RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 LINC00854A0A1B0GVQ3 168 aa16.5■□□□□ 0.23
BRAT1-206ENST00000493232 TISP43B9A030 160 aa16.5■□□□□ 0.23
BRAT1-206ENST00000493232 H0YC42 278 aa16.5■□□□□ 0.23
BRAT1-206ENST00000493232 CCNB1P14635 433 aa16.5■□□□□ 0.23
BRAT1-206ENST00000493232 TNFRSF8P28908 595 aa16.5■□□□□ 0.23
BRAT1-206ENST00000493232 CRYBB1P53674 252 aaPredicted RBP16.5■□□□□ 0.23
BRAT1-206ENST00000493232 RHBDL3P58872 404 aa16.5■□□□□ 0.23
BRAT1-206ENST00000493232 TCEA2Q15560 299 aa16.5■□□□□ 0.23
BRAT1-206ENST00000493232 ZNHIT3Q15649 155 aaPredicted RBP16.5■□□□□ 0.23
BRAT1-206ENST00000493232 USP41Q3LFD5 358 aa16.5■□□□□ 0.23
BRAT1-206ENST00000493232 RSBN1Q5VWQ0 802 aaPredicted RBP16.5■□□□□ 0.23
BRAT1-206ENST00000493232 POLNQ7Z5Q5 900 aa16.5■□□□□ 0.23
BRAT1-206ENST00000493232 ALLCQ8N6M5 410 aa16.5■□□□□ 0.23
BRAT1-206ENST00000493232 GEMIN8Q9NWZ8 242 aaKnown RBP16.5■□□□□ 0.23
BRAT1-206ENST00000493232 MYRFQ9Y2G1 1151 aa16.5■□□□□ 0.23
BRAT1-206ENST00000493232 ARIH1Q9Y4X5 557 aaPredicted RBP16.5■□□□□ 0.23
BRAT1-206ENST00000493232 IQGAP1P46940 1657 aa16.49■□□□□ 0.23
BRAT1-206ENST00000493232 FAM237AA0A1B0GTK4 181 aa16.49■□□□□ 0.23
BRAT1-206ENST00000493232 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.49■□□□□ 0.23
BRAT1-206ENST00000493232 GATAD2AQ86YP4 633 aa16.49■□□□□ 0.23
BRAT1-206ENST00000493232 ACMSDQ8TDX5 336 aa16.49■□□□□ 0.23
BRAT1-206ENST00000493232 MCCC1Q96RQ3 725 aaPredicted RBP16.49■□□□□ 0.23
BRAT1-206ENST00000493232 SENP6Q9GZR1 1112 aaPredicted RBP16.49■□□□□ 0.23
BRAT1-206ENST00000493232 ANAPC2Q9UJX6 822 aa16.49■□□□□ 0.23
BRAT1-206ENST00000493232 LRCH1Q9Y2L9 728 aa16.49■□□□□ 0.23
BRAT1-206ENST00000493232 PLSCR1O15162 318 aa16.49■□□□□ 0.23
BRAT1-206ENST00000493232 FTH1P02794 183 aa16.49■□□□□ 0.23
BRAT1-206ENST00000493232 UMPSP11172 480 aa16.49■□□□□ 0.23
BRAT1-206ENST00000493232 LRPAP1P30533 357 aa16.49■□□□□ 0.23
BRAT1-206ENST00000493232 COPZ1P61923 177 aa16.49■□□□□ 0.23
BRAT1-206ENST00000493232 CAPSQ13938 189 aa16.49■□□□□ 0.23
BRAT1-206ENST00000493232 ZCCHC23Q6ZST2 131 aa16.49■□□□□ 0.23
BRAT1-206ENST00000493232 BNIPLQ7Z465 357 aa16.49■□□□□ 0.23
BRAT1-206ENST00000493232 COLGALT2Q8IYK4 626 aa16.49■□□□□ 0.23
BRAT1-206ENST00000493232 POU5F2Q8N7G0 328 aa16.49■□□□□ 0.23
BRAT1-206ENST00000493232 PIK3R5Q8WYR1 880 aa16.49■□□□□ 0.23
BRAT1-206ENST00000493232 BSNDQ8WZ55 320 aa16.49■□□□□ 0.23
BRAT1-206ENST00000493232 MYLPFQ96A32 169 aa16.49■□□□□ 0.23
BRAT1-206ENST00000493232 MEIS2O14770 477 aa16.49■□□□□ 0.23
BRAT1-206ENST00000493232 ITGAVP06756 1048 aa16.49■□□□□ 0.23
BRAT1-206ENST00000493232 ADH1AP07327 375 aa16.49■□□□□ 0.23
BRAT1-206ENST00000493232 PFKFB4Q16877 469 aa16.49■□□□□ 0.23
BRAT1-206ENST00000493232 SNX30Q5VWJ9 437 aa16.49■□□□□ 0.23
BRAT1-206ENST00000493232 HELQQ8TDG4 1101 aa16.49■□□□□ 0.23
BRAT1-206ENST00000493232 HDHD2Q9H0R4 259 aa16.49■□□□□ 0.23
BRAT1-206ENST00000493232 MYLK2Q9H1R3 596 aa16.49■□□□□ 0.23
BRAT1-206ENST00000493232 STX11O75558 287 aa16.49■□□□□ 0.23
BRAT1-206ENST00000493232 NFKB1P19838 968 aa16.49■□□□□ 0.23
BRAT1-206ENST00000493232 PPM1AP35813 382 aa16.49■□□□□ 0.23
BRAT1-206ENST00000493232 HK2P52789 917 aa16.49■□□□□ 0.23
BRAT1-206ENST00000493232 INO80DQ53TQ3 878 aaPredicted RBP16.49■□□□□ 0.23
BRAT1-206ENST00000493232 DCLRE1AQ6PJP8 1040 aa16.49■□□□□ 0.23
BRAT1-206ENST00000493232 LRRC52Q8N7C0 313 aa16.49■□□□□ 0.23
BRAT1-206ENST00000493232 PPP3R2Q96LZ3 170 aa16.49■□□□□ 0.23
BRAT1-206ENST00000493232 SPRTNQ9H040 489 aaPredicted RBP16.49■□□□□ 0.23
BRAT1-206ENST00000493232 ZNF232Q9UNY5 417 aa16.49■□□□□ 0.23
BRAT1-206ENST00000493232 A0A0B4J269 797 aa16.48■□□□□ 0.23
BRAT1-206ENST00000493232 PNMA8CA0A1B0GUJ8 204 aa16.48■□□□□ 0.23
BRAT1-206ENST00000493232 SPATA31C2B4DYI2 1134 aa16.48■□□□□ 0.23
BRAT1-206ENST00000493232 SQLEQ14534 574 aa16.48■□□□□ 0.23
BRAT1-206ENST00000493232 HDAC7Q8WUI4 952 aa16.48■□□□□ 0.23
BRAT1-206ENST00000493232 HAS1Q92839 578 aa16.48■□□□□ 0.23
BRAT1-206ENST00000493232 TRAPPC9Q96Q05 1148 aa16.48■□□□□ 0.23
BRAT1-206ENST00000493232 CORO2BQ9UQ03 480 aa16.48■□□□□ 0.23
BRAT1-206ENST00000493232 PARNO95453 639 aaKnown RBP16.48■□□□□ 0.23
BRAT1-206ENST00000493232 AIF1P55008 147 aa16.48■□□□□ 0.23
BRAT1-206ENST00000493232 FAM180AQ6UWF9 173 aa16.48■□□□□ 0.23
BRAT1-206ENST00000493232 GRIN3AQ8TCU5 1115 aa16.48■□□□□ 0.23
BRAT1-206ENST00000493232 SHC3Q92529 594 aa16.48■□□□□ 0.23
BRAT1-206ENST00000493232 COPS5Q92905 334 aa16.48■□□□□ 0.23
BRAT1-206ENST00000493232 KAT5Q92993 513 aa16.48■□□□□ 0.23
BRAT1-206ENST00000493232 MAML3Q96JK9 1138 aa16.48■□□□□ 0.23
BRAT1-206ENST00000493232 PIPSLA2A3N6 862 aa16.48■□□□□ 0.23
BRAT1-206ENST00000493232 AP5Z1O43299 807 aa16.48■□□□□ 0.23
BRAT1-206ENST00000493232 NBNO60934 754 aa16.48■□□□□ 0.23
BRAT1-206ENST00000493232 GRM5P41594 1212 aa16.48■□□□□ 0.23
BRAT1-206ENST00000493232 CACNA2D1P54289 1103 aa16.48■□□□□ 0.23
BRAT1-206ENST00000493232 PPP1R15BQ5SWA1 713 aa16.48■□□□□ 0.23
BRAT1-206ENST00000493232 BHLHB9Q6PI77 547 aa16.48■□□□□ 0.23
BRAT1-206ENST00000493232 C11orf88Q6PI97 169 aa16.48■□□□□ 0.23
BRAT1-206ENST00000493232 PTGR2Q8N8N7 351 aaPredicted RBP16.48■□□□□ 0.23
BRAT1-206ENST00000493232 PIWIL2Q8TC59 973 aaKnown RBP16.48■□□□□ 0.23
BRAT1-206ENST00000493232 SPATA5L1Q9BVQ7 753 aa16.48■□□□□ 0.23
BRAT1-206ENST00000493232 TRIT1Q9H3H1 467 aaKnown RBP16.48■□□□□ 0.23
BRAT1-206ENST00000493232 CCDC166P0CW27 439 aa16.48■□□□□ 0.23
BRAT1-206ENST00000493232 HSPA14Q0VDF9 509 aa16.48■□□□□ 0.23
BRAT1-206ENST00000493232 PDZK1Q5T2W1 519 aa16.48■□□□□ 0.23
BRAT1-206ENST00000493232 PAGE2Q7Z2X7 111 aa16.48■□□□□ 0.23
BRAT1-206ENST00000493232 COMMD2Q86X83 199 aa16.48■□□□□ 0.23
BRAT1-206ENST00000493232 FIBCD1Q8N539 461 aa16.48■□□□□ 0.23
BRAT1-206ENST00000493232 TOP6BLQ8N6T0 577 aa16.48■□□□□ 0.23
BRAT1-206ENST00000493232 MRPS23Q9Y3D9 190 aaKnown RBP16.48■□□□□ 0.23
BRAT1-206ENST00000493232 FLT3P36888 993 aa16.47■□□□□ 0.23
BRAT1-206ENST00000493232 GPR1P46091 355 aa16.47■□□□□ 0.23
BRAT1-206ENST00000493232 CYP2R1Q6VVX0 501 aa16.47■□□□□ 0.23
BRAT1-206ENST00000493232 LRRC55Q6ZSA7 311 aa16.47■□□□□ 0.23
BRAT1-206ENST00000493232 BBS12Q6ZW61 710 aa16.47■□□□□ 0.23
BRAT1-206ENST00000493232 ZNF276Q8N554 614 aa16.47■□□□□ 0.23
BRAT1-206ENST00000493232 RDH11Q8TC12 318 aa16.47■□□□□ 0.23
BRAT1-206ENST00000493232 A8MX80 341 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms