RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 MLLT6P55198 1093 aaPredicted RBP13.99□□□□□ -0.17
VCP-207ENST00000493886 NRG1Q02297 640 aaPredicted RBP13.99□□□□□ -0.17
VCP-207ENST00000493886 PDE1CQ14123 709 aaPredicted RBP13.99□□□□□ -0.17
VCP-207ENST00000493886 MRPL58Q14197 206 aaKnown RBP13.99□□□□□ -0.17
VCP-207ENST00000493886 GPNMBQ14956 572 aa13.99□□□□□ -0.17
VCP-207ENST00000493886 HSF5Q4G112 596 aaPredicted RBP13.99□□□□□ -0.17
VCP-207ENST00000493886 LRRC23Q53EV4 343 aaPredicted RBP13.99□□□□□ -0.17
VCP-207ENST00000493886 KYAT3Q6YP21 454 aaKnown RBP13.99□□□□□ -0.17
VCP-207ENST00000493886 ARHGAP18Q8N392 663 aa13.99□□□□□ -0.17
VCP-207ENST00000493886 RTL3Q8N8U3 475 aaKnown RBP13.99□□□□□ -0.17
VCP-207ENST00000493886 SLC39A13Q96H72 371 aa13.99□□□□□ -0.17
VCP-207ENST00000493886 B3GALT6Q96L58 329 aa13.99□□□□□ -0.17
VCP-207ENST00000493886 IL12RB2Q99665 862 aa13.99□□□□□ -0.17
VCP-207ENST00000493886 EBF4Q9BQW3 602 aa13.99□□□□□ -0.17
VCP-207ENST00000493886 TMEM98Q9Y2Y6 226 aa13.99□□□□□ -0.17
VCP-207ENST00000493886 PLXNA3P51805 1871 aa13.99□□□□□ -0.17
VCP-207ENST00000493886 MATN3O15232 486 aa13.99□□□□□ -0.17
VCP-207ENST00000493886 BIRC5O15392 142 aa13.99□□□□□ -0.17
VCP-207ENST00000493886 GLRA3O75311 464 aa13.99□□□□□ -0.17
VCP-207ENST00000493886 LYPLA1O75608 230 aaPredicted RBP13.99□□□□□ -0.17
VCP-207ENST00000493886 GNRH1P01148 92 aa13.99□□□□□ -0.17
VCP-207ENST00000493886 LINGO3P0C6S8 592 aa13.99□□□□□ -0.17
VCP-207ENST00000493886 MXRA7P84157 204 aa13.99□□□□□ -0.17
VCP-207ENST00000493886 UBAP2LQ14157 1087 aaKnown RBP13.99□□□□□ -0.17
VCP-207ENST00000493886 STXBP5Q5T5C0 1151 aa13.99□□□□□ -0.17
VCP-207ENST00000493886 PIK3R6Q5UE93 754 aa13.99□□□□□ -0.17
VCP-207ENST00000493886 LINC00523Q86TU6 105 aa13.99□□□□□ -0.17
VCP-207ENST00000493886 SLAIN1Q8ND83 568 aa13.99□□□□□ -0.17
VCP-207ENST00000493886 SPATA22Q8NHS9 363 aa13.99□□□□□ -0.17
VCP-207ENST00000493886 GPR152Q8TDT2 470 aa13.99□□□□□ -0.17
VCP-207ENST00000493886 ZNF419Q96HQ0 510 aaPredicted RBP13.99□□□□□ -0.17
VCP-207ENST00000493886 CASD1Q96PB1 797 aa13.99□□□□□ -0.17
VCP-207ENST00000493886 SHCBP1LQ9BZQ2 653 aa13.99□□□□□ -0.17
VCP-207ENST00000493886 CHRAC1Q9NRG0 131 aa13.99□□□□□ -0.17
VCP-207ENST00000493886 STOML1Q9UBI4 398 aa13.99□□□□□ -0.17
VCP-207ENST00000493886 SOX13Q9UN79 622 aa13.99□□□□□ -0.17
VCP-207ENST00000493886 AAR2Q9Y312 384 aaKnown RBP13.99□□□□□ -0.17
VCP-207ENST00000493886 OR6C75A6NL08 312 aa13.98□□□□□ -0.17
VCP-207ENST00000493886 AP3B1O00203 1094 aa13.98□□□□□ -0.17
VCP-207ENST00000493886 ARPP19P56211 112 aa13.98□□□□□ -0.17
VCP-207ENST00000493886 TBX4P57082 545 aa13.98□□□□□ -0.17
VCP-207ENST00000493886 BFSP2Q13515 415 aa13.98□□□□□ -0.17
VCP-207ENST00000493886 N4BP2L1Q5TBK1 243 aaPredicted RBP13.98□□□□□ -0.17
VCP-207ENST00000493886 AFMIDQ63HM1 303 aa13.98□□□□□ -0.17
VCP-207ENST00000493886 LMNTD2Q8IXW0 634 aa13.98□□□□□ -0.17
VCP-207ENST00000493886 SCG3Q8WXD2 468 aaKnown RBP13.98□□□□□ -0.17
VCP-207ENST00000493886 ATP2A3Q93084 1043 aa13.98□□□□□ -0.17
VCP-207ENST00000493886 C1orf74Q96LT6 269 aa13.98□□□□□ -0.17
VCP-207ENST00000493886 C7orf26Q96N11 449 aa13.98□□□□□ -0.17
VCP-207ENST00000493886 FCRL5Q96RD9 977 aa13.98□□□□□ -0.17
VCP-207ENST00000493886 PPP1R12CQ9BZL4 782 aa13.98□□□□□ -0.17
VCP-207ENST00000493886 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.98□□□□□ -0.17
VCP-207ENST00000493886 GLOD4Q9HC38 313 aa13.98□□□□□ -0.17
VCP-207ENST00000493886 UTP6Q9NYH9 597 aaKnown RBP13.98□□□□□ -0.17
VCP-207ENST00000493886 IL37Q9NZH6 218 aa13.98□□□□□ -0.17
VCP-207ENST00000493886 PSMG1O95456 288 aa13.98□□□□□ -0.17
VCP-207ENST00000493886 MT-CYBP00156 380 aaPredicted RBP13.98□□□□□ -0.17
VCP-207ENST00000493886 SLC2A3P11169 496 aa13.98□□□□□ -0.17
VCP-207ENST00000493886 HSP90AA5PQ58FG0 334 aa13.98□□□□□ -0.17
VCP-207ENST00000493886 TEDDM1Q5T9Z0 273 aa13.98□□□□□ -0.17
VCP-207ENST00000493886 STRA8Q7Z7C7 330 aa13.98□□□□□ -0.17
VCP-207ENST00000493886 RBM15BQ8NDT2 890 aaKnown RBP13.98□□□□□ -0.17
VCP-207ENST00000493886 PPP1R14CQ8TAE6 165 aa13.98□□□□□ -0.17
VCP-207ENST00000493886 RAB3IL1Q8TBN0 382 aa13.98□□□□□ -0.17
VCP-207ENST00000493886 AGAP2Q99490 1192 aa13.98□□□□□ -0.17
VCP-207ENST00000493886 RBBP8Q99708 897 aa13.98□□□□□ -0.17
VCP-207ENST00000493886 MARCH5Q9NX47 278 aa13.98□□□□□ -0.17
VCP-207ENST00000493886 DCDC2Q9UHG0 476 aa13.98□□□□□ -0.17
VCP-207ENST00000493886 EMCNQ9ULC0 261 aa13.98□□□□□ -0.17
VCP-207ENST00000493886 SOAT2O75908 522 aa13.97□□□□□ -0.17
VCP-207ENST00000493886 ALDH2P05091 517 aa13.97□□□□□ -0.17
VCP-207ENST00000493886 DNAJB2P25686 324 aa13.97□□□□□ -0.17
VCP-207ENST00000493886 TYK2P29597 1187 aa13.97□□□□□ -0.17
VCP-207ENST00000493886 SPRP35270 261 aaPredicted RBP13.97□□□□□ -0.17
VCP-207ENST00000493886 CDK7P50613 346 aa13.97□□□□□ -0.17
VCP-207ENST00000493886 EFEMP1Q12805 493 aa13.97□□□□□ -0.17
VCP-207ENST00000493886 SPDYAQ5MJ70 313 aa13.97□□□□□ -0.17
VCP-207ENST00000493886 TIGD7Q6NT04 549 aaPredicted RBP13.97□□□□□ -0.17
VCP-207ENST00000493886 TMEM154Q6P9G4 183 aa13.97□□□□□ -0.17
VCP-207ENST00000493886 KCNMB4Q86W47 210 aa13.97□□□□□ -0.17
VCP-207ENST00000493886 FBXO32Q969P5 355 aa13.97□□□□□ -0.17
VCP-207ENST00000493886 TBL1YQ9BQ87 522 aa13.97□□□□□ -0.17
VCP-207ENST00000493886 THTPAQ9BU02 230 aa13.97□□□□□ -0.17
VCP-207ENST00000493886 HCSTQ9UBK5 93 aa13.97□□□□□ -0.17
VCP-207ENST00000493886 WASH4PA8MWX3 477 aa13.97□□□□□ -0.17
VCP-207ENST00000493886 ANXA9O76027 345 aa13.97□□□□□ -0.17
VCP-207ENST00000493886 CPB1P15086 417 aa13.97□□□□□ -0.17
VCP-207ENST00000493886 FGFR3P22607 806 aa13.97□□□□□ -0.17
VCP-207ENST00000493886 YWHAQP27348 245 aa13.97□□□□□ -0.17
VCP-207ENST00000493886 NMBRP28336 390 aa13.97□□□□□ -0.17
VCP-207ENST00000493886 VHLP40337 213 aa13.97□□□□□ -0.17
VCP-207ENST00000493886 SLC11A1P49279 550 aa13.97□□□□□ -0.17
VCP-207ENST00000493886 PAPOLAP51003 745 aaKnown RBP13.97□□□□□ -0.17
VCP-207ENST00000493886 RPL10AP62906 217 aaKnown RBP13.97□□□□□ -0.17
VCP-207ENST00000493886 OCRLQ01968 901 aa13.97□□□□□ -0.17
VCP-207ENST00000493886 LRRC74BQ6ZQY2 392 aa13.97□□□□□ -0.17
VCP-207ENST00000493886 FAM126BQ8IXS8 530 aa13.97□□□□□ -0.17
VCP-207ENST00000493886 DCLK2Q8N568 766 aa13.97□□□□□ -0.17
VCP-207ENST00000493886 IPMKQ8NFU5 416 aa13.97□□□□□ -0.17
VCP-207ENST00000493886 ZNF333Q96JL9 665 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms