RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 GALNT3Q14435 633 aa6.52□□□□□ -1.37
SMC2-205ENST00000493955 BECN1Q14457 450 aa6.52□□□□□ -1.37
SMC2-205ENST00000493955 CRYMQ14894 314 aa6.52□□□□□ -1.37
SMC2-205ENST00000493955 TAF11Q15544 211 aa6.52□□□□□ -1.37
SMC2-205ENST00000493955 DPCR1Q3MIW9 517 aa6.52□□□□□ -1.37
SMC2-205ENST00000493955 TMEM268Q5VZI3 342 aa6.52□□□□□ -1.37
SMC2-205ENST00000493955 TAGAPQ8N103 731 aa6.52□□□□□ -1.37
SMC2-205ENST00000493955 NEU4Q8WWR8 484 aaPredicted RBP6.52□□□□□ -1.37
SMC2-205ENST00000493955 RITA1Q96K30 269 aa6.52□□□□□ -1.37
SMC2-205ENST00000493955 MAP7D2Q96T17 732 aa6.52□□□□□ -1.37
SMC2-205ENST00000493955 SLF1Q9BQI6 1058 aa6.52□□□□□ -1.37
SMC2-205ENST00000493955 MXD3Q9BW11 206 aa6.52□□□□□ -1.37
SMC2-205ENST00000493955 TM2D2Q9BX73 214 aa6.52□□□□□ -1.37
SMC2-205ENST00000493955 CXorf56Q9H5V9 222 aa6.52□□□□□ -1.37
SMC2-205ENST00000493955 KAT14Q9H8E8 782 aa6.52□□□□□ -1.37
SMC2-205ENST00000493955 CPNE5Q9HCH3 593 aa6.52□□□□□ -1.37
SMC2-205ENST00000493955 INTS6Q9UL03 887 aaKnown RBP6.52□□□□□ -1.37
SMC2-205ENST00000493955 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.51□□□□□ -1.37
SMC2-205ENST00000493955 TARSL2A2RTX5 802 aaKnown RBP6.51□□□□□ -1.37
SMC2-205ENST00000493955 CXorf65A6NEN9 183 aa6.51□□□□□ -1.37
SMC2-205ENST00000493955 LRRC53A6NM62 1247 aa6.51□□□□□ -1.37
SMC2-205ENST00000493955 EIF3CLB5ME19 914 aaKnown RBP6.51□□□□□ -1.37
SMC2-205ENST00000493955 PAGE4O60829 102 aa6.51□□□□□ -1.37
SMC2-205ENST00000493955 IL1AP01583 271 aa6.51□□□□□ -1.37
SMC2-205ENST00000493955 CHRNA5P30532 468 aa6.51□□□□□ -1.37
SMC2-205ENST00000493955 GARSP41250 739 aaKnown RBP6.51□□□□□ -1.37
SMC2-205ENST00000493955 CACNA2D1P54289 1103 aa6.51□□□□□ -1.37
SMC2-205ENST00000493955 YWHAZP63104 245 aaKnown RBP6.51□□□□□ -1.37
SMC2-205ENST00000493955 CCDC96Q2M329 555 aa6.51□□□□□ -1.37
SMC2-205ENST00000493955 KLHL35Q6PF15 583 aa6.51□□□□□ -1.37
SMC2-205ENST00000493955 AMIGO2Q86SJ2 522 aa6.51□□□□□ -1.37
SMC2-205ENST00000493955 C17orf53Q8N3J3 647 aaPredicted RBP6.51□□□□□ -1.37
SMC2-205ENST00000493955 AMER2Q8N7J2 671 aa6.51□□□□□ -1.37
SMC2-205ENST00000493955 GDPD5Q8WTR4 605 aa6.51□□□□□ -1.37
SMC2-205ENST00000493955 FAR1Q8WVX9 515 aa6.51□□□□□ -1.37
SMC2-205ENST00000493955 H2AFJQ9BTM1 129 aa6.51□□□□□ -1.37
SMC2-205ENST00000493955 MAK16Q9BXY0 300 aaKnown RBP6.51□□□□□ -1.37
SMC2-205ENST00000493955 SMARCAD1Q9H4L7 1026 aa6.51□□□□□ -1.37
SMC2-205ENST00000493955 SH2D4AQ9H788 454 aa6.51□□□□□ -1.37
SMC2-205ENST00000493955 IL17RBQ9NRM6 502 aa6.51□□□□□ -1.37
SMC2-205ENST00000493955 BCCIPQ9P287 314 aaKnown RBP eCLIP6.51□□□□□ -1.37
SMC2-205ENST00000493955 A4GNTQ9UNA3 340 aa6.51□□□□□ -1.37
SMC2-205ENST00000493955 ADAM18Q9Y3Q7 739 aa6.51□□□□□ -1.37
SMC2-205ENST00000493955 PCDHGB5Q9Y5G0 923 aa6.51□□□□□ -1.37
SMC2-205ENST00000493955 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.5□□□□□ -1.37
SMC2-205ENST00000493955 NPIPB8E9PQR5 432 aa6.5□□□□□ -1.37
SMC2-205ENST00000493955 SMIM22K7EJ46 135 aa6.5□□□□□ -1.37
SMC2-205ENST00000493955 RNF8O76064 485 aa6.5□□□□□ -1.37
SMC2-205ENST00000493955 SEC31AO94979 1220 aaKnown RBP6.5□□□□□ -1.37
SMC2-205ENST00000493955 NFATC1O95644 943 aa6.5□□□□□ -1.37
SMC2-205ENST00000493955 DNTTP04053 509 aa6.5□□□□□ -1.37
SMC2-205ENST00000493955 HEXAP06865 529 aa6.5□□□□□ -1.37
SMC2-205ENST00000493955 IRF1P10914 325 aa6.5□□□□□ -1.37
SMC2-205ENST00000493955 ARSFP54793 590 aa6.5□□□□□ -1.37
SMC2-205ENST00000493955 PRAMEP78395 509 aa6.5□□□□□ -1.37
SMC2-205ENST00000493955 ME3Q16798 604 aa6.5□□□□□ -1.37
SMC2-205ENST00000493955 KIAA1755Q5JYT7 1200 aa6.5□□□□□ -1.37
SMC2-205ENST00000493955 TXNDC8Q6A555 127 aa6.5□□□□□ -1.37
SMC2-205ENST00000493955 IGFL4Q6B9Z1 124 aa6.5□□□□□ -1.37
SMC2-205ENST00000493955 SARM1Q6SZW1 724 aa6.5□□□□□ -1.37
SMC2-205ENST00000493955 GPAT4Q86UL3 456 aa6.5□□□□□ -1.37
SMC2-205ENST00000493955 WDR5BQ86VZ2 330 aa6.5□□□□□ -1.37
SMC2-205ENST00000493955 ARHGAP12Q8IWW6 846 aa6.5□□□□□ -1.37
SMC2-205ENST00000493955 ADGRF2Q8IZF7 708 aa6.5□□□□□ -1.37
SMC2-205ENST00000493955 HDAC7Q8WUI4 952 aa6.5□□□□□ -1.37
SMC2-205ENST00000493955 CMTM3Q96MX0 182 aa6.5□□□□□ -1.37
SMC2-205ENST00000493955 ASB2Q96Q27 587 aa6.5□□□□□ -1.37
SMC2-205ENST00000493955 FBRSL1Q9HCM7 1045 aaKnown RBP6.5□□□□□ -1.37
SMC2-205ENST00000493955 MLXIPLQ9NP71 852 aa6.5□□□□□ -1.37
SMC2-205ENST00000493955 SERGEFQ9UGK8 458 aa6.5□□□□□ -1.37
SMC2-205ENST00000493955 IPO11Q9UI26 975 aaKnown RBP6.5□□□□□ -1.37
SMC2-205ENST00000493955 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.5□□□□□ -1.37
SMC2-205ENST00000493955 PASKQ96RG2 1323 aa6.5□□□□□ -1.37
SMC2-205ENST00000493955 A0A1W2PQF6 199 aa6.5□□□□□ -1.37
SMC2-205ENST00000493955 INPPL1O15357 1258 aa6.5□□□□□ -1.37
SMC2-205ENST00000493955 LIASO43766 372 aa6.5□□□□□ -1.37
SMC2-205ENST00000493955 USP12O75317 370 aa6.5□□□□□ -1.37
SMC2-205ENST00000493955 PGM3O95394 542 aa6.5□□□□□ -1.37
SMC2-205ENST00000493955 PLAUP00749 431 aa6.5□□□□□ -1.37
SMC2-205ENST00000493955 SLC2A4P14672 509 aa6.5□□□□□ -1.37
SMC2-205ENST00000493955 GPD1P21695 349 aa6.5□□□□□ -1.37
SMC2-205ENST00000493955 HOXA7P31268 230 aaPredicted RBP6.5□□□□□ -1.37
SMC2-205ENST00000493955 MCM7P33993 719 aa6.5□□□□□ -1.37
SMC2-205ENST00000493955 CALD1Q05682 793 aaKnown RBP6.5□□□□□ -1.37
SMC2-205ENST00000493955 CSTF3Q12996 717 aaKnown RBP6.5□□□□□ -1.37
SMC2-205ENST00000493955 STK4Q13043 487 aa6.5□□□□□ -1.37
SMC2-205ENST00000493955 FRG1Q14331 258 aaKnown RBP6.5□□□□□ -1.37
SMC2-205ENST00000493955 PLEKHS1Q5SXH7 462 aa6.5□□□□□ -1.37
SMC2-205ENST00000493955 AKNAD1Q5T1N1 836 aa6.5□□□□□ -1.37
SMC2-205ENST00000493955 SLC30A6Q6NXT4 461 aa6.5□□□□□ -1.37
SMC2-205ENST00000493955 LRIG3Q6UXM1 1119 aa6.5□□□□□ -1.37
SMC2-205ENST00000493955 KRT74Q7RTS7 529 aa6.5□□□□□ -1.37
SMC2-205ENST00000493955 KRT77Q7Z794 578 aa6.5□□□□□ -1.37
SMC2-205ENST00000493955 CHSY1Q86X52 802 aa6.5□□□□□ -1.37
SMC2-205ENST00000493955 TMEM170AQ8WVE7 144 aa6.5□□□□□ -1.37
SMC2-205ENST00000493955 LARP4BQ92615 738 aaKnown RBP6.5□□□□□ -1.37
SMC2-205ENST00000493955 GTF3C6Q969F1 213 aa6.5□□□□□ -1.37
SMC2-205ENST00000493955 SARAFQ96BY9 339 aa6.5□□□□□ -1.37
SMC2-205ENST00000493955 WDFY2Q96P53 400 aa6.5□□□□□ -1.37
SMC2-205ENST00000493955 GLIS2Q9BZE0 524 aaPredicted RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms