RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 CAPNS1P04632 268 aa15.35■□□□□ 0.05
CDC42SE1-205ENST00000491825 FTH1P19P0C7X4 201 aa15.35■□□□□ 0.05
CDC42SE1-205ENST00000491825 POLR2EP19388 210 aaKnown RBP15.35■□□□□ 0.05
CDC42SE1-205ENST00000491825 EPHB2P29323 1055 aa15.35■□□□□ 0.05
CDC42SE1-205ENST00000491825 ARSEP51690 589 aa15.35■□□□□ 0.05
CDC42SE1-205ENST00000491825 PLK1P53350 603 aa15.35■□□□□ 0.05
CDC42SE1-205ENST00000491825 TPI1P60174 286 aa15.35■□□□□ 0.05
CDC42SE1-205ENST00000491825 RWDD4Q6NW29 188 aaKnown RBP15.35■□□□□ 0.05
CDC42SE1-205ENST00000491825 DBX2Q6ZNG2 339 aa15.35■□□□□ 0.05
CDC42SE1-205ENST00000491825 RFX8Q6ZV50 586 aa15.35■□□□□ 0.05
CDC42SE1-205ENST00000491825 GLRX5Q86SX6 157 aa15.35■□□□□ 0.05
CDC42SE1-205ENST00000491825 DAAM2Q86T65 1068 aa15.35■□□□□ 0.05
CDC42SE1-205ENST00000491825 RHOT1Q8IXI2 618 aa15.35■□□□□ 0.05
CDC42SE1-205ENST00000491825 RTL3Q8N8U3 475 aaKnown RBP15.35■□□□□ 0.05
CDC42SE1-205ENST00000491825 ADAMTS14Q8WXS8 1223 aa15.35■□□□□ 0.05
CDC42SE1-205ENST00000491825 ZCCHC14Q8WYQ9 949 aaKnown RBP15.35■□□□□ 0.05
CDC42SE1-205ENST00000491825 TSC1Q92574 1164 aa15.35■□□□□ 0.05
CDC42SE1-205ENST00000491825 HSPH1Q92598 858 aa15.35■□□□□ 0.05
CDC42SE1-205ENST00000491825 ZNF670Q9BS34 389 aa15.35■□□□□ 0.05
CDC42SE1-205ENST00000491825 RSPH9Q9H1X1 276 aaPredicted RBP15.35■□□□□ 0.05
CDC42SE1-205ENST00000491825 MTG2Q9H4K7 406 aa15.35■□□□□ 0.05
CDC42SE1-205ENST00000491825 GAREM1Q9H706 876 aa15.35■□□□□ 0.05
CDC42SE1-205ENST00000491825 CATSPERBQ9H7T0 1116 aa15.35■□□□□ 0.05
CDC42SE1-205ENST00000491825 DONSONQ9NYP3 566 aa15.35■□□□□ 0.05
CDC42SE1-205ENST00000491825 TRIM10Q9UDY6 481 aa15.35■□□□□ 0.05
CDC42SE1-205ENST00000491825 RALYQ9UKM9 306 aaKnown RBP15.35■□□□□ 0.05
CDC42SE1-205ENST00000491825 PPP2R2CQ9Y2T4 447 aa15.35■□□□□ 0.05
CDC42SE1-205ENST00000491825 A0A1B0GVT2 93 aa15.34■□□□□ 0.05
CDC42SE1-205ENST00000491825 ILVBLA1L0T0 632 aa15.34■□□□□ 0.05
CDC42SE1-205ENST00000491825 MACROD2A1Z1Q3 448 aa15.34■□□□□ 0.05
CDC42SE1-205ENST00000491825 GRID2IPA4D2P6 1211 aa15.34■□□□□ 0.05
CDC42SE1-205ENST00000491825 ZNF487B1APH4 448 aa15.34■□□□□ 0.05
CDC42SE1-205ENST00000491825 C10orf142B7Z368 130 aa15.34■□□□□ 0.05
CDC42SE1-205ENST00000491825 H3BRJ5 948 aa15.34■□□□□ 0.05
CDC42SE1-205ENST00000491825 SEMA4FO95754 770 aa15.34■□□□□ 0.05
CDC42SE1-205ENST00000491825 GOT1P17174 413 aa15.34■□□□□ 0.05
CDC42SE1-205ENST00000491825 OR1E1P30953 314 aa15.34■□□□□ 0.05
CDC42SE1-205ENST00000491825 ARL4AP40617 200 aa15.34■□□□□ 0.05
CDC42SE1-205ENST00000491825 CSKP41240 450 aa15.34■□□□□ 0.05
CDC42SE1-205ENST00000491825 SSR1P43307 286 aaKnown RBP15.34■□□□□ 0.05
CDC42SE1-205ENST00000491825 DPYSQ14117 519 aa15.34■□□□□ 0.05
CDC42SE1-205ENST00000491825 PDK2Q15119 407 aa15.34■□□□□ 0.05
CDC42SE1-205ENST00000491825 HLA-BQ31612 363 aa15.34■□□□□ 0.05
CDC42SE1-205ENST00000491825 HNRNPA1L2Q32P51 320 aaKnown RBP15.34■□□□□ 0.05
CDC42SE1-205ENST00000491825 PPP6R3Q5H9R7 873 aaPredicted RBP15.34■□□□□ 0.05
CDC42SE1-205ENST00000491825 IL27RAQ6UWB1 636 aa15.34■□□□□ 0.05
CDC42SE1-205ENST00000491825 TFAP2DQ7Z6R9 452 aa15.34■□□□□ 0.05
CDC42SE1-205ENST00000491825 SYCE1Q8N0S2 351 aa15.34■□□□□ 0.05
CDC42SE1-205ENST00000491825 UBE2Q2Q8WVN8 375 aa15.34■□□□□ 0.05
CDC42SE1-205ENST00000491825 BIRC7Q96CA5 298 aa15.34■□□□□ 0.05
CDC42SE1-205ENST00000491825 BTBD1Q9H0C5 482 aa15.34■□□□□ 0.05
CDC42SE1-205ENST00000491825 PCDH18Q9HCL0 1135 aa15.34■□□□□ 0.05
CDC42SE1-205ENST00000491825 TM7SF3Q9NS93 570 aa15.34■□□□□ 0.05
CDC42SE1-205ENST00000491825 CWC15Q9P013 229 aaKnown RBP15.34■□□□□ 0.05
CDC42SE1-205ENST00000491825 OR51B4Q9Y5P0 310 aa15.34■□□□□ 0.05
CDC42SE1-205ENST00000491825 PKD1L2Q7Z442 2459 aa15.34■□□□□ 0.05
CDC42SE1-205ENST00000491825 CELSR3Q9NYQ7 3312 aa15.33■□□□□ 0.05
CDC42SE1-205ENST00000491825 CXorf51AA0A1B0GTR3 108 aa15.33■□□□□ 0.04
CDC42SE1-205ENST00000491825 SRRM3A6NNA2 597 aaPredicted RBP15.33■□□□□ 0.04
CDC42SE1-205ENST00000491825 MOCS3O95396 460 aa15.33■□□□□ 0.04
CDC42SE1-205ENST00000491825 DNTTP04053 509 aa15.33■□□□□ 0.04
CDC42SE1-205ENST00000491825 ASLP04424 464 aa15.33■□□□□ 0.04
CDC42SE1-205ENST00000491825 RHOCP08134 193 aa15.33■□□□□ 0.04
CDC42SE1-205ENST00000491825 ETFBP38117 255 aa15.33■□□□□ 0.04
CDC42SE1-205ENST00000491825 GRIA4P48058 902 aa15.33■□□□□ 0.04
CDC42SE1-205ENST00000491825 CSNK1EP49674 416 aaKnown RBP15.33■□□□□ 0.04
CDC42SE1-205ENST00000491825 AFF3P51826 1226 aaKnown RBP15.33■□□□□ 0.04
CDC42SE1-205ENST00000491825 NAP1L1P55209 391 aaKnown RBP15.33■□□□□ 0.04
CDC42SE1-205ENST00000491825 CDH6P55285 790 aa15.33■□□□□ 0.04
CDC42SE1-205ENST00000491825 KIF19Q2TAC6 998 aa15.33■□□□□ 0.04
CDC42SE1-205ENST00000491825 TTC31Q49AM3 519 aaPredicted RBP15.33■□□□□ 0.04
CDC42SE1-205ENST00000491825 PITRM1Q5JRX3 1037 aa15.33■□□□□ 0.04
CDC42SE1-205ENST00000491825 ZNF776Q68DI1 518 aaPredicted RBP15.33■□□□□ 0.04
CDC42SE1-205ENST00000491825 UMODL1-AS1Q8N2C9 162 aa15.33■□□□□ 0.04
CDC42SE1-205ENST00000491825 PNPLA1Q8N8W4 532 aa15.33■□□□□ 0.04
CDC42SE1-205ENST00000491825 KDM1BQ8NB78 822 aa15.33■□□□□ 0.04
CDC42SE1-205ENST00000491825 OR52K2Q8NGK3 314 aa15.33■□□□□ 0.04
CDC42SE1-205ENST00000491825 KIAA1524Q8TCG1 905 aa15.33■□□□□ 0.04
CDC42SE1-205ENST00000491825 SNX19Q92543 992 aa15.33■□□□□ 0.04
CDC42SE1-205ENST00000491825 FAF2Q96CS3 445 aa15.33■□□□□ 0.04
CDC42SE1-205ENST00000491825 ALG14Q96F25 216 aa15.33■□□□□ 0.04
CDC42SE1-205ENST00000491825 CSPG4P5Q96PW8 444 aa15.33■□□□□ 0.04
CDC42SE1-205ENST00000491825 FEM1AQ9BSK4 669 aa15.33■□□□□ 0.04
CDC42SE1-205ENST00000491825 GOLPH3Q9H4A6 298 aa15.33■□□□□ 0.04
CDC42SE1-205ENST00000491825 SGK2Q9HBY8 427 aa15.33■□□□□ 0.04
CDC42SE1-205ENST00000491825 TM9SF3Q9HD45 589 aa15.33■□□□□ 0.04
CDC42SE1-205ENST00000491825 TOR4AQ9NXH8 423 aa15.33■□□□□ 0.04
CDC42SE1-205ENST00000491825 DDX56Q9NY93 547 aaKnown RBP15.33■□□□□ 0.04
CDC42SE1-205ENST00000491825 SERGEFQ9UGK8 458 aa15.33■□□□□ 0.04
CDC42SE1-205ENST00000491825 SUN2Q9UH99 717 aa15.33■□□□□ 0.04
CDC42SE1-205ENST00000491825 PCDHGB2Q9Y5G2 931 aa15.33■□□□□ 0.04
CDC42SE1-205ENST00000491825 CAPN6Q9Y6Q1 641 aa15.33■□□□□ 0.04
CDC42SE1-205ENST00000491825 SIN3BO75182 1162 aa15.32■□□□□ 0.04
CDC42SE1-205ENST00000491825 DKK1O94907 266 aa15.32■□□□□ 0.04
CDC42SE1-205ENST00000491825 IGHV4-34P06331 123 aa15.32■□□□□ 0.04
CDC42SE1-205ENST00000491825 CD27P26842 260 aa15.32■□□□□ 0.04
CDC42SE1-205ENST00000491825 CTNNA1P35221 906 aaKnown RBP15.32■□□□□ 0.04
CDC42SE1-205ENST00000491825 CTSOP43234 321 aaPredicted RBP15.32■□□□□ 0.04
CDC42SE1-205ENST00000491825 VASPP50552 380 aaPredicted RBP15.32■□□□□ 0.04
CDC42SE1-205ENST00000491825 GNA12Q03113 381 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms