RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 PTPRN2Q92932 1015 aa23.19■■□□□ 1.3
USF3-203ENST00000491165 NTAN1Q96AB6 310 aa23.19■■□□□ 1.3
USF3-203ENST00000491165 TASP1Q9H6P5 420 aa23.19■■□□□ 1.3
USF3-203ENST00000491165 TEX264Q9Y6I9 313 aa23.19■■□□□ 1.3
USF3-203ENST00000491165 A0A0G2JND7 137 aa23.18■■□□□ 1.3
USF3-203ENST00000491165 GREM1O60565 184 aa23.18■■□□□ 1.3
USF3-203ENST00000491165 FGF19O95750 216 aa23.18■■□□□ 1.3
USF3-203ENST00000491165 DHRS4L1P0CG22 281 aa23.18■■□□□ 1.3
USF3-203ENST00000491165 SLC7A9P82251 487 aa23.18■■□□□ 1.3
USF3-203ENST00000491165 MMRN1Q13201 1228 aa23.18■■□□□ 1.3
USF3-203ENST00000491165 TFDP2Q14188 446 aa23.18■■□□□ 1.3
USF3-203ENST00000491165 PPP2R5DQ14738 602 aa23.18■■□□□ 1.3
USF3-203ENST00000491165 BOLA3Q53S33 107 aa23.18■■□□□ 1.3
USF3-203ENST00000491165 NPAS3Q8IXF0 933 aa23.18■■□□□ 1.3
USF3-203ENST00000491165 KIRREL3Q8IZU9 778 aa23.18■■□□□ 1.3
USF3-203ENST00000491165 SMRP1Q8NCR6 262 aa23.18■■□□□ 1.3
USF3-203ENST00000491165 KCNV2Q8TDN2 545 aa23.18■■□□□ 1.3
USF3-203ENST00000491165 SERAC1Q96JX3 654 aa23.18■■□□□ 1.3
USF3-203ENST00000491165 DHX35Q9H5Z1 703 aaKnown RBP23.18■■□□□ 1.3
USF3-203ENST00000491165 SUFUQ9UMX1 484 aa23.18■■□□□ 1.3
USF3-203ENST00000491165 TRAV19A0A0A6YYK7 116 aa23.18■■□□□ 1.3
USF3-203ENST00000491165 ZNF197O14709 1029 aa23.18■■□□□ 1.3
USF3-203ENST00000491165 CHADO15335 359 aa23.18■■□□□ 1.3
USF3-203ENST00000491165 PAGE1O75459 146 aa23.18■■□□□ 1.3
USF3-203ENST00000491165 GM2AP17900 193 aa23.18■■□□□ 1.3
USF3-203ENST00000491165 IL4RP24394 825 aa23.18■■□□□ 1.3
USF3-203ENST00000491165 L1CAMP32004 1257 aa23.18■■□□□ 1.3
USF3-203ENST00000491165 SLC18A2Q05940 514 aa23.18■■□□□ 1.3
USF3-203ENST00000491165 RING1Q06587 406 aa23.18■■□□□ 1.3
USF3-203ENST00000491165 SCAPQ12770 1279 aa23.18■■□□□ 1.3
USF3-203ENST00000491165 PIK3R6Q5UE93 754 aa23.18■■□□□ 1.3
USF3-203ENST00000491165 TEKT4Q8WW24 435 aa23.18■■□□□ 1.3
USF3-203ENST00000491165 FGF13Q92913 245 aa23.18■■□□□ 1.3
USF3-203ENST00000491165 NUDCD1Q96RS6 583 aa23.18■■□□□ 1.3
USF3-203ENST00000491165 KCTD15Q96SI1 283 aaPredicted RBP23.18■■□□□ 1.3
USF3-203ENST00000491165 HBS1LQ9Y450 684 aaKnown RBP23.18■■□□□ 1.3
USF3-203ENST00000491165 NUMBLQ9Y6R0 609 aa23.18■■□□□ 1.3
USF3-203ENST00000491165 FOSL2P15408 326 aa23.17■■□□□ 1.3
USF3-203ENST00000491165 FSHRP23945 695 aa23.17■■□□□ 1.3
USF3-203ENST00000491165 ETV4P43268 484 aa23.17■■□□□ 1.3
USF3-203ENST00000491165 DPYSL2Q16555 572 aa23.17■■□□□ 1.3
USF3-203ENST00000491165 PPP6R3Q5H9R7 873 aaPredicted RBP23.17■■□□□ 1.3
USF3-203ENST00000491165 BRMS1LQ5PSV4 323 aa23.17■■□□□ 1.3
USF3-203ENST00000491165 LRRC6Q86X45 466 aa23.17■■□□□ 1.3
USF3-203ENST00000491165 ENDOVQ8N8Q3 282 aaKnown RBP23.17■■□□□ 1.3
USF3-203ENST00000491165 USP13Q92995 863 aaPredicted RBP23.17■■□□□ 1.3
USF3-203ENST00000491165 FAF2Q96CS3 445 aa23.17■■□□□ 1.3
USF3-203ENST00000491165 TUBB6Q9BUF5 446 aa23.17■■□□□ 1.3
USF3-203ENST00000491165 TRIOO75962 3097 aa23.17■■□□□ 1.3
USF3-203ENST00000491165 H7C0C1 242 aa23.17■■□□□ 1.3
USF3-203ENST00000491165 HAUS5O94927 633 aa23.17■■□□□ 1.3
USF3-203ENST00000491165 TGDSO95455 350 aa23.17■■□□□ 1.3
USF3-203ENST00000491165 ATP5OP48047 213 aa23.17■■□□□ 1.3
USF3-203ENST00000491165 ARFIP2P53365 341 aa23.17■■□□□ 1.3
USF3-203ENST00000491165 COG7P83436 770 aa23.17■■□□□ 1.3
USF3-203ENST00000491165 NADSYN1Q6IA69 706 aa23.17■■□□□ 1.3
USF3-203ENST00000491165 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.17■■□□□ 1.3
USF3-203ENST00000491165 MYEOVQ96EZ4 313 aa23.17■■□□□ 1.3
USF3-203ENST00000491165 FAM111AQ96PZ2 611 aa23.17■■□□□ 1.3
USF3-203ENST00000491165 SIK2Q9H0K1 926 aa23.17■■□□□ 1.3
USF3-203ENST00000491165 POMKQ9H5K3 350 aa23.17■■□□□ 1.3
USF3-203ENST00000491165 PCDH18Q9HCL0 1135 aa23.17■■□□□ 1.3
USF3-203ENST00000491165 HEY2Q9UBP5 337 aa23.17■■□□□ 1.3
USF3-203ENST00000491165 HS3ST4Q9Y661 456 aa23.17■■□□□ 1.3
USF3-203ENST00000491165 TPBGLP0DKB5 382 aa23.16■■□□□ 1.3
USF3-203ENST00000491165 NEFHP12036 1026 aa23.16■■□□□ 1.3
USF3-203ENST00000491165 AVPR1AP37288 418 aa23.16■■□□□ 1.3
USF3-203ENST00000491165 TAF11Q15544 211 aa23.16■■□□□ 1.3
USF3-203ENST00000491165 ARHGAP15Q53QZ3 475 aa23.16■■□□□ 1.3
USF3-203ENST00000491165 DENND1CQ8IV53 801 aa23.16■■□□□ 1.3
USF3-203ENST00000491165 ARID3BQ8IVW6 561 aaPredicted RBP23.16■■□□□ 1.3
USF3-203ENST00000491165 PAK5Q9P286 719 aa23.16■■□□□ 1.3
USF3-203ENST00000491165 MTO1Q9Y2Z2 717 aaKnown RBP23.16■■□□□ 1.3
USF3-203ENST00000491165 CCDC22O60826 627 aa23.15■■□□□ 1.3
USF3-203ENST00000491165 PYGBP11216 843 aa23.15■■□□□ 1.3
USF3-203ENST00000491165 DDX6P26196 483 aaKnown RBP eCLIP23.15■■□□□ 1.3
USF3-203ENST00000491165 CORO1AP31146 461 aaKnown RBP23.15■■□□□ 1.3
USF3-203ENST00000491165 SEMA3BQ13214 749 aa23.15■■□□□ 1.3
USF3-203ENST00000491165 PRKD1Q15139 912 aaPredicted RBP23.15■■□□□ 1.3
USF3-203ENST00000491165 ATAT1Q5SQI0 421 aa23.15■■□□□ 1.3
USF3-203ENST00000491165 CES5AQ6NT32 575 aa23.15■■□□□ 1.3
USF3-203ENST00000491165 SH2D5Q6ZV89 423 aa23.15■■□□□ 1.3
USF3-203ENST00000491165 ZSCAN18Q8TBC5 510 aaPredicted RBP23.15■■□□□ 1.3
USF3-203ENST00000491165 TTC17Q96AE7 1141 aa23.15■■□□□ 1.3
USF3-203ENST00000491165 FRMD8Q9BZ67 464 aaPredicted RBP23.15■■□□□ 1.3
USF3-203ENST00000491165 DENND2DQ9H6A0 471 aaPredicted RBP23.15■■□□□ 1.3
USF3-203ENST00000491165 DOCK4Q8N1I0 1966 aa23.15■■□□□ 1.3
USF3-203ENST00000491165 DNAJC6O75061 913 aa23.15■■□□□ 1.3
USF3-203ENST00000491165 LUC7L3O95232 432 aaKnown RBP23.15■■□□□ 1.3
USF3-203ENST00000491165 GOT1P17174 413 aa23.15■■□□□ 1.3
USF3-203ENST00000491165 CBLBQ13191 982 aa23.15■■□□□ 1.3
USF3-203ENST00000491165 MS4A13Q5J8X5 152 aa23.15■■□□□ 1.3
USF3-203ENST00000491165 SYCP2LQ5T4T6 812 aa23.15■■□□□ 1.3
USF3-203ENST00000491165 C14orf80Q86SX3 495 aa23.15■■□□□ 1.3
USF3-203ENST00000491165 SLC26A11Q86WA9 606 aa23.15■■□□□ 1.3
USF3-203ENST00000491165 LRRC3BQ96PB8 259 aa23.15■■□□□ 1.3
USF3-203ENST00000491165 RAB6BQ9NRW1 208 aa23.15■■□□□ 1.3
USF3-203ENST00000491165 OR12D3Q9UGF7 316 aa23.15■■□□□ 1.3
USF3-203ENST00000491165 ARHGAP26Q9UNA1 814 aa23.15■■□□□ 1.3
USF3-203ENST00000491165 NEU3Q9UQ49 428 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms