RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 NEMP1O14524 444 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 MID1O15344 667 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 SMAD6O43541 496 aaKnown RBP8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 CST8O60676 142 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 TJP3O95049 919 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 FTCDO95954 541 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 TDGF1P13385 188 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 TGM2P21980 687 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 CA4P22748 312 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 CD6P30203 668 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 CTNNA1P35221 906 aaKnown RBP8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 HSPA9P38646 679 aaKnown RBP8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 NBL1P41271 181 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 NR2C2P49116 596 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 TPMTP51580 245 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 CCNHP51946 323 aaPredicted RBP8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 COPAP53621 1224 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 RPS14P62263 151 aaKnown RBP8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 ARF5P84085 180 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 CCZ1BP86790 482 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 CCZ1P86791 482 aaPredicted RBP8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 NHLH1Q02575 133 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 DMWDQ09019 674 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 AP1B1Q10567 949 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 LBRQ14739 615 aaKnown RBP8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 PAFAH1B3Q15102 231 aaKnown RBP8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 RPS6KA1Q15418 735 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 WDR45BQ5MNZ6 344 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 MARC1Q5VT66 337 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 LAIR1Q6GTX8 287 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 FBXL19Q6PCT2 694 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 MFSD7Q6UXD7 560 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 SPOCD1Q6ZMY3 1216 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 USP30Q70CQ3 517 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 CPNE8Q86YQ8 564 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 RGL4Q8IZJ4 473 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 HDDC3Q8N4P3 179 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 TMIEQ8NEW7 156 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 OR2AP1Q8NGE2 309 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 PCDH19Q8TAB3 1148 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 PIP4K2CQ8TBX8 421 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 FAM71BQ8TC56 605 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 GRIN3AQ8TCU5 1115 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 RLN3Q8WXF3 142 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 SNX19Q92543 992 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 TSC1Q92574 1164 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 P3H4Q92791 437 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 HAUS1Q96CS2 278 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 MYO19Q96H55 970 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 LRIG1Q96JA1 1093 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 OSBPL1AQ9BXW6 950 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 MKRN2Q9H000 416 aaKnown RBP8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 BRD8Q9H0E9 1235 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 SLC6A17Q9H1V8 727 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 PABPC3Q9H361 631 aaKnown RBP8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 MTG2Q9H4K7 406 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 ATP13A3Q9H7F0 1226 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 SGK2Q9HBY8 427 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 ITM2CQ9NQX7 267 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 ETNK2Q9NVF9 386 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 SEPT10Q9P0V9 454 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 TRIM10Q9UDY6 481 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 SALL4Q9UJQ4 1053 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 SMG5Q9UPR3 1016 aaKnown RBP8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 PCDHA3Q9Y5H8 950 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 ABCA7Q8IZY2 2146 aa8.27□□□□□ -1.09
TM4SF1-204ENST00000493348 TBC1D3DA0A087WVF3 549 aa8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 TBC1D3IA0A087WXS9 549 aa8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 TBC1D3EA0A087X179 549 aa8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 TBC1D3KA0A087X1G2 549 aa8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 A0A1W2PP55 124 aa8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 TBC1D3FA6NER0 549 aaPredicted RBP8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 TBC1D3LB9A6J9 549 aa8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 J3KR12 359 aa8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 K7ERQ8 282 aa8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 MFSD11O43934 449 aa8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 KIF5CO60282 957 aa8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 LILRB5O75023 590 aa8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 LEFTY1O75610 366 aa8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 ZNF189O75820 626 aaPredicted RBP8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 ZMPSTE24O75844 475 aa8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 STK10O94804 968 aaKnown RBP8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 TBC1D3HP0C7X1 549 aa8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 KRT10P13645 584 aa8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 VAV1P15498 845 aa8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 GNSP15586 552 aa8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 CES1P23141 567 aa8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 CCNCP24863 283 aa8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 SERPINA4P29622 427 aa8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 P2RY2P41231 377 aa8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 GARSP41250 739 aaKnown RBP8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 MMP13P45452 471 aa8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 SCNN1BP51168 640 aa8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 ARSEP51690 589 aa8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 BCL2L1Q07817 233 aa8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 PPP2R5EQ16537 467 aa8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 LPAL2Q16609 132 aa8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 MYLK3Q32MK0 819 aa8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 POM121L1PQ3SYA9 428 aa8.26□□□□□ -1.09
TM4SF1-204ENST00000493348 ARSIQ5FYB1 569 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms