RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 KLHDC8BQ8IXV7 354 aa11.59□□□□□ -0.55
MCF2L-231ENST00000494043 PPIL6Q8IXY8 311 aa11.59□□□□□ -0.55
MCF2L-231ENST00000494043 NAT8LQ8N9F0 302 aa11.59□□□□□ -0.55
MCF2L-231ENST00000494043 TERB1Q8NA31 727 aa11.59□□□□□ -0.55
MCF2L-231ENST00000494043 PRCCQ92733 491 aaPredicted RBP11.59□□□□□ -0.55
MCF2L-231ENST00000494043 DNASE1L2Q92874 299 aa11.59□□□□□ -0.55
MCF2L-231ENST00000494043 EXOC4Q96A65 974 aa11.59□□□□□ -0.55
MCF2L-231ENST00000494043 PPP1R2P1Q96PQ5 205 aa11.59□□□□□ -0.55
MCF2L-231ENST00000494043 FCRL5Q96RD9 977 aa11.59□□□□□ -0.55
MCF2L-231ENST00000494043 MGME1Q9BQP7 344 aa11.59□□□□□ -0.55
MCF2L-231ENST00000494043 POLR1EQ9GZS1 481 aaKnown RBP11.59□□□□□ -0.55
MCF2L-231ENST00000494043 SLC25A51Q9H1U9 297 aa11.59□□□□□ -0.55
MCF2L-231ENST00000494043 NEUROG2Q9H2A3 272 aa11.59□□□□□ -0.55
MCF2L-231ENST00000494043 LHX3Q9UBR4 397 aa11.59□□□□□ -0.55
MCF2L-231ENST00000494043 SLC25A13Q9UJS0 675 aa11.59□□□□□ -0.55
MCF2L-231ENST00000494043 ANAPC5Q9UJX4 755 aa11.59□□□□□ -0.55
MCF2L-231ENST00000494043 NFU1Q9UMS0 254 aa11.59□□□□□ -0.55
MCF2L-231ENST00000494043 SHOC2Q9UQ13 582 aa11.59□□□□□ -0.55
MCF2L-231ENST00000494043 HS3ST2Q9Y278 367 aa11.59□□□□□ -0.55
MCF2L-231ENST00000494043 COL4A2P08572 1712 aa11.59□□□□□ -0.55
MCF2L-231ENST00000494043 PRRT4C9JH25 899 aa11.58□□□□□ -0.56
MCF2L-231ENST00000494043 E7EVH7 732 aa11.58□□□□□ -0.56
MCF2L-231ENST00000494043 K7ERQ8 282 aa11.58□□□□□ -0.56
MCF2L-231ENST00000494043 SMAPO00193 183 aa11.58□□□□□ -0.56
MCF2L-231ENST00000494043 TMEM63AO94886 807 aa11.58□□□□□ -0.56
MCF2L-231ENST00000494043 APRTP07741 180 aa11.58□□□□□ -0.56
MCF2L-231ENST00000494043 MYBL2P10244 700 aa11.58□□□□□ -0.56
MCF2L-231ENST00000494043 TPSB2P20231 275 aa11.58□□□□□ -0.56
MCF2L-231ENST00000494043 SOX9P48436 509 aa11.58□□□□□ -0.56
MCF2L-231ENST00000494043 STK19P49842 368 aaPredicted RBP11.58□□□□□ -0.56
MCF2L-231ENST00000494043 MAXP61244 160 aa11.58□□□□□ -0.56
MCF2L-231ENST00000494043 RHOAP61586 193 aa11.58□□□□□ -0.56
MCF2L-231ENST00000494043 NIPAL4Q0D2K0 466 aa11.58□□□□□ -0.56
MCF2L-231ENST00000494043 PRPSAP1Q14558 356 aa11.58□□□□□ -0.56
MCF2L-231ENST00000494043 EIF4HQ15056 248 aaKnown RBP11.58□□□□□ -0.56
MCF2L-231ENST00000494043 TPSAB1Q15661 275 aa11.58□□□□□ -0.56
MCF2L-231ENST00000494043 PREPLQ4J6C6 727 aaPredicted RBP11.58□□□□□ -0.56
MCF2L-231ENST00000494043 ANKRD22Q5VYY1 191 aa11.58□□□□□ -0.56
MCF2L-231ENST00000494043 CCNI2Q6ZMN8 369 aaPredicted RBP11.58□□□□□ -0.56
MCF2L-231ENST00000494043 GSPT2Q8IYD1 628 aaKnown RBP11.58□□□□□ -0.56
MCF2L-231ENST00000494043 SH2D3CQ8N5H7 860 aa11.58□□□□□ -0.56
MCF2L-231ENST00000494043 ATP11CQ8NB49 1132 aa11.58□□□□□ -0.56
MCF2L-231ENST00000494043 TSEN2Q8NCE0 465 aaKnown RBP11.58□□□□□ -0.56
MCF2L-231ENST00000494043 FBXO25Q8TCJ0 367 aa11.58□□□□□ -0.56
MCF2L-231ENST00000494043 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.58□□□□□ -0.56
MCF2L-231ENST00000494043 IMP4Q96G21 291 aaKnown RBP11.58□□□□□ -0.56
MCF2L-231ENST00000494043 OXNAD1Q96HP4 312 aaPredicted RBP11.58□□□□□ -0.56
MCF2L-231ENST00000494043 RPL10LQ96L21 214 aaKnown RBP11.58□□□□□ -0.56
MCF2L-231ENST00000494043 MLPHQ9BV36 600 aaPredicted RBP11.58□□□□□ -0.56
MCF2L-231ENST00000494043 CIPCQ9C0C6 399 aa11.58□□□□□ -0.56
MCF2L-231ENST00000494043 EIF2B3Q9NR50 452 aaKnown RBP11.58□□□□□ -0.56
MCF2L-231ENST00000494043 THEGQ9P2T0 379 aa11.58□□□□□ -0.56
MCF2L-231ENST00000494043 PRKAG3Q9UGI9 489 aa11.58□□□□□ -0.56
MCF2L-231ENST00000494043 ERVW-1Q9UQF0 538 aa11.58□□□□□ -0.56
MCF2L-231ENST00000494043 FCF1Q9Y324 198 aaKnown RBP11.58□□□□□ -0.56
MCF2L-231ENST00000494043 TICRRQ7Z2Z1 1910 aa11.57□□□□□ -0.56
MCF2L-231ENST00000494043 TCRBV7S3A2A0A539 114 aa11.57□□□□□ -0.56
MCF2L-231ENST00000494043 GOLGA6CA6NDK9 693 aa11.57□□□□□ -0.56
MCF2L-231ENST00000494043 GOLGA6BA6NDN3 693 aa11.57□□□□□ -0.56
MCF2L-231ENST00000494043 ERI2A8K979 691 aaKnown RBP11.57□□□□□ -0.56
MCF2L-231ENST00000494043 SPECC1L-ADORA2AF8WAN1 911 aa11.57□□□□□ -0.56
MCF2L-231ENST00000494043 SMAD6O43541 496 aaKnown RBP11.57□□□□□ -0.56
MCF2L-231ENST00000494043 TIMM44O43615 452 aa11.57□□□□□ -0.56
MCF2L-231ENST00000494043 ANXA9O76027 345 aa11.57□□□□□ -0.56
MCF2L-231ENST00000494043 KAT7O95251 611 aa11.57□□□□□ -0.56
MCF2L-231ENST00000494043 APODP05090 189 aa11.57□□□□□ -0.56
MCF2L-231ENST00000494043 ATP5BP06576 529 aaKnown RBP11.57□□□□□ -0.56
MCF2L-231ENST00000494043 SRPRAP08240 638 aaKnown RBP11.57□□□□□ -0.56
MCF2L-231ENST00000494043 MMP2P08253 660 aa11.57□□□□□ -0.56
MCF2L-231ENST00000494043 DLDP09622 509 aaKnown RBP11.57□□□□□ -0.56
MCF2L-231ENST00000494043 GOLGA6DP0CG33 693 aa11.57□□□□□ -0.56
MCF2L-231ENST00000494043 SRCP12931 536 aa11.57□□□□□ -0.56
MCF2L-231ENST00000494043 CR2P20023 1033 aa11.57□□□□□ -0.56
MCF2L-231ENST00000494043 CTHP32929 405 aa11.57□□□□□ -0.56
MCF2L-231ENST00000494043 GRIA2P42262 883 aa11.57□□□□□ -0.56
MCF2L-231ENST00000494043 RGRP47804 291 aa11.57□□□□□ -0.56
MCF2L-231ENST00000494043 LMAN1P49257 510 aa11.57□□□□□ -0.56
MCF2L-231ENST00000494043 VASPP50552 380 aaPredicted RBP11.57□□□□□ -0.56
MCF2L-231ENST00000494043 GEMP55040 296 aa11.57□□□□□ -0.56
MCF2L-231ENST00000494043 CDK16Q00536 496 aa11.57□□□□□ -0.56
MCF2L-231ENST00000494043 PFKPQ01813 784 aa11.57□□□□□ -0.56
MCF2L-231ENST00000494043 DSC2Q02487 901 aa11.57□□□□□ -0.56
MCF2L-231ENST00000494043 ZP2Q05996 745 aa11.57□□□□□ -0.56
MCF2L-231ENST00000494043 ITKQ08881 620 aa11.57□□□□□ -0.56
MCF2L-231ENST00000494043 TDGQ13569 410 aa11.57□□□□□ -0.56
MCF2L-231ENST00000494043 BRD3Q15059 726 aa11.57□□□□□ -0.56
MCF2L-231ENST00000494043 KCTD11Q693B1 232 aa11.57□□□□□ -0.56
MCF2L-231ENST00000494043 C22orf39Q6P5X5 142 aa11.57□□□□□ -0.56
MCF2L-231ENST00000494043 PRPF39Q86UA1 669 aaKnown RBP11.57□□□□□ -0.56
MCF2L-231ENST00000494043 ADHFE1Q8IWW8 467 aa11.57□□□□□ -0.56
MCF2L-231ENST00000494043 SUGP1Q8IWZ8 645 aaKnown RBP11.57□□□□□ -0.56
MCF2L-231ENST00000494043 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.57□□□□□ -0.56
MCF2L-231ENST00000494043 SPATA22Q8NHS9 363 aa11.57□□□□□ -0.56
MCF2L-231ENST00000494043 ARRDC2Q8TBH0 407 aa11.57□□□□□ -0.56
MCF2L-231ENST00000494043 CYB5D2Q8WUJ1 264 aa11.57□□□□□ -0.56
MCF2L-231ENST00000494043 SORCS1Q8WY21 1168 aa11.57□□□□□ -0.56
MCF2L-231ENST00000494043 ISG20Q96AZ6 181 aaKnown RBP11.57□□□□□ -0.56
MCF2L-231ENST00000494043 TADA1Q96BN2 335 aa11.57□□□□□ -0.56
MCF2L-231ENST00000494043 EXOC2Q96KP1 924 aa11.57□□□□□ -0.56
MCF2L-231ENST00000494043 MRGPRX3Q96LB0 322 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms