RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 WBP2Q969T9 261 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 AZIN2Q96A70 460 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 ZNF778Q96MU6 729 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 AGAP2Q99490 1192 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 FSD1LQ9BXM9 530 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 ZNF334Q9HCZ1 680 aaPredicted RBP10.81□□□□□ -0.68
CLCN6-208ENST00000494028 ENTPD7Q9NQZ7 604 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 CHRAC1Q9NRG0 131 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 SNX15Q9NRS6 342 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 TREX1Q9NSU2 369 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 C20orf96Q9NUD7 363 aaPredicted RBP10.81□□□□□ -0.68
CLCN6-208ENST00000494028 HAUS2Q9NVX0 235 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 SPG21Q9NZD8 308 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 SIRPGQ9P1W8 387 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 KLHL14Q9P2G3 628 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 GGT7Q9UJ14 662 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 BRCA2P51587 3418 aa10.81□□□□□ -0.68
CLCN6-208ENST00000494028 MAGEB16A2A368 324 aa10.8□□□□□ -0.68
CLCN6-208ENST00000494028 CARNS1A5YM72 827 aa10.8□□□□□ -0.68
CLCN6-208ENST00000494028 C2orf78A6NCI8 922 aa10.8□□□□□ -0.68
CLCN6-208ENST00000494028 PLIN3O60664 434 aa10.8□□□□□ -0.68
CLCN6-208ENST00000494028 EFCAB14O75071 495 aa10.8□□□□□ -0.68
CLCN6-208ENST00000494028 SIN3BO75182 1162 aa10.8□□□□□ -0.68
CLCN6-208ENST00000494028 BAIAP3O94812 1187 aa10.8□□□□□ -0.68
CLCN6-208ENST00000494028 KLKB1P03952 638 aa10.8□□□□□ -0.68
CLCN6-208ENST00000494028 PROCP04070 461 aa10.8□□□□□ -0.68
CLCN6-208ENST00000494028 BPGMP07738 259 aa10.8□□□□□ -0.68
CLCN6-208ENST00000494028 ATXN1LP0C7T5 689 aaKnown RBP10.8□□□□□ -0.68
CLCN6-208ENST00000494028 IRF1P10914 325 aa10.8□□□□□ -0.68
CLCN6-208ENST00000494028 PPM1AP35813 382 aa10.8□□□□□ -0.68
CLCN6-208ENST00000494028 GMPRP36959 345 aa10.8□□□□□ -0.68
CLCN6-208ENST00000494028 CD86P42081 329 aa10.8□□□□□ -0.68
CLCN6-208ENST00000494028 SCTRP47872 440 aa10.8□□□□□ -0.68
CLCN6-208ENST00000494028 SLC11A2P49281 568 aa10.8□□□□□ -0.68
CLCN6-208ENST00000494028 CSRP3P50461 194 aa10.8□□□□□ -0.68
CLCN6-208ENST00000494028 RENBPP51606 427 aa10.8□□□□□ -0.68
CLCN6-208ENST00000494028 CCDC15Q0P6D6 951 aa10.8□□□□□ -0.68
CLCN6-208ENST00000494028 TWF1Q12792 350 aa10.8□□□□□ -0.68
CLCN6-208ENST00000494028 SEPT6Q14141 434 aa10.8□□□□□ -0.68
CLCN6-208ENST00000494028 LBRQ14739 615 aaKnown RBP10.8□□□□□ -0.68
CLCN6-208ENST00000494028 PCLAFQ15004 111 aa10.8□□□□□ -0.68
CLCN6-208ENST00000494028 POLD3Q15054 466 aaPredicted RBP10.8□□□□□ -0.68
CLCN6-208ENST00000494028 PCSK7Q16549 785 aa10.8□□□□□ -0.68
CLCN6-208ENST00000494028 GALNTL6Q49A17 601 aa10.8□□□□□ -0.68
CLCN6-208ENST00000494028 HSP90AA5PQ58FG0 334 aa10.8□□□□□ -0.68
CLCN6-208ENST00000494028 RABGAP1LQ5R372 815 aa10.8□□□□□ -0.68
CLCN6-208ENST00000494028 MARC1Q5VT66 337 aa10.8□□□□□ -0.68
CLCN6-208ENST00000494028 ALG1LQ6GMV1 187 aa10.8□□□□□ -0.68
CLCN6-208ENST00000494028 POTEHQ6S545 545 aa10.8□□□□□ -0.68
CLCN6-208ENST00000494028 RANBP10Q6VN20 620 aa10.8□□□□□ -0.68
CLCN6-208ENST00000494028 TMEM150AQ86TG1 271 aa10.8□□□□□ -0.68
CLCN6-208ENST00000494028 C10orf67Q8IYJ2 551 aa10.8□□□□□ -0.68
CLCN6-208ENST00000494028 CCDC63Q8NA47 563 aa10.8□□□□□ -0.68
CLCN6-208ENST00000494028 OR7D4Q8NG98 312 aa10.8□□□□□ -0.68
CLCN6-208ENST00000494028 ARRDC2Q8TBH0 407 aa10.8□□□□□ -0.68
CLCN6-208ENST00000494028 RAB3IL1Q8TBN0 382 aa10.8□□□□□ -0.68
CLCN6-208ENST00000494028 ZNF398Q8TD17 642 aa10.8□□□□□ -0.68
CLCN6-208ENST00000494028 THOC1Q96FV9 657 aaKnown RBP10.8□□□□□ -0.68
CLCN6-208ENST00000494028 PAWRQ96IZ0 340 aaKnown RBP10.8□□□□□ -0.68
CLCN6-208ENST00000494028 VPS39Q96JC1 886 aa10.8□□□□□ -0.68
CLCN6-208ENST00000494028 ZFRQ96KR1 1074 aaKnown RBP10.8□□□□□ -0.68
CLCN6-208ENST00000494028 RANBP9Q96S59 729 aa10.8□□□□□ -0.68
CLCN6-208ENST00000494028 GPR22Q99680 433 aa10.8□□□□□ -0.68
CLCN6-208ENST00000494028 TSSK1BQ9BXA7 367 aa10.8□□□□□ -0.68
CLCN6-208ENST00000494028 KLF16Q9BXK1 252 aaPredicted RBP10.8□□□□□ -0.68
CLCN6-208ENST00000494028 SLC13A1Q9BZW2 595 aa10.8□□□□□ -0.68
CLCN6-208ENST00000494028 NACA2Q9H009 215 aa10.8□□□□□ -0.68
CLCN6-208ENST00000494028 ZBP1Q9H171 429 aa10.8□□□□□ -0.68
CLCN6-208ENST00000494028 MANSC1Q9H8J5 431 aa10.8□□□□□ -0.68
CLCN6-208ENST00000494028 ARNT2Q9HBZ2 717 aa10.8□□□□□ -0.68
CLCN6-208ENST00000494028 VPS45Q9NRW7 570 aa10.8□□□□□ -0.68
CLCN6-208ENST00000494028 IARS2Q9NSE4 1012 aaKnown RBP10.8□□□□□ -0.68
CLCN6-208ENST00000494028 TRPM5Q9NZQ8 1165 aa10.8□□□□□ -0.68
CLCN6-208ENST00000494028 TXNDC16Q9P2K2 825 aa10.8□□□□□ -0.68
CLCN6-208ENST00000494028 USH1CQ9Y6N9 552 aa10.8□□□□□ -0.68
CLCN6-208ENST00000494028 MTCL1Q9Y4B5 1905 aaKnown RBP10.8□□□□□ -0.68
CLCN6-208ENST00000494028 KIAA0100Q14667 2235 aaKnown RBP10.8□□□□□ -0.68
CLCN6-208ENST00000494028 MUSKO15146 869 aa10.79□□□□□ -0.68
CLCN6-208ENST00000494028 TIMM44O43615 452 aa10.79□□□□□ -0.68
CLCN6-208ENST00000494028 GJB3O75712 270 aa10.79□□□□□ -0.68
CLCN6-208ENST00000494028 DNAJC8O75937 253 aaPredicted RBP10.79□□□□□ -0.68
CLCN6-208ENST00000494028 OLFM2O95897 454 aa10.79□□□□□ -0.68
CLCN6-208ENST00000494028 GSRP00390 522 aa10.79□□□□□ -0.68
CLCN6-208ENST00000494028 TROVE2P10155 538 aaKnown RBP eCLIP10.79□□□□□ -0.68
CLCN6-208ENST00000494028 OR1E1P30953 314 aa10.79□□□□□ -0.68
CLCN6-208ENST00000494028 SPRP35270 261 aaPredicted RBP10.79□□□□□ -0.68
CLCN6-208ENST00000494028 ALDH1A3P47895 512 aa10.79□□□□□ -0.68
CLCN6-208ENST00000494028 ARCN1P48444 511 aaKnown RBP10.79□□□□□ -0.68
CLCN6-208ENST00000494028 CDH4P55283 916 aa10.79□□□□□ -0.68
CLCN6-208ENST00000494028 NCALDP61601 193 aa10.79□□□□□ -0.68
CLCN6-208ENST00000494028 RPS24P62847 133 aaKnown RBP10.79□□□□□ -0.68
CLCN6-208ENST00000494028 MPP1Q00013 466 aa10.79□□□□□ -0.68
CLCN6-208ENST00000494028 OCRLQ01968 901 aa10.79□□□□□ -0.68
CLCN6-208ENST00000494028 GNA12Q03113 381 aa10.79□□□□□ -0.68
CLCN6-208ENST00000494028 ZNF235Q14590 738 aa10.79□□□□□ -0.68
CLCN6-208ENST00000494028 SLC14A2Q15849 920 aa10.79□□□□□ -0.68
CLCN6-208ENST00000494028 STXBP5Q5T5C0 1151 aa10.79□□□□□ -0.68
CLCN6-208ENST00000494028 N4BP2L1Q5TBK1 243 aaPredicted RBP10.79□□□□□ -0.68
CLCN6-208ENST00000494028 FYB2Q5VWT5 728 aa10.79□□□□□ -0.68
CLCN6-208ENST00000494028 ESRP1Q6NXG1 681 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms