RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 SIGLEC6O43699 453 aa12.05□□□□□ -0.48
CSNK1E-212ENST00000494610 DFNA5O60443 496 aa12.05□□□□□ -0.48
CSNK1E-212ENST00000494610 FBXO21O94952 628 aa12.05□□□□□ -0.48
CSNK1E-212ENST00000494610 IL1BP01584 269 aa12.05□□□□□ -0.48
CSNK1E-212ENST00000494610 MPOP05164 745 aa12.05□□□□□ -0.48
CSNK1E-212ENST00000494610 CYP1A2P05177 515 aa12.05□□□□□ -0.48
CSNK1E-212ENST00000494610 GPD2P43304 727 aa12.05□□□□□ -0.48
CSNK1E-212ENST00000494610 HADHBP55084 474 aaKnown RBP12.05□□□□□ -0.48
CSNK1E-212ENST00000494610 PITX1P78337 314 aaPredicted RBP12.05□□□□□ -0.48
CSNK1E-212ENST00000494610 CFHR1Q03591 330 aa12.05□□□□□ -0.48
CSNK1E-212ENST00000494610 LY6DQ14210 128 aa12.05□□□□□ -0.48
CSNK1E-212ENST00000494610 E2F5Q15329 346 aa12.05□□□□□ -0.48
CSNK1E-212ENST00000494610 PROX2Q3B8N5 592 aa12.05□□□□□ -0.48
CSNK1E-212ENST00000494610 RAP1GAP2Q684P5 730 aa12.05□□□□□ -0.48
CSNK1E-212ENST00000494610 MSANTD2Q6P1R3 559 aa12.05□□□□□ -0.48
CSNK1E-212ENST00000494610 DENND1BQ6P3S1 775 aa12.05□□□□□ -0.48
CSNK1E-212ENST00000494610 DNAJC24Q6P3W2 148 aa12.05□□□□□ -0.48
CSNK1E-212ENST00000494610 GPR155Q7Z3F1 870 aa12.05□□□□□ -0.48
CSNK1E-212ENST00000494610 SLC25A45Q8N413 288 aa12.05□□□□□ -0.48
CSNK1E-212ENST00000494610 C3orf20Q8ND61 904 aa12.05□□□□□ -0.48
CSNK1E-212ENST00000494610 SNIP1Q8TAD8 396 aaKnown RBP12.05□□□□□ -0.48
CSNK1E-212ENST00000494610 CPA5Q8WXQ8 436 aa12.05□□□□□ -0.48
CSNK1E-212ENST00000494610 KCTD13Q8WZ19 329 aa12.05□□□□□ -0.48
CSNK1E-212ENST00000494610 FGF11Q92914 225 aa12.05□□□□□ -0.48
CSNK1E-212ENST00000494610 C18orf8Q96DM3 657 aa12.05□□□□□ -0.48
CSNK1E-212ENST00000494610 C11orf70Q9BRQ4 267 aa12.05□□□□□ -0.48
CSNK1E-212ENST00000494610 NRSN2Q9GZP1 204 aa12.05□□□□□ -0.48
CSNK1E-212ENST00000494610 ST7Q9NRC1 585 aa12.05□□□□□ -0.48
CSNK1E-212ENST00000494610 PARVAQ9NVD7 372 aa12.05□□□□□ -0.48
CSNK1E-212ENST00000494610 TAS2R14Q9NYV8 317 aa12.05□□□□□ -0.48
CSNK1E-212ENST00000494610 CTTNBP2NLQ9P2B4 639 aa12.05□□□□□ -0.48
CSNK1E-212ENST00000494610 CNOT8Q9UFF9 292 aaKnown RBP12.05□□□□□ -0.48
CSNK1E-212ENST00000494610 GUCA1BQ9UMX6 200 aa12.05□□□□□ -0.48
CSNK1E-212ENST00000494610 CLCA2Q9UQC9 943 aa12.05□□□□□ -0.48
CSNK1E-212ENST00000494610 TK2O00142 265 aa12.04□□□□□ -0.48
CSNK1E-212ENST00000494610 FFAR2O15552 330 aa12.04□□□□□ -0.48
CSNK1E-212ENST00000494610 RNASEH1O60930 286 aaKnown RBP12.04□□□□□ -0.48
CSNK1E-212ENST00000494610 MTA2O94776 668 aa12.04□□□□□ -0.48
CSNK1E-212ENST00000494610 LATS1O95835 1130 aa12.04□□□□□ -0.48
CSNK1E-212ENST00000494610 GOT1P17174 413 aa12.04□□□□□ -0.48
CSNK1E-212ENST00000494610 CKMT2P17540 419 aa12.04□□□□□ -0.48
CSNK1E-212ENST00000494610 MZF1P28698 734 aaPredicted RBP12.04□□□□□ -0.48
CSNK1E-212ENST00000494610 NOP2P46087 812 aaKnown RBP12.04□□□□□ -0.48
CSNK1E-212ENST00000494610 GABRB2P47870 512 aa12.04□□□□□ -0.48
CSNK1E-212ENST00000494610 SLC11A2P49281 568 aa12.04□□□□□ -0.48
CSNK1E-212ENST00000494610 CCR5P51681 352 aa12.04□□□□□ -0.48
CSNK1E-212ENST00000494610 TBC1D25Q3MII6 688 aa12.04□□□□□ -0.48
CSNK1E-212ENST00000494610 MS4A13Q5J8X5 152 aa12.04□□□□□ -0.48
CSNK1E-212ENST00000494610 MPP7Q5T2T1 576 aa12.04□□□□□ -0.48
CSNK1E-212ENST00000494610 ARHGAP40Q5TG30 622 aa12.04□□□□□ -0.48
CSNK1E-212ENST00000494610 SYPL2Q5VXT5 272 aa12.04□□□□□ -0.48
CSNK1E-212ENST00000494610 SND1Q7KZF4 910 aaKnown RBP eCLIP12.04□□□□□ -0.48
CSNK1E-212ENST00000494610 LGI2Q8N0V4 545 aa12.04□□□□□ -0.48
CSNK1E-212ENST00000494610 HJURPQ8NCD3 748 aaPredicted RBP12.04□□□□□ -0.48
CSNK1E-212ENST00000494610 ZNF564Q8TBZ8 553 aaPredicted RBP12.04□□□□□ -0.48
CSNK1E-212ENST00000494610 DQX1Q8TE96 717 aaKnown RBP12.04□□□□□ -0.48
CSNK1E-212ENST00000494610 SLC35F5Q8WV83 523 aa12.04□□□□□ -0.48
CSNK1E-212ENST00000494610 SELENOOQ9BVL4 669 aa12.04□□□□□ -0.48
CSNK1E-212ENST00000494610 THAP2Q9H0W7 228 aa12.04□□□□□ -0.48
CSNK1E-212ENST00000494610 OSBPL2Q9H1P3 480 aa12.04□□□□□ -0.48
CSNK1E-212ENST00000494610 CNGB3Q9NQW8 809 aa12.04□□□□□ -0.48
CSNK1E-212ENST00000494610 EDDM13A0A1B0GTR0 161 aa12.03□□□□□ -0.48
CSNK1E-212ENST00000494610 MACROD2A1Z1Q3 448 aa12.03□□□□□ -0.48
CSNK1E-212ENST00000494610 PMS2P1A4D2B8 440 aa12.03□□□□□ -0.48
CSNK1E-212ENST00000494610 LATO43561 262 aa12.03□□□□□ -0.48
CSNK1E-212ENST00000494610 LUC7L3O95232 432 aaKnown RBP12.03□□□□□ -0.48
CSNK1E-212ENST00000494610 MT-CO3P00414 261 aa12.03□□□□□ -0.48
CSNK1E-212ENST00000494610 LTFP02788 710 aa12.03□□□□□ -0.48
CSNK1E-212ENST00000494610 C1SP09871 688 aa12.03□□□□□ -0.48
CSNK1E-212ENST00000494610 PDGFRAP16234 1089 aa12.03□□□□□ -0.48
CSNK1E-212ENST00000494610 PRLRP16471 622 aa12.03□□□□□ -0.48
CSNK1E-212ENST00000494610 ARHGAP25P42331 645 aa12.03□□□□□ -0.48
CSNK1E-212ENST00000494610 RXRGP48443 463 aa12.03□□□□□ -0.48
CSNK1E-212ENST00000494610 RPL34P49207 117 aaKnown RBP12.03□□□□□ -0.48
CSNK1E-212ENST00000494610 ARRB1P49407 418 aaPredicted RBP12.03□□□□□ -0.48
CSNK1E-212ENST00000494610 IRAK1P51617 712 aa12.03□□□□□ -0.48
CSNK1E-212ENST00000494610 ECT2LQ008S8 904 aa12.03□□□□□ -0.48
CSNK1E-212ENST00000494610 CDH18Q13634 790 aa12.03□□□□□ -0.48
CSNK1E-212ENST00000494610 PTPN20Q4JDL3 420 aa12.03□□□□□ -0.48
CSNK1E-212ENST00000494610 ZNF542PQ5EBM4 170 aa12.03□□□□□ -0.48
CSNK1E-212ENST00000494610 PLEKHA7Q6IQ23 1121 aa12.03□□□□□ -0.48
CSNK1E-212ENST00000494610 C11orf63Q6NUN7 778 aa12.03□□□□□ -0.48
CSNK1E-212ENST00000494610 TMEM110Q86TL2 294 aa12.03□□□□□ -0.48
CSNK1E-212ENST00000494610 TAC4Q86UU9 113 aa12.03□□□□□ -0.48
CSNK1E-212ENST00000494610 SCML4Q8N228 414 aa12.03□□□□□ -0.48
CSNK1E-212ENST00000494610 DCBLD1Q8N8Z6 715 aa12.03□□□□□ -0.48
CSNK1E-212ENST00000494610 OR52K2Q8NGK3 314 aa12.03□□□□□ -0.48
CSNK1E-212ENST00000494610 CPXM1Q96SM3 734 aa12.03□□□□□ -0.48
CSNK1E-212ENST00000494610 LGMNQ99538 433 aa12.03□□□□□ -0.48
CSNK1E-212ENST00000494610 NCAPGQ9BPX3 1015 aa12.03□□□□□ -0.48
CSNK1E-212ENST00000494610 NUP85Q9BW27 656 aa12.03□□□□□ -0.48
CSNK1E-212ENST00000494610 SLC4A5Q9BY07 1137 aa12.03□□□□□ -0.48
CSNK1E-212ENST00000494610 PACSIN1Q9BY11 444 aa12.03□□□□□ -0.48
CSNK1E-212ENST00000494610 LACRTQ9GZZ8 138 aa12.03□□□□□ -0.48
CSNK1E-212ENST00000494610 FZD3Q9NPG1 666 aa12.03□□□□□ -0.48
CSNK1E-212ENST00000494610 TMEM51Q9NW97 253 aa12.03□□□□□ -0.48
CSNK1E-212ENST00000494610 CYTH4Q9UIA0 394 aa12.03□□□□□ -0.48
CSNK1E-212ENST00000494610 FZD4Q9ULV1 537 aa12.03□□□□□ -0.48
CSNK1E-212ENST00000494610 SCML1Q9UN30 329 aa12.03□□□□□ -0.48
CSNK1E-212ENST00000494610 COL6A6A6NMZ7 2263 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms