RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 AADACL2Q6P093 401 aa4.76□□□□□ -1.65
SMC4-224ENST00000494612 H1FNTQ75WM6 255 aaPredicted RBP4.76□□□□□ -1.65
SMC4-224ENST00000494612 CNTROBQ8N137 903 aa4.76□□□□□ -1.65
SMC4-224ENST00000494612 PLD5Q8N7P1 536 aa4.76□□□□□ -1.65
SMC4-224ENST00000494612 SMRP1Q8NCR6 262 aa4.76□□□□□ -1.65
SMC4-224ENST00000494612 C16orf52Q8NHV5 167 aa4.76□□□□□ -1.65
SMC4-224ENST00000494612 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.76□□□□□ -1.65
SMC4-224ENST00000494612 IGFBPL1Q8WX77 278 aa4.76□□□□□ -1.65
SMC4-224ENST00000494612 SIGLEC11Q96RL6 698 aa4.76□□□□□ -1.65
SMC4-224ENST00000494612 SEMA4BQ9NPR2 832 aaPredicted RBP4.76□□□□□ -1.65
SMC4-224ENST00000494612 TRNAU1APQ9NX07 287 aaKnown RBP4.76□□□□□ -1.65
SMC4-224ENST00000494612 LY6G6EA0A0G2JKS1 128 aa4.75□□□□□ -1.65
SMC4-224ENST00000494612 MYMKA6NI61 221 aa4.75□□□□□ -1.65
SMC4-224ENST00000494612 SNAP23O00161 211 aa4.75□□□□□ -1.65
SMC4-224ENST00000494612 RTN3O95197 1032 aaPredicted RBP4.75□□□□□ -1.65
SMC4-224ENST00000494612 DDAH2O95865 285 aa4.75□□□□□ -1.65
SMC4-224ENST00000494612 ADAP00813 363 aa4.75□□□□□ -1.65
SMC4-224ENST00000494612 CTSAP10619 480 aa4.75□□□□□ -1.65
SMC4-224ENST00000494612 DDIT3P35638 169 aa4.75□□□□□ -1.65
SMC4-224ENST00000494612 UFM1P61960 85 aa4.75□□□□□ -1.65
SMC4-224ENST00000494612 RPS13P62277 151 aaKnown RBP4.75□□□□□ -1.65
SMC4-224ENST00000494612 KRT32Q14532 448 aa4.75□□□□□ -1.65
SMC4-224ENST00000494612 PLK5Q496M5 336 aa4.75□□□□□ -1.65
SMC4-224ENST00000494612 SLC9B1Q4ZJI4 515 aa4.75□□□□□ -1.65
SMC4-224ENST00000494612 ZNF766Q5HY98 468 aa4.75□□□□□ -1.65
SMC4-224ENST00000494612 HAUS3Q68CZ6 603 aa4.75□□□□□ -1.65
SMC4-224ENST00000494612 MRPL10Q7Z7H8 261 aaKnown RBP4.75□□□□□ -1.65
SMC4-224ENST00000494612 TSPYL6Q8N831 410 aa4.75□□□□□ -1.65
SMC4-224ENST00000494612 WIPF2Q8TF74 440 aaPredicted RBP4.75□□□□□ -1.65
SMC4-224ENST00000494612 FAR1Q8WVX9 515 aa4.75□□□□□ -1.65
SMC4-224ENST00000494612 RAB40AQ8WXH6 277 aa4.75□□□□□ -1.65
SMC4-224ENST00000494612 ATOH1Q92858 354 aaPredicted RBP4.75□□□□□ -1.65
SMC4-224ENST00000494612 SH3KBP1Q96B97 665 aa4.75□□□□□ -1.65
SMC4-224ENST00000494612 COG5Q9UP83 839 aa4.75□□□□□ -1.65
SMC4-224ENST00000494612 TMEM98Q9Y2Y6 226 aa4.75□□□□□ -1.65
SMC4-224ENST00000494612 TEX13CA0A0J9YWL9 993 aa4.74□□□□□ -1.65
SMC4-224ENST00000494612 A0A1W2PPH5 198 aa4.74□□□□□ -1.65
SMC4-224ENST00000494612 PABPN1LA6NDY0 278 aaKnown RBP4.74□□□□□ -1.65
SMC4-224ENST00000494612 FOXO6A8MYZ6 492 aa4.74□□□□□ -1.65
SMC4-224ENST00000494612 B4E171 279 aa4.74□□□□□ -1.65
SMC4-224ENST00000494612 TEX22C9J3V5 150 aa4.74□□□□□ -1.65
SMC4-224ENST00000494612 F8W810 466 aa4.74□□□□□ -1.65
SMC4-224ENST00000494612 IFNL4K9M1U5 179 aa4.74□□□□□ -1.65
SMC4-224ENST00000494612 CHRM4P08173 479 aa4.74□□□□□ -1.65
SMC4-224ENST00000494612 CHRNB1P11230 501 aa4.74□□□□□ -1.65
SMC4-224ENST00000494612 TSPAN7P41732 249 aa4.74□□□□□ -1.65
SMC4-224ENST00000494612 GPD2P43304 727 aa4.74□□□□□ -1.65
SMC4-224ENST00000494612 CCR9P51686 369 aa4.74□□□□□ -1.65
SMC4-224ENST00000494612 EFNB1P98172 346 aa4.74□□□□□ -1.65
SMC4-224ENST00000494612 ID2Q02363 134 aa4.74□□□□□ -1.65
SMC4-224ENST00000494612 ME3Q16798 604 aa4.74□□□□□ -1.65
SMC4-224ENST00000494612 SMTNL2Q2TAL5 461 aa4.74□□□□□ -1.65
SMC4-224ENST00000494612 EDRF1Q3B7T1 1238 aa4.74□□□□□ -1.65
SMC4-224ENST00000494612 SYTL3Q4VX76 610 aa4.74□□□□□ -1.65
SMC4-224ENST00000494612 ALG10Q5BKT4 473 aa4.74□□□□□ -1.65
SMC4-224ENST00000494612 ALG10BQ5I7T1 473 aa4.74□□□□□ -1.65
SMC4-224ENST00000494612 AAGABQ6PD74 315 aa4.74□□□□□ -1.65
SMC4-224ENST00000494612 ATF7IPQ6VMQ6 1270 aa4.74□□□□□ -1.65
SMC4-224ENST00000494612 TBC1D1Q86TI0 1168 aaPredicted RBP4.74□□□□□ -1.65
SMC4-224ENST00000494612 TRIM74Q86UV6 250 aa4.74□□□□□ -1.65
SMC4-224ENST00000494612 TRIM73Q86UV7 250 aa4.74□□□□□ -1.65
SMC4-224ENST00000494612 WDR5BQ86VZ2 330 aa4.74□□□□□ -1.65
SMC4-224ENST00000494612 ARMC8Q8IUR7 673 aa4.74□□□□□ -1.65
SMC4-224ENST00000494612 DDIASQ8IXT1 998 aa4.74□□□□□ -1.65
SMC4-224ENST00000494612 CPXM2Q8N436 756 aa4.74□□□□□ -1.65
SMC4-224ENST00000494612 LRRC57Q8N9N7 239 aa4.74□□□□□ -1.65
SMC4-224ENST00000494612 TNIP2Q8NFZ5 429 aa4.74□□□□□ -1.65
SMC4-224ENST00000494612 RASSF8Q8NHQ8 419 aa4.74□□□□□ -1.65
SMC4-224ENST00000494612 GDPD5Q8WTR4 605 aa4.74□□□□□ -1.65
SMC4-224ENST00000494612 HDAC2Q92769 488 aaKnown RBP4.74□□□□□ -1.65
SMC4-224ENST00000494612 CUL5Q93034 780 aa4.74□□□□□ -1.65
SMC4-224ENST00000494612 UNC45AQ9H3U1 944 aa4.74□□□□□ -1.65
SMC4-224ENST00000494612 ACTR5Q9H9F9 607 aaPredicted RBP4.74□□□□□ -1.65
SMC4-224ENST00000494612 BABAM1Q9NWV8 329 aa4.74□□□□□ -1.65
SMC4-224ENST00000494612 ZDHHC7Q9NXF8 308 aa4.74□□□□□ -1.65
SMC4-224ENST00000494612 RAP2CQ9Y3L5 183 aa4.74□□□□□ -1.65
SMC4-224ENST00000494612 MYO15BQ96JP2 1530 aa4.73□□□□□ -1.65
SMC4-224ENST00000494612 TRBV5-3A0A0A0MS03 114 aa4.73□□□□□ -1.65
SMC4-224ENST00000494612 A6NNC1 897 aa4.73□□□□□ -1.65
SMC4-224ENST00000494612 TACC1O75410 805 aa4.73□□□□□ -1.65
SMC4-224ENST00000494612 TMCC1O94876 653 aa4.73□□□□□ -1.65
SMC4-224ENST00000494612 F9P00740 461 aa4.73□□□□□ -1.65
SMC4-224ENST00000494612 EDN2P20800 178 aa4.73□□□□□ -1.65
SMC4-224ENST00000494612 C6orf10Q5SRN2 563 aa4.73□□□□□ -1.65
SMC4-224ENST00000494612 WDR78Q5VTH9 848 aa4.73□□□□□ -1.65
SMC4-224ENST00000494612 IL20RBQ6UXL0 311 aa4.73□□□□□ -1.65
SMC4-224ENST00000494612 CPLX4Q7Z7G2 160 aa4.73□□□□□ -1.65
SMC4-224ENST00000494612 IGFN1Q86VF2 1251 aa4.73□□□□□ -1.65
SMC4-224ENST00000494612 LURAP1LQ8IV03 231 aa4.73□□□□□ -1.65
SMC4-224ENST00000494612 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.73□□□□□ -1.65
SMC4-224ENST00000494612 DPP10Q8N608 796 aa4.73□□□□□ -1.65
SMC4-224ENST00000494612 TDRD7Q8NHU6 1098 aaKnown RBP4.73□□□□□ -1.65
SMC4-224ENST00000494612 ZCCHC10Q8TBK6 192 aa4.73□□□□□ -1.65
SMC4-224ENST00000494612 BCAS4Q8TDM0 211 aa4.73□□□□□ -1.65
SMC4-224ENST00000494612 RFFLQ8WZ73 363 aa4.73□□□□□ -1.65
SMC4-224ENST00000494612 KLHL15Q96M94 604 aa4.73□□□□□ -1.65
SMC4-224ENST00000494612 TUBB6Q9BUF5 446 aa4.73□□□□□ -1.65
SMC4-224ENST00000494612 NUF2Q9BZD4 464 aa4.73□□□□□ -1.65
SMC4-224ENST00000494612 PAPOLBQ9NRJ5 636 aaKnown RBP4.73□□□□□ -1.65
SMC4-224ENST00000494612 THSD1Q9NS62 852 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms