RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 PTPN20Q4JDL3 420 aa12.59□□□□□ -0.39
SAMM50-205ENST00000493621 C3orf38Q5JPI3 329 aa12.59□□□□□ -0.39
SAMM50-205ENST00000493621 BRMS1LQ5PSV4 323 aa12.59□□□□□ -0.39
SAMM50-205ENST00000493621 KIAA1161Q6NSJ0 714 aa12.59□□□□□ -0.39
SAMM50-205ENST00000493621 LRRC31Q6UY01 552 aa12.59□□□□□ -0.39
SAMM50-205ENST00000493621 KYAT3Q6YP21 454 aaKnown RBP12.59□□□□□ -0.39
SAMM50-205ENST00000493621 ELOA2Q8IYF1 753 aaPredicted RBP12.59□□□□□ -0.39
SAMM50-205ENST00000493621 ZNF548Q8NEK5 533 aaPredicted RBP12.59□□□□□ -0.39
SAMM50-205ENST00000493621 OR7D4Q8NG98 312 aa12.59□□□□□ -0.39
SAMM50-205ENST00000493621 SHC3Q92529 594 aa12.59□□□□□ -0.39
SAMM50-205ENST00000493621 VCPIP1Q96JH7 1222 aa12.59□□□□□ -0.39
SAMM50-205ENST00000493621 NPY6RQ99463 290 aa12.59□□□□□ -0.39
SAMM50-205ENST00000493621 SPON2Q9BUD6 331 aa12.59□□□□□ -0.39
SAMM50-205ENST00000493621 PLCB1Q9NQ66 1216 aa12.59□□□□□ -0.39
SAMM50-205ENST00000493621 TMPRSS4Q9NRS4 437 aa12.59□□□□□ -0.39
SAMM50-205ENST00000493621 THSD1Q9NS62 852 aa12.59□□□□□ -0.39
SAMM50-205ENST00000493621 GPR27Q9NS67 375 aa12.59□□□□□ -0.39
SAMM50-205ENST00000493621 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.59□□□□□ -0.39
SAMM50-205ENST00000493621 APEX2Q9UBZ4 518 aa12.59□□□□□ -0.39
SAMM50-205ENST00000493621 IPO11Q9UI26 975 aaKnown RBP12.59□□□□□ -0.39
SAMM50-205ENST00000493621 SATB2Q9UPW6 733 aa12.59□□□□□ -0.39
SAMM50-205ENST00000493621 WASF2Q9Y6W5 498 aa12.59□□□□□ -0.39
SAMM50-205ENST00000493621 SPTY2D1-AS1A0A0U1RR47 76 aa12.58□□□□□ -0.4
SAMM50-205ENST00000493621 CPED1A4D0V7 1026 aa12.58□□□□□ -0.4
SAMM50-205ENST00000493621 DRGXA6NNA5 263 aa12.58□□□□□ -0.4
SAMM50-205ENST00000493621 H3BM21 787 aa12.58□□□□□ -0.4
SAMM50-205ENST00000493621 FGFR1OPO95684 399 aaKnown RBP12.58□□□□□ -0.4
SAMM50-205ENST00000493621 CSF2P04141 144 aa12.58□□□□□ -0.4
SAMM50-205ENST00000493621 ADRB3P13945 408 aa12.58□□□□□ -0.4
SAMM50-205ENST00000493621 NME1P15531 152 aaKnown RBP12.58□□□□□ -0.4
SAMM50-205ENST00000493621 TGM2P21980 687 aa12.58□□□□□ -0.4
SAMM50-205ENST00000493621 OR1E1P30953 314 aa12.58□□□□□ -0.4
SAMM50-205ENST00000493621 KRT9P35527 623 aa12.58□□□□□ -0.4
SAMM50-205ENST00000493621 DNA2P51530 1060 aa12.58□□□□□ -0.4
SAMM50-205ENST00000493621 PTK2Q05397 1052 aa12.58□□□□□ -0.4
SAMM50-205ENST00000493621 DEUP1Q05D60 604 aa12.58□□□□□ -0.4
SAMM50-205ENST00000493621 ISXQ2M1V0 245 aa12.58□□□□□ -0.4
SAMM50-205ENST00000493621 ZCCHC8Q6NZY4 707 aaKnown RBP12.58□□□□□ -0.4
SAMM50-205ENST00000493621 GUSBP11Q6P575 273 aa12.58□□□□□ -0.4
SAMM50-205ENST00000493621 GBP6Q6ZN66 633 aa12.58□□□□□ -0.4
SAMM50-205ENST00000493621 EFL1Q7Z2Z2 1120 aaKnown RBP12.58□□□□□ -0.4
SAMM50-205ENST00000493621 PARGQ86W56 976 aa12.58□□□□□ -0.4
SAMM50-205ENST00000493621 ZNF397Q8NF99 534 aaPredicted RBP12.58□□□□□ -0.4
SAMM50-205ENST00000493621 WBP1Q96G27 269 aa12.58□□□□□ -0.4
SAMM50-205ENST00000493621 ATXN7L3BQ96GX2 97 aa12.58□□□□□ -0.4
SAMM50-205ENST00000493621 FEM1CQ96JP0 617 aa12.58□□□□□ -0.4
SAMM50-205ENST00000493621 TBCBQ99426 244 aa12.58□□□□□ -0.4
SAMM50-205ENST00000493621 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.58□□□□□ -0.4
SAMM50-205ENST00000493621 DPH1Q9BZG8 443 aa12.58□□□□□ -0.4
SAMM50-205ENST00000493621 RRN3Q9NYV6 651 aa12.58□□□□□ -0.4
SAMM50-205ENST00000493621 AJAP1Q9UKB5 411 aaPredicted RBP12.58□□□□□ -0.4
SAMM50-205ENST00000493621 STAP1Q9ULZ2 295 aa12.58□□□□□ -0.4
SAMM50-205ENST00000493621 FADS3Q9Y5Q0 445 aa12.58□□□□□ -0.4
SAMM50-205ENST00000493621 IGLV3-10A0A075B6K4 115 aa12.57□□□□□ -0.4
SAMM50-205ENST00000493621 A0A1W2PNU3 283 aaPredicted RBP12.57□□□□□ -0.4
SAMM50-205ENST00000493621 FAM170AA1A519 330 aa12.57□□□□□ -0.4
SAMM50-205ENST00000493621 AQP9O43315 295 aa12.57□□□□□ -0.4
SAMM50-205ENST00000493621 SRGAP2O75044 1071 aa12.57□□□□□ -0.4
SAMM50-205ENST00000493621 ZNF821O75541 412 aaPredicted RBP12.57□□□□□ -0.4
SAMM50-205ENST00000493621 PNMA6AP0CW24 399 aaPredicted RBP12.57□□□□□ -0.4
SAMM50-205ENST00000493621 JUNDP17535 347 aa12.57□□□□□ -0.4
SAMM50-205ENST00000493621 ITGB7P26010 798 aa12.57□□□□□ -0.4
SAMM50-205ENST00000493621 RBMS1P29558 406 aaKnown RBP12.57□□□□□ -0.4
SAMM50-205ENST00000493621 L1CAMP32004 1257 aa12.57□□□□□ -0.4
SAMM50-205ENST00000493621 RABIFP47224 123 aa12.57□□□□□ -0.4
SAMM50-205ENST00000493621 SERPINH1P50454 418 aaKnown RBP12.57□□□□□ -0.4
SAMM50-205ENST00000493621 CCNHP51946 323 aaPredicted RBP12.57□□□□□ -0.4
SAMM50-205ENST00000493621 VAC14Q08AM6 782 aa12.57□□□□□ -0.4
SAMM50-205ENST00000493621 SGCGQ13326 291 aa12.57□□□□□ -0.4
SAMM50-205ENST00000493621 PDE1CQ14123 709 aaPredicted RBP12.57□□□□□ -0.4
SAMM50-205ENST00000493621 LY6DQ14210 128 aa12.57□□□□□ -0.4
SAMM50-205ENST00000493621 EXOC3L4Q17RC7 722 aa12.57□□□□□ -0.4
SAMM50-205ENST00000493621 DEFB133Q30KQ1 61 aa12.57□□□□□ -0.4
SAMM50-205ENST00000493621 CARD16Q5EG05 197 aa12.57□□□□□ -0.4
SAMM50-205ENST00000493621 TPRG1LQ5T0D9 272 aa12.57□□□□□ -0.4
SAMM50-205ENST00000493621 RETSATQ6NUM9 610 aa12.57□□□□□ -0.4
SAMM50-205ENST00000493621 CRTC1Q6UUV9 634 aa12.57□□□□□ -0.4
SAMM50-205ENST00000493621 PARS2Q7L3T8 475 aaKnown RBP12.57□□□□□ -0.4
SAMM50-205ENST00000493621 SLC47A2Q86VL8 602 aa12.57□□□□□ -0.4
SAMM50-205ENST00000493621 ZDHHC17Q8IUH5 632 aa12.57□□□□□ -0.4
SAMM50-205ENST00000493621 PCDH20Q8N6Y1 951 aaKnown RBP12.57□□□□□ -0.4
SAMM50-205ENST00000493621 LMX1AQ8TE12 382 aa12.57□□□□□ -0.4
SAMM50-205ENST00000493621 HEPHQ9BQS7 1158 aa12.57□□□□□ -0.4
SAMM50-205ENST00000493621 SEMA4CQ9C0C4 833 aa12.57□□□□□ -0.4
SAMM50-205ENST00000493621 CEP44Q9C0F1 390 aa12.57□□□□□ -0.4
SAMM50-205ENST00000493621 ZDHHC6Q9H6R6 413 aa12.57□□□□□ -0.4
SAMM50-205ENST00000493621 ATP13A1Q9HD20 1204 aa12.57□□□□□ -0.4
SAMM50-205ENST00000493621 KLF15Q9UIH9 416 aa12.57□□□□□ -0.4
SAMM50-205ENST00000493621 FCF1Q9Y324 198 aaKnown RBP12.57□□□□□ -0.4
SAMM50-205ENST00000493621 PAXBP1Q9Y5B6 917 aa12.57□□□□□ -0.4
SAMM50-205ENST00000493621 CSNK1G3Q9Y6M4 447 aa12.57□□□□□ -0.4
SAMM50-205ENST00000493621 PIEZO2Q9H5I5 2752 aa12.57□□□□□ -0.4
SAMM50-205ENST00000493621 CHD5Q8TDI0 1954 aa12.56□□□□□ -0.4
SAMM50-205ENST00000493621 MYO18BQ8IUG5 2567 aa12.56□□□□□ -0.4
SAMM50-205ENST00000493621 ILVBLA1L0T0 632 aa12.56□□□□□ -0.4
SAMM50-205ENST00000493621 IGLON5A6NGN9 336 aa12.56□□□□□ -0.4
SAMM50-205ENST00000493621 FPGTO14772 594 aa12.56□□□□□ -0.4
SAMM50-205ENST00000493621 AP1G1O43747 822 aa12.56□□□□□ -0.4
SAMM50-205ENST00000493621 LZTS3O60299 673 aaPredicted RBP12.56□□□□□ -0.4
SAMM50-205ENST00000493621 ZMPSTE24O75844 475 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms