RNA–Protein interactions for RNA: ENST00000490667.1

SHC1-211, Transcript of SHC adaptor protein 1, humanhuman

TSL 2

Gene SHC1, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-211ENST00000490667 LATO43561 262 aa13.4□□□□□ -0.26
SHC1-211ENST00000490667 SH3BP5O60239 455 aa13.4□□□□□ -0.26
SHC1-211ENST00000490667 LRCH4O75427 683 aa13.4□□□□□ -0.26
SHC1-211ENST00000490667 ZNF883P0CG24 379 aa13.4□□□□□ -0.26
SHC1-211ENST00000490667 CD38P28907 300 aa13.4□□□□□ -0.26
SHC1-211ENST00000490667 MAT2AP31153 395 aaKnown RBP13.4□□□□□ -0.26
SHC1-211ENST00000490667 HNRNPH3P31942 346 aaKnown RBP13.4□□□□□ -0.26
SHC1-211ENST00000490667 PCK1P35558 622 aa13.4□□□□□ -0.26
SHC1-211ENST00000490667 EIF4A3P38919 411 aaKnown RBP13.4□□□□□ -0.26
SHC1-211ENST00000490667 CCNHP51946 323 aaPredicted RBP13.4□□□□□ -0.26
SHC1-211ENST00000490667 C21orf59P57076 290 aa13.4□□□□□ -0.26
SHC1-211ENST00000490667 TAS2R38P59533 333 aa13.4□□□□□ -0.26
SHC1-211ENST00000490667 SERINC3Q13530 473 aa13.4□□□□□ -0.26
SHC1-211ENST00000490667 MYLK3Q32MK0 819 aa13.4□□□□□ -0.26
SHC1-211ENST00000490667 PARP15Q460N3 678 aa13.4□□□□□ -0.26
SHC1-211ENST00000490667 SPECC1LQ69YQ0 1117 aa13.4□□□□□ -0.26
SHC1-211ENST00000490667 NEK5Q6P3R8 708 aa13.4□□□□□ -0.26
SHC1-211ENST00000490667 LAYNQ6UX15 382 aa13.4□□□□□ -0.26
SHC1-211ENST00000490667 TRIM69Q86WT6 500 aa13.4□□□□□ -0.26
SHC1-211ENST00000490667 PSTKQ8IV42 348 aaKnown RBP13.4□□□□□ -0.26
SHC1-211ENST00000490667 OR8K1Q8NGG5 319 aa13.4□□□□□ -0.26
SHC1-211ENST00000490667 CASKIN2Q8WXE0 1202 aa13.4□□□□□ -0.26
SHC1-211ENST00000490667 PPP1R16AQ96I34 528 aa13.4□□□□□ -0.26
SHC1-211ENST00000490667 SERAC1Q96JX3 654 aa13.4□□□□□ -0.26
SHC1-211ENST00000490667 KCTD15Q96SI1 283 aaPredicted RBP13.4□□□□□ -0.26
SHC1-211ENST00000490667 TM6SF2Q9BZW4 377 aa13.4□□□□□ -0.26
SHC1-211ENST00000490667 KLC2Q9H0B6 622 aa13.4□□□□□ -0.26
SHC1-211ENST00000490667 THAP2Q9H0W7 228 aa13.4□□□□□ -0.26
SHC1-211ENST00000490667 PREBQ9HCU5 417 aa13.4□□□□□ -0.26
SHC1-211ENST00000490667 TM7SF3Q9NS93 570 aa13.4□□□□□ -0.26
SHC1-211ENST00000490667 RALGAPA1Q6GYQ0 2036 aa13.4□□□□□ -0.26
SHC1-211ENST00000490667 LAMA1P25391 3075 aa13.39□□□□□ -0.27
SHC1-211ENST00000490667 DNAH14Q0VDD8 3507 aa13.39□□□□□ -0.27
SHC1-211ENST00000490667 A0A1W2PR77 199 aa13.39□□□□□ -0.27
SHC1-211ENST00000490667 RNGTTO60942 597 aaKnown RBP13.39□□□□□ -0.27
SHC1-211ENST00000490667 POP4O95707 220 aaKnown RBP13.39□□□□□ -0.27
SHC1-211ENST00000490667 GSRP00390 522 aa13.39□□□□□ -0.27
SHC1-211ENST00000490667 WNT1P04628 370 aa13.39□□□□□ -0.27
SHC1-211ENST00000490667 CYP1A2P05177 515 aa13.39□□□□□ -0.27
SHC1-211ENST00000490667 GKP32189 559 aa13.39□□□□□ -0.27
SHC1-211ENST00000490667 NUDT1P36639 197 aa13.39□□□□□ -0.27
SHC1-211ENST00000490667 CTSKP43235 329 aa13.39□□□□□ -0.27
SHC1-211ENST00000490667 HCAR3P49019 387 aa13.39□□□□□ -0.27
SHC1-211ENST00000490667 NDST2P52849 883 aa13.39□□□□□ -0.27
SHC1-211ENST00000490667 SNRPD1P62314 119 aaKnown RBP13.39□□□□□ -0.27
SHC1-211ENST00000490667 HNRNPDQ14103 355 aaKnown RBP13.39□□□□□ -0.27
SHC1-211ENST00000490667 TRIM14Q14142 442 aa13.39□□□□□ -0.27
SHC1-211ENST00000490667 PIGHQ14442 188 aaPredicted RBP13.39□□□□□ -0.27
SHC1-211ENST00000490667 SUZ12Q15022 739 aaKnown RBP13.39□□□□□ -0.27
SHC1-211ENST00000490667 BOLA3Q53S33 107 aa13.39□□□□□ -0.27
SHC1-211ENST00000490667 INO80DQ53TQ3 878 aaPredicted RBP13.39□□□□□ -0.27
SHC1-211ENST00000490667 SLC45A4Q5BKX6 768 aa13.39□□□□□ -0.27
SHC1-211ENST00000490667 PPP6R3Q5H9R7 873 aaPredicted RBP13.39□□□□□ -0.27
SHC1-211ENST00000490667 NAPEPLDQ6IQ20 393 aa13.39□□□□□ -0.27
SHC1-211ENST00000490667 RFX8Q6ZV50 586 aa13.39□□□□□ -0.27
SHC1-211ENST00000490667 CYP4V2Q6ZWL3 525 aaPredicted RBP13.39□□□□□ -0.27
SHC1-211ENST00000490667 OR2AP1Q8NGE2 309 aa13.39□□□□□ -0.27
SHC1-211ENST00000490667 LRIG1Q96JA1 1093 aa13.39□□□□□ -0.27
SHC1-211ENST00000490667 CAMK1GQ96NX5 476 aa13.39□□□□□ -0.27
SHC1-211ENST00000490667 NUP85Q9BW27 656 aa13.39□□□□□ -0.27
SHC1-211ENST00000490667 ZDHHC6Q9H6R6 413 aa13.39□□□□□ -0.27
SHC1-211ENST00000490667 LRRC19Q9H756 370 aa13.39□□□□□ -0.27
SHC1-211ENST00000490667 DMTF1Q9Y222 760 aa13.39□□□□□ -0.27
SHC1-211ENST00000490667 FNDC3AQ9Y2H6 1198 aaKnown RBP13.39□□□□□ -0.27
SHC1-211ENST00000490667 SPAARA0A1B0GVQ0 90 aa13.38□□□□□ -0.27
SHC1-211ENST00000490667 A0A1W2PQU0 124 aa13.38□□□□□ -0.27
SHC1-211ENST00000490667 H0Y8X5 98 aa13.38□□□□□ -0.27
SHC1-211ENST00000490667 KRIT1O00522 736 aa13.38□□□□□ -0.27
SHC1-211ENST00000490667 TMCC1O94876 653 aa13.38□□□□□ -0.27
SHC1-211ENST00000490667 PCDH8O95206 1070 aa13.38□□□□□ -0.27
SHC1-211ENST00000490667 ERCC2P18074 760 aa13.38□□□□□ -0.27
SHC1-211ENST00000490667 ITGB7P26010 798 aa13.38□□□□□ -0.27
SHC1-211ENST00000490667 IL1R2P27930 398 aa13.38□□□□□ -0.27
SHC1-211ENST00000490667 PMLP29590 882 aa13.38□□□□□ -0.27
SHC1-211ENST00000490667 NEK3P51956 506 aa13.38□□□□□ -0.27
SHC1-211ENST00000490667 ZNF135P52742 658 aaPredicted RBP13.38□□□□□ -0.27
SHC1-211ENST00000490667 SIM1P81133 766 aaPredicted RBP13.38□□□□□ -0.27
SHC1-211ENST00000490667 STAT4Q14765 748 aa13.38□□□□□ -0.27
SHC1-211ENST00000490667 CYTH1Q15438 398 aa13.38□□□□□ -0.27
SHC1-211ENST00000490667 ZNF423Q2M1K9 1284 aa13.38□□□□□ -0.27
SHC1-211ENST00000490667 TSR1Q2NL82 804 aaKnown RBP13.38□□□□□ -0.27
SHC1-211ENST00000490667 SETMARQ53H47 684 aaPredicted RBP13.38□□□□□ -0.27
SHC1-211ENST00000490667 ATXN7L2Q5T6C5 722 aaPredicted RBP13.38□□□□□ -0.27
SHC1-211ENST00000490667 FBXL19Q6PCT2 694 aa13.38□□□□□ -0.27
SHC1-211ENST00000490667 DBX2Q6ZNG2 339 aa13.38□□□□□ -0.27
SHC1-211ENST00000490667 VSTM4Q8IW00 320 aa13.38□□□□□ -0.27
SHC1-211ENST00000490667 NAXDQ8IW45 347 aa13.38□□□□□ -0.27
SHC1-211ENST00000490667 NETO2Q8NC67 525 aa13.38□□□□□ -0.27
SHC1-211ENST00000490667 OR6K2Q8NGY2 324 aa13.38□□□□□ -0.27
SHC1-211ENST00000490667 SETD7Q8WTS6 366 aaKnown RBP13.38□□□□□ -0.27
SHC1-211ENST00000490667 ARHGEF26Q96DR7 871 aa13.38□□□□□ -0.27
SHC1-211ENST00000490667 CELF6Q96J87 481 aaKnown RBP13.38□□□□□ -0.27
SHC1-211ENST00000490667 BTBD6Q96KE9 485 aa13.38□□□□□ -0.27
SHC1-211ENST00000490667 DNAJC7Q99615 494 aa13.38□□□□□ -0.27
SHC1-211ENST00000490667 SLC39A8Q9C0K1 460 aa13.38□□□□□ -0.27
SHC1-211ENST00000490667 ZNHIT6Q9NWK9 470 aaKnown RBP13.38□□□□□ -0.27
SHC1-211ENST00000490667 CWC15Q9P013 229 aaKnown RBP13.38□□□□□ -0.27
SHC1-211ENST00000490667 IP6K2Q9UHH9 426 aa13.38□□□□□ -0.27
SHC1-211ENST00000490667 PCDHB9Q9Y5E1 797 aa13.38□□□□□ -0.27
SHC1-211ENST00000490667 PCDHGB2Q9Y5G2 931 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms