215ENST00000494945 SKOR1P84550 965 aa11.18□□□□□ -0.62
PKP4-215ENST00000494945 DSC2Q02487 901 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms