RNA–Protein interactions for RNA: ENST00000494486.1

TRIM59-206, Transcript of tripartite motif containing 59, humanhuman

TSL 3

Gene TRIM59, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-206ENST00000494486 LUC7L3O95232 432 aaKnown RBP11.19□□□□□ -0.62
TRIM59-206ENST00000494486 IDEP14735 1019 aa11.19□□□□□ -0.62
TRIM59-206ENST00000494486 GAP43P17677 238 aa11.19□□□□□ -0.62
TRIM59-206ENST00000494486 PGDP52209 483 aa11.19□□□□□ -0.62
TRIM59-206ENST00000494486 RAB15P59190 212 aa11.19□□□□□ -0.62
TRIM59-206ENST00000494486 RPS24P62847 133 aaKnown RBP11.19□□□□□ -0.62
TRIM59-206ENST00000494486 SGCGQ13326 291 aa11.19□□□□□ -0.62
TRIM59-206ENST00000494486 TRA2AQ13595 282 aaKnown RBP eCLIP11.19□□□□□ -0.62
TRIM59-206ENST00000494486 ARHGEF7Q14155 803 aa11.19□□□□□ -0.62
TRIM59-206ENST00000494486 PSMD6Q15008 389 aa11.19□□□□□ -0.62
TRIM59-206ENST00000494486 ZRSR2Q15696 482 aaKnown RBP11.19□□□□□ -0.62
TRIM59-206ENST00000494486 SMTNL2Q2TAL5 461 aa11.19□□□□□ -0.62
TRIM59-206ENST00000494486 CERCAMQ5T4B2 595 aa11.19□□□□□ -0.62
TRIM59-206ENST00000494486 SCARA5Q6ZMJ2 495 aa11.19□□□□□ -0.62
TRIM59-206ENST00000494486 APLFQ8IW19 511 aaPredicted RBP11.19□□□□□ -0.62
TRIM59-206ENST00000494486 TMIEQ8NEW7 156 aa11.19□□□□□ -0.62
TRIM59-206ENST00000494486 KCTD13Q8WZ19 329 aa11.19□□□□□ -0.62
TRIM59-206ENST00000494486 AK8Q96MA6 479 aa11.19□□□□□ -0.62
TRIM59-206ENST00000494486 PRICKLE1Q96MT3 831 aaPredicted RBP11.19□□□□□ -0.62
TRIM59-206ENST00000494486 KLF6Q99612 283 aaPredicted RBP11.19□□□□□ -0.62
TRIM59-206ENST00000494486 UBXN6Q9BZV1 441 aa11.19□□□□□ -0.62
TRIM59-206ENST00000494486 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.19□□□□□ -0.62
TRIM59-206ENST00000494486 RRN3Q9NYV6 651 aa11.19□□□□□ -0.62
TRIM59-206ENST00000494486 PNMA8BQ9ULN7 279 aaPredicted RBP11.19□□□□□ -0.62
TRIM59-206ENST00000494486 FARP1Q9Y4F1 1045 aaPredicted RBP11.19□□□□□ -0.62
TRIM59-206ENST00000494486 OAS3Q9Y6K5 1087 aaKnown RBP11.19□□□□□ -0.62
TRIM59-206ENST00000494486 ANKUB1A6NFN9 424 aa11.18□□□□□ -0.62
TRIM59-206ENST00000494486 B4E171 279 aa11.18□□□□□ -0.62
TRIM59-206ENST00000494486 KPNA3O00505 521 aaPredicted RBP11.18□□□□□ -0.62
TRIM59-206ENST00000494486 INPP4BO15327 924 aa11.18□□□□□ -0.62
TRIM59-206ENST00000494486 EPB41L2O43491 1005 aaKnown RBP11.18□□□□□ -0.62
TRIM59-206ENST00000494486 LRCH4O75427 683 aa11.18□□□□□ -0.62
TRIM59-206ENST00000494486 CLSTN1O94985 981 aa11.18□□□□□ -0.62
TRIM59-206ENST00000494486 CELA2BP08218 269 aaPredicted RBP11.18□□□□□ -0.62
TRIM59-206ENST00000494486 CTSEP14091 401 aa11.18□□□□□ -0.62
TRIM59-206ENST00000494486 CD1EP15812 388 aa11.18□□□□□ -0.62
TRIM59-206ENST00000494486 UBA7P41226 1012 aa11.18□□□□□ -0.62
TRIM59-206ENST00000494486 TSPAN7P41732 249 aa11.18□□□□□ -0.62
TRIM59-206ENST00000494486 YPEL5P62699 121 aa11.18□□□□□ -0.62
TRIM59-206ENST00000494486 ELOAQ14241 798 aaKnown RBP11.18□□□□□ -0.62
TRIM59-206ENST00000494486 PM20D1Q6GTS8 502 aa11.18□□□□□ -0.62
TRIM59-206ENST00000494486 ERN2Q76MJ5 926 aaKnown RBP11.18□□□□□ -0.62
TRIM59-206ENST00000494486 RD3Q7Z3Z2 195 aa11.18□□□□□ -0.62
TRIM59-206ENST00000494486 RCBTB1Q8NDN9 531 aa11.18□□□□□ -0.62
TRIM59-206ENST00000494486 DENND6BQ8NEG7 585 aa11.18□□□□□ -0.62
TRIM59-206ENST00000494486 ASB12Q8WXK4 309 aa11.18□□□□□ -0.62
TRIM59-206ENST00000494486 ZNF516Q92618 1163 aa11.18□□□□□ -0.62
TRIM59-206ENST00000494486 RNF34Q969K3 372 aa11.18□□□□□ -0.62
TRIM59-206ENST00000494486 CCDC127Q96BQ5 260 aa11.18□□□□□ -0.62
TRIM59-206ENST00000494486 HDAC8Q9BY41 377 aa11.18□□□□□ -0.62
TRIM59-206ENST00000494486 EDEM3Q9BZQ6 932 aa11.18□□□□□ -0.62
TRIM59-206ENST00000494486 MRPL40Q9NQ50 206 aaKnown RBP11.18□□□□□ -0.62
TRIM59-206ENST00000494486 TBC1D7Q9P0N9 293 aa11.18□□□□□ -0.62
TRIM59-206ENST00000494486 LRIT1Q9P2V4 623 aa11.18□□□□□ -0.62
TRIM59-206ENST00000494486 HMGXB4Q9UGU5 601 aa11.18□□□□□ -0.62
TRIM59-206ENST00000494486 KCND3Q9UK17 655 aa11.18□□□□□ -0.62
TRIM59-206ENST00000494486 ANKHD1Q8IWZ3 2542 aaKnown RBP11.17□□□□□ -0.62
TRIM59-206ENST00000494486 IGHV5-10-1A0A0J9YXX1 117 aa11.17□□□□□ -0.62
TRIM59-206ENST00000494486 TOR1BO14657 336 aa11.17□□□□□ -0.62
TRIM59-206ENST00000494486 ZBED1O96006 694 aa11.17□□□□□ -0.62
TRIM59-206ENST00000494486 IGLV3-27P01718 113 aa11.17□□□□□ -0.62
TRIM59-206ENST00000494486 CAPN3P20807 821 aa11.17□□□□□ -0.62
TRIM59-206ENST00000494486 CSTF2P33240 577 aaKnown RBP eCLIP11.17□□□□□ -0.62
TRIM59-206ENST00000494486 MAN1A1P33908 653 aa11.17□□□□□ -0.62
TRIM59-206ENST00000494486 CASP5P51878 434 aa11.17□□□□□ -0.62
TRIM59-206ENST00000494486 PLK1P53350 603 aa11.17□□□□□ -0.62
TRIM59-206ENST00000494486 B4GALNT1Q00973 533 aa11.17□□□□□ -0.62
TRIM59-206ENST00000494486 DLG2Q15700 870 aa11.17□□□□□ -0.62
TRIM59-206ENST00000494486 ME3Q16798 604 aa11.17□□□□□ -0.62
TRIM59-206ENST00000494486 EDRF1Q3B7T1 1238 aa11.17□□□□□ -0.62
TRIM59-206ENST00000494486 RAB41Q5JT25 222 aa11.17□□□□□ -0.62
TRIM59-206ENST00000494486 JMJD6Q6NYC1 403 aaPredicted RBP11.17□□□□□ -0.62
TRIM59-206ENST00000494486 OGFOD3Q6PK18 319 aa11.17□□□□□ -0.62
TRIM59-206ENST00000494486 MACC1Q6ZN28 852 aa11.17□□□□□ -0.62
TRIM59-206ENST00000494486 NRSN1Q8IZ57 195 aa11.17□□□□□ -0.62
TRIM59-206ENST00000494486 FBXO18Q8NFZ0 1043 aa11.17□□□□□ -0.62
TRIM59-206ENST00000494486 LARP4BQ92615 738 aaKnown RBP11.17□□□□□ -0.62
TRIM59-206ENST00000494486 C1QTNF2Q9BXJ5 285 aa11.17□□□□□ -0.62
TRIM59-206ENST00000494486 RDH14Q9HBH5 336 aa11.17□□□□□ -0.62
TRIM59-206ENST00000494486 OLFML3Q9NRN5 406 aa11.17□□□□□ -0.62
TRIM59-206ENST00000494486 PCDHGA9Q9Y5G4 932 aaKnown RBP11.17□□□□□ -0.62
TRIM59-206ENST00000494486 AKAP9Q99996 3911 aa11.17□□□□□ -0.62
TRIM59-206ENST00000494486 CSMD2Q7Z408 3487 aa11.17□□□□□ -0.62
TRIM59-206ENST00000494486 CCDC168Q8NDH2 2452 aa11.16□□□□□ -0.62
TRIM59-206ENST00000494486 ZW10O43264 779 aa11.16□□□□□ -0.62
TRIM59-206ENST00000494486 MSI1O43347 362 aaKnown RBP11.16□□□□□ -0.62
TRIM59-206ENST00000494486 NUDT21O43809 227 aaKnown RBP11.16□□□□□ -0.62
TRIM59-206ENST00000494486 PPP6R2O75170 966 aa11.16□□□□□ -0.62
TRIM59-206ENST00000494486 PRNPP04156 253 aa11.16□□□□□ -0.62
TRIM59-206ENST00000494486 CTSLP07711 333 aa11.16□□□□□ -0.62
TRIM59-206ENST00000494486 CHRNA3P32297 505 aa11.16□□□□□ -0.62
TRIM59-206ENST00000494486 NOP2P46087 812 aaKnown RBP11.16□□□□□ -0.62
TRIM59-206ENST00000494486 HK3P52790 923 aa11.16□□□□□ -0.62
TRIM59-206ENST00000494486 CENPCQ03188 943 aa11.16□□□□□ -0.62
TRIM59-206ENST00000494486 CYP24A1Q07973 514 aa11.16□□□□□ -0.62
TRIM59-206ENST00000494486 ERV3-1Q14264 604 aa11.16□□□□□ -0.62
TRIM59-206ENST00000494486 SNRNP35Q16560 246 aaKnown RBP11.16□□□□□ -0.62
TRIM59-206ENST00000494486 MS4A13Q5J8X5 152 aa11.16□□□□□ -0.62
TRIM59-206ENST00000494486 ARL6IP4Q66PJ3 421 aaKnown RBP11.16□□□□□ -0.62
TRIM59-206ENST00000494486 NADSYN1Q6IA69 706 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms