RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 VAT1Q99536 393 aa19.69■□□□□ 0.74
USP39-218ENST00000493829 MTG2Q9H4K7 406 aa19.69■□□□□ 0.74
USP39-218ENST00000493829 PAK5Q9P286 719 aa19.69■□□□□ 0.74
USP39-218ENST00000493829 LHX3Q9UBR4 397 aa19.69■□□□□ 0.74
USP39-218ENST00000493829 DMGDHQ9UI17 866 aaKnown RBP19.69■□□□□ 0.74
USP39-218ENST00000493829 NDRG2Q9UN36 371 aaKnown RBP19.69■□□□□ 0.74
USP39-218ENST00000493829 HS3ST2Q9Y278 367 aa19.69■□□□□ 0.74
USP39-218ENST00000493829 TTC34A8MYJ7 566 aa19.68■□□□□ 0.74
USP39-218ENST00000493829 ASLP04424 464 aa19.68■□□□□ 0.74
USP39-218ENST00000493829 ITPRIPL1Q6GPH6 555 aa19.68■□□□□ 0.74
USP39-218ENST00000493829 SYDE1Q6ZW31 735 aaPredicted RBP19.68■□□□□ 0.74
USP39-218ENST00000493829 GJD3Q8N144 294 aa19.68■□□□□ 0.74
USP39-218ENST00000493829 FAM3CQ92520 227 aa19.68■□□□□ 0.74
USP39-218ENST00000493829 GBA3Q9H227 469 aa19.68■□□□□ 0.74
USP39-218ENST00000493829 ARHGEF3Q9NR81 526 aa19.68■□□□□ 0.74
USP39-218ENST00000493829 RAB6BQ9NRW1 208 aa19.68■□□□□ 0.74
USP39-218ENST00000493829 UBP1Q9NZI7 540 aa19.68■□□□□ 0.74
USP39-218ENST00000493829 TRHDEQ9UKU6 1024 aa19.68■□□□□ 0.74
USP39-218ENST00000493829 PLA2G4CQ9UP65 541 aa19.68■□□□□ 0.74
USP39-218ENST00000493829 SNX24Q9Y343 169 aa19.68■□□□□ 0.74
USP39-218ENST00000493829 UTP11Q9Y3A2 253 aaKnown RBP19.68■□□□□ 0.74
USP39-218ENST00000493829 ZNF189O75820 626 aaPredicted RBP19.68■□□□□ 0.74
USP39-218ENST00000493829 HLA-EP13747 358 aa19.68■□□□□ 0.74
USP39-218ENST00000493829 ST8SIA6P61647 398 aa19.68■□□□□ 0.74
USP39-218ENST00000493829 GRSF1Q12849 480 aaKnown RBP eCLIP19.68■□□□□ 0.74
USP39-218ENST00000493829 ZNF234Q14588 700 aa19.68■□□□□ 0.74
USP39-218ENST00000493829 DLG2Q15700 870 aa19.68■□□□□ 0.74
USP39-218ENST00000493829 INO80DQ53TQ3 878 aaPredicted RBP19.68■□□□□ 0.74
USP39-218ENST00000493829 DGKKQ5KSL6 1271 aa19.68■□□□□ 0.74
USP39-218ENST00000493829 Q6ZVU0 165 aa19.68■□□□□ 0.74
USP39-218ENST00000493829 RYBPQ8N488 228 aaPredicted RBP19.68■□□□□ 0.74
USP39-218ENST00000493829 UCMAQ8WVF2 138 aa19.68■□□□□ 0.74
USP39-218ENST00000493829 UBXN4Q92575 508 aa19.68■□□□□ 0.74
USP39-218ENST00000493829 PSKH2Q96QS6 385 aa19.68■□□□□ 0.74
USP39-218ENST00000493829 ACOX2Q99424 681 aa19.68■□□□□ 0.74
USP39-218ENST00000493829 GLOD4Q9HC38 313 aa19.68■□□□□ 0.74
USP39-218ENST00000493829 ATP8A1Q9Y2Q0 1164 aa19.68■□□□□ 0.74
USP39-218ENST00000493829 SHISA7A6NL88 538 aa19.67■□□□□ 0.74
USP39-218ENST00000493829 K7EQS6 105 aa19.67■□□□□ 0.74
USP39-218ENST00000493829 TIE1P35590 1138 aa19.67■□□□□ 0.74
USP39-218ENST00000493829 WASP42768 502 aa19.67■□□□□ 0.74
USP39-218ENST00000493829 RPL21P46778 160 aaKnown RBP19.67■□□□□ 0.74
USP39-218ENST00000493829 NAA30Q147X3 362 aaPredicted RBP19.67■□□□□ 0.74
USP39-218ENST00000493829 TRADDQ15628 312 aa19.67■□□□□ 0.74
USP39-218ENST00000493829 ERCC6LQ2NKX8 1250 aa19.67■□□□□ 0.74
USP39-218ENST00000493829 TMEM196Q5HYL7 178 aa19.67■□□□□ 0.74
USP39-218ENST00000493829 SERPINA13PQ6UXR4 307 aa19.67■□□□□ 0.74
USP39-218ENST00000493829 NUDT18Q6ZVK8 323 aa19.67■□□□□ 0.74
USP39-218ENST00000493829 SUGP1Q8IWZ8 645 aaKnown RBP19.67■□□□□ 0.74
USP39-218ENST00000493829 SPATA22Q8NHS9 363 aa19.67■□□□□ 0.74
USP39-218ENST00000493829 MYO19Q96H55 970 aa19.67■□□□□ 0.74
USP39-218ENST00000493829 SEMA3CQ99985 751 aa19.67■□□□□ 0.74
USP39-218ENST00000493829 MGME1Q9BQP7 344 aa19.67■□□□□ 0.74
USP39-218ENST00000493829 GORASP1Q9BQQ3 440 aa19.67■□□□□ 0.74
USP39-218ENST00000493829 ERP44Q9BS26 406 aa19.67■□□□□ 0.74
USP39-218ENST00000493829 POLR1EQ9GZS1 481 aaKnown RBP19.67■□□□□ 0.74
USP39-218ENST00000493829 RAB17Q9H0T7 212 aa19.67■□□□□ 0.74
USP39-218ENST00000493829 CACNA2D2Q9NY47 1150 aa19.67■□□□□ 0.74
USP39-218ENST00000493829 HCN2Q9UL51 889 aa19.67■□□□□ 0.74
USP39-218ENST00000493829 SRPRAP08240 638 aaKnown RBP19.66■□□□□ 0.74
USP39-218ENST00000493829 NNMTP40261 264 aa19.66■□□□□ 0.74
USP39-218ENST00000493829 CD86P42081 329 aa19.66■□□□□ 0.74
USP39-218ENST00000493829 SCNN1BP51168 640 aa19.66■□□□□ 0.74
USP39-218ENST00000493829 SLC20A2Q08357 652 aa19.66■□□□□ 0.74
USP39-218ENST00000493829 NIPAL4Q0D2K0 466 aa19.66■□□□□ 0.74
USP39-218ENST00000493829 GLE1Q53GS7 698 aaKnown RBP19.66■□□□□ 0.74
USP39-218ENST00000493829 C2orf27AQ580R0 203 aa19.66■□□□□ 0.74
USP39-218ENST00000493829 IZUMO3Q5VZ72 239 aa19.66■□□□□ 0.74
USP39-218ENST00000493829 SIX5Q8N196 739 aa19.66■□□□□ 0.74
USP39-218ENST00000493829 ZNF513Q8N8E2 541 aaPredicted RBP19.66■□□□□ 0.74
USP39-218ENST00000493829 CCHCR1Q8TD31 782 aa19.66■□□□□ 0.74
USP39-218ENST00000493829 CASKIN2Q8WXE0 1202 aa19.66■□□□□ 0.74
USP39-218ENST00000493829 EXOC4Q96A65 974 aa19.66■□□□□ 0.74
USP39-218ENST00000493829 RBM15Q96T37 977 aaKnown RBP eCLIP19.66■□□□□ 0.74
USP39-218ENST00000493829 ETNK1Q9HBU6 452 aa19.66■□□□□ 0.74
USP39-218ENST00000493829 EPB41L5Q9HCM4 733 aa19.66■□□□□ 0.74
USP39-218ENST00000493829 WASH3PC4AMC7 463 aa19.65■□□□□ 0.74
USP39-218ENST00000493829 E7EVH7 732 aa19.65■□□□□ 0.74
USP39-218ENST00000493829 TIMM44O43615 452 aa19.65■□□□□ 0.74
USP39-218ENST00000493829 ZNF821O75541 412 aaPredicted RBP19.65■□□□□ 0.74
USP39-218ENST00000493829 MT-CYBP00156 380 aaPredicted RBP19.65■□□□□ 0.74
USP39-218ENST00000493829 GLULP15104 373 aa19.65■□□□□ 0.74
USP39-218ENST00000493829 PRKCHP24723 683 aa19.65■□□□□ 0.74
USP39-218ENST00000493829 IL12RB1P42701 662 aa19.65■□□□□ 0.74
USP39-218ENST00000493829 PCSK7Q16549 785 aa19.65■□□□□ 0.74
USP39-218ENST00000493829 OXNAD1Q96HP4 312 aaPredicted RBP19.65■□□□□ 0.74
USP39-218ENST00000493829 SCUBE2Q9NQ36 999 aa19.65■□□□□ 0.74
USP39-218ENST00000493829 KRBA1A5PL33 1030 aa19.65■□□□□ 0.74
USP39-218ENST00000493829 INSIG1O15503 277 aa19.65■□□□□ 0.74
USP39-218ENST00000493829 ATP9BO43861 1147 aa19.65■□□□□ 0.74
USP39-218ENST00000493829 GKP32189 559 aa19.65■□□□□ 0.74
USP39-218ENST00000493829 TNFRSF4P43489 277 aa19.65■□□□□ 0.74
USP39-218ENST00000493829 LMAN1P49257 510 aa19.65■□□□□ 0.74
USP39-218ENST00000493829 PARP6Q2NL67 630 aa19.65■□□□□ 0.74
USP39-218ENST00000493829 DUPD1Q68J44 220 aa19.65■□□□□ 0.74
USP39-218ENST00000493829 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.65■□□□□ 0.74
USP39-218ENST00000493829 CHPFQ8IZ52 775 aa19.65■□□□□ 0.74
USP39-218ENST00000493829 MSANTD3Q96H12 275 aa19.65■□□□□ 0.74
USP39-218ENST00000493829 SNF8Q96H20 258 aa19.65■□□□□ 0.74
USP39-218ENST00000493829 GDAP1L1Q96MZ0 367 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms