RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 SLC8A1P32418 973 aa12.68□□□□□ -0.38
TRA2A-209ENST00000494255 GARSP41250 739 aaKnown RBP12.68□□□□□ -0.38
TRA2A-209ENST00000494255 CCNHP51946 323 aaPredicted RBP12.68□□□□□ -0.38
TRA2A-209ENST00000494255 RAD51Q06609 339 aa12.68□□□□□ -0.38
TRA2A-209ENST00000494255 GALNT2Q10471 571 aa12.68□□□□□ -0.38
TRA2A-209ENST00000494255 PPP2R5EQ16537 467 aa12.68□□□□□ -0.38
TRA2A-209ENST00000494255 TIGD7Q6NT04 549 aaPredicted RBP12.68□□□□□ -0.38
TRA2A-209ENST00000494255 USP30Q70CQ3 517 aa12.68□□□□□ -0.38
TRA2A-209ENST00000494255 PLD5Q8N7P1 536 aa12.68□□□□□ -0.38
TRA2A-209ENST00000494255 PIP4K2CQ8TBX8 421 aa12.68□□□□□ -0.38
TRA2A-209ENST00000494255 GRIN3AQ8TCU5 1115 aa12.68□□□□□ -0.38
TRA2A-209ENST00000494255 OMDQ99983 421 aa12.68□□□□□ -0.38
TRA2A-209ENST00000494255 ZDHHC6Q9H6R6 413 aa12.68□□□□□ -0.38
TRA2A-209ENST00000494255 HECAQ9UBI9 543 aaPredicted RBP12.68□□□□□ -0.38
TRA2A-209ENST00000494255 PACSIN2Q9UNF0 486 aaPredicted RBP12.68□□□□□ -0.38
TRA2A-209ENST00000494255 SHROOM3Q8TF72 1996 aa12.68□□□□□ -0.38
TRA2A-209ENST00000494255 hCG_1818297A0A087WSY0 165 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 IGHV1OR15-9A0A0B4J2B8 117 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 MAFKO60675 156 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 CST8O60676 142 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 ZNF821O75541 412 aaPredicted RBP12.67□□□□□ -0.38
TRA2A-209ENST00000494255 NEBLO76041 1014 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 RHOBTB1O94844 696 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 MAP3K6O95382 1288 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 C7P10643 843 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 KRT10P13645 584 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 CD6P30203 668 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 PEX5P50542 639 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 RENBPP51606 427 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 GBE1Q04446 702 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 ZNF235Q14590 738 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 LBRQ14739 615 aaKnown RBP12.67□□□□□ -0.38
TRA2A-209ENST00000494255 PDK1Q15118 436 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 LLGL1Q15334 1064 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 CYTH1Q15438 398 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 TAZQ16635 292 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 ATXN7L2Q5T6C5 722 aaPredicted RBP12.67□□□□□ -0.38
TRA2A-209ENST00000494255 BZW1Q7L1Q6 419 aaKnown RBP12.67□□□□□ -0.38
TRA2A-209ENST00000494255 FAM124AQ86V42 546 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 KBTBD6Q86V97 674 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 FAM160A2Q8N612 972 aaPredicted RBP12.67□□□□□ -0.38
TRA2A-209ENST00000494255 CHST14Q8NCH0 376 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 CCNYQ8ND76 341 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 TMIEQ8NEW7 156 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 TRIM58Q8NG06 486 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 ALG3Q92685 438 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 NKD2Q969F2 451 aaPredicted RBP12.67□□□□□ -0.38
TRA2A-209ENST00000494255 PPP1R16AQ96I34 528 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 DYRK4Q9NR20 520 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 FBXL12Q9NXK8 326 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 DTLQ9NZJ0 730 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 LHX3Q9UBR4 397 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 SEPT3Q9UH03 358 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 PPM1HQ9ULR3 514 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 SMG5Q9UPR3 1016 aaKnown RBP12.67□□□□□ -0.38
TRA2A-209ENST00000494255 KPNA3O00505 521 aaPredicted RBP12.67□□□□□ -0.38
TRA2A-209ENST00000494255 KRIT1O00522 736 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 PPP1R12AO14974 1030 aaPredicted RBP12.67□□□□□ -0.38
TRA2A-209ENST00000494255 LEFTY1O75610 366 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 RNASEH2AO75792 299 aaKnown RBP12.67□□□□□ -0.38
TRA2A-209ENST00000494255 IGLV3-19P01714 112 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 LMNAP02545 664 aaKnown RBP12.67□□□□□ -0.38
TRA2A-209ENST00000494255 BCKDHBP21953 392 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 TGM2P21980 687 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 CCNCP24863 283 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 HSPA9P38646 679 aaKnown RBP12.67□□□□□ -0.38
TRA2A-209ENST00000494255 NR2C2P49116 596 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 RPL6Q02878 288 aaKnown RBP12.67□□□□□ -0.38
TRA2A-209ENST00000494255 CCDC15Q0P6D6 951 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 SLC10A2Q12908 348 aaPredicted RBP12.67□□□□□ -0.38
TRA2A-209ENST00000494255 MYLK3Q32MK0 819 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 PLK5Q496M5 336 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 ARSIQ5FYB1 569 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 CCDC181Q5TID7 509 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 MARC1Q5VT66 337 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 LPCAT2Q7L5N7 544 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 HDDC3Q8N4P3 179 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 OR6K2Q8NGY2 324 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 P3H4Q92791 437 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 HDAC11Q96DB2 347 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 HES6Q96HZ4 224 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 TSGA13Q96PP4 275 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 HEMGNQ9BXL5 484 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 CD93Q9NPY3 652 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 HAUS2Q9NVX0 235 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 WSB2Q9NYS7 404 aaPredicted RBP12.67□□□□□ -0.38
TRA2A-209ENST00000494255 MBD1Q9UIS9 605 aaPredicted RBP12.67□□□□□ -0.38
TRA2A-209ENST00000494255 EFR3BQ9Y2G0 817 aa12.67□□□□□ -0.38
TRA2A-209ENST00000494255 MUC6Q6W4X9 2439 aa12.66□□□□□ -0.38
TRA2A-209ENST00000494255 A0A1W2PP55 124 aa12.66□□□□□ -0.38
TRA2A-209ENST00000494255 PROB1E7EW31 1015 aa12.66□□□□□ -0.38
TRA2A-209ENST00000494255 DDX3YO15523 660 aaKnown RBP12.66□□□□□ -0.38
TRA2A-209ENST00000494255 CTSLP07711 333 aa12.66□□□□□ -0.38
TRA2A-209ENST00000494255 PTPN7P35236 360 aa12.66□□□□□ -0.38
TRA2A-209ENST00000494255 MMP13P45452 471 aa12.66□□□□□ -0.38
TRA2A-209ENST00000494255 SLC10A7Q0GE19 358 aa12.66□□□□□ -0.38
TRA2A-209ENST00000494255 GRM3Q14832 879 aa12.66□□□□□ -0.38
TRA2A-209ENST00000494255 LPAL2Q16609 132 aa12.66□□□□□ -0.38
TRA2A-209ENST00000494255 POM121L1PQ3SYA9 428 aa12.66□□□□□ -0.38
TRA2A-209ENST00000494255 NPNTQ6UXI9 565 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms