RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 FEM1CQ96JP0 617 aa14.26□□□□□ -0.13
VARS-227ENST00000489979 IL12RB2Q99665 862 aa14.26□□□□□ -0.13
VARS-227ENST00000489979 GTPBP4Q9BZE4 634 aaKnown RBP14.26□□□□□ -0.13
VARS-227ENST00000489979 INTS2Q9H0H0 1204 aaKnown RBP14.26□□□□□ -0.13
VARS-227ENST00000489979 GDPD2Q9HCC8 539 aa14.26□□□□□ -0.13
VARS-227ENST00000489979 ASNSD1Q9NWL6 643 aa14.26□□□□□ -0.13
VARS-227ENST00000489979 SALL4Q9UJQ4 1053 aa14.26□□□□□ -0.13
VARS-227ENST00000489979 FADS3Q9Y5Q0 445 aa14.26□□□□□ -0.13
VARS-227ENST00000489979 WASF2Q9Y6W5 498 aa14.26□□□□□ -0.13
VARS-227ENST00000489979 BSNQ9UPA5 3926 aa14.25□□□□□ -0.13
VARS-227ENST00000489979 A0A0D9SEW6 157 aa14.25□□□□□ -0.13
VARS-227ENST00000489979 PSMA7O14818 248 aa14.25□□□□□ -0.13
VARS-227ENST00000489979 MUSKO15146 869 aa14.25□□□□□ -0.13
VARS-227ENST00000489979 SPINT1O43278 529 aa14.25□□□□□ -0.13
VARS-227ENST00000489979 TCEA3O75764 348 aa14.25□□□□□ -0.13
VARS-227ENST00000489979 ADRB3P13945 408 aa14.25□□□□□ -0.13
VARS-227ENST00000489979 RECQLP46063 649 aaPredicted RBP14.25□□□□□ -0.13
VARS-227ENST00000489979 CLCN6P51797 869 aa14.25□□□□□ -0.13
VARS-227ENST00000489979 CLEC14AQ86T13 490 aa14.25□□□□□ -0.13
VARS-227ENST00000489979 EXD3Q8N9H8 876 aa14.25□□□□□ -0.13
VARS-227ENST00000489979 DCAF4L2Q8NA75 395 aa14.25□□□□□ -0.13
VARS-227ENST00000489979 SMARCE1Q969G3 411 aa14.25□□□□□ -0.13
VARS-227ENST00000489979 PPP1R13BQ96KQ4 1090 aa14.25□□□□□ -0.13
VARS-227ENST00000489979 CPXM1Q96SM3 734 aa14.25□□□□□ -0.13
VARS-227ENST00000489979 UBE2TQ9NPD8 197 aaPredicted RBP14.25□□□□□ -0.13
VARS-227ENST00000489979 WDR70Q9NW82 654 aa14.25□□□□□ -0.13
VARS-227ENST00000489979 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.25□□□□□ -0.13
VARS-227ENST00000489979 SNX10Q9Y5X0 201 aa14.25□□□□□ -0.13
VARS-227ENST00000489979 AHCTF1Q8WYP5 2266 aa14.24□□□□□ -0.13
VARS-227ENST00000489979 M0QYT0 321 aa14.24□□□□□ -0.13
VARS-227ENST00000489979 RIOK3O14730 519 aaKnown RBP14.24□□□□□ -0.13
VARS-227ENST00000489979 FPGTO14772 594 aa14.24□□□□□ -0.13
VARS-227ENST00000489979 TPP1O14773 563 aa14.24□□□□□ -0.13
VARS-227ENST00000489979 EFSO43281 561 aa14.24□□□□□ -0.13
VARS-227ENST00000489979 ZNF821O75541 412 aaPredicted RBP14.24□□□□□ -0.13
VARS-227ENST00000489979 SMC2O95347 1197 aa14.24□□□□□ -0.13
VARS-227ENST00000489979 ADCY5O95622 1261 aa14.24□□□□□ -0.13
VARS-227ENST00000489979 CD44P16070 742 aaKnown RBP14.24□□□□□ -0.13
VARS-227ENST00000489979 ITGB7P26010 798 aa14.24□□□□□ -0.13
VARS-227ENST00000489979 CSRP3P50461 194 aa14.24□□□□□ -0.13
VARS-227ENST00000489979 PDX1P52945 283 aa14.24□□□□□ -0.13
VARS-227ENST00000489979 NFATC3Q12968 1075 aa14.24□□□□□ -0.13
VARS-227ENST00000489979 EIF2B5Q13144 721 aaKnown RBP14.24□□□□□ -0.13
VARS-227ENST00000489979 STIM1Q13586 685 aa14.24□□□□□ -0.13
VARS-227ENST00000489979 ISM2Q6H9L7 571 aa14.24□□□□□ -0.13
VARS-227ENST00000489979 FAM183BPQ6ZVS7 135 aa14.24□□□□□ -0.13
VARS-227ENST00000489979 SETD3Q86TU7 594 aaPredicted RBP14.24□□□□□ -0.13
VARS-227ENST00000489979 RBFAQ8N0V3 343 aa14.24□□□□□ -0.13
VARS-227ENST00000489979 FMR1NBQ8N0W7 255 aaPredicted RBP14.24□□□□□ -0.13
VARS-227ENST00000489979 WDTC1Q8N5D0 677 aa14.24□□□□□ -0.13
VARS-227ENST00000489979 OR7D4Q8NG98 312 aa14.24□□□□□ -0.13
VARS-227ENST00000489979 SPATA20Q8TB22 786 aa14.24□□□□□ -0.13
VARS-227ENST00000489979 DHTKD1Q96HY7 919 aaPredicted RBP14.24□□□□□ -0.13
VARS-227ENST00000489979 CCNL2Q96S94 520 aaPredicted RBP14.24□□□□□ -0.13
VARS-227ENST00000489979 KLF6Q99612 283 aaPredicted RBP14.24□□□□□ -0.13
VARS-227ENST00000489979 BOCQ9BWV1 1114 aa14.24□□□□□ -0.13
VARS-227ENST00000489979 TRIM4Q9C037 500 aa14.24□□□□□ -0.13
VARS-227ENST00000489979 FAM117AQ9C073 453 aa14.24□□□□□ -0.13
VARS-227ENST00000489979 TKTL2Q9H0I9 626 aa14.24□□□□□ -0.13
VARS-227ENST00000489979 TCEAL2Q9H3H9 227 aaPredicted RBP14.24□□□□□ -0.13
VARS-227ENST00000489979 ANLNQ9NQW6 1124 aa14.24□□□□□ -0.13
VARS-227ENST00000489979 HEMK1Q9Y5R4 338 aaPredicted RBP14.24□□□□□ -0.13
VARS-227ENST00000489979 BOD1L1Q8NFC6 3051 aa14.24□□□□□ -0.13
VARS-227ENST00000489979 DOCK4Q8N1I0 1966 aa14.23□□□□□ -0.13
VARS-227ENST00000489979 CCDC187A0A096LP49 1063 aa14.23□□□□□ -0.13
VARS-227ENST00000489979 IGLON5A6NGN9 336 aa14.23□□□□□ -0.13
VARS-227ENST00000489979 AP1G1O43747 822 aa14.23□□□□□ -0.13
VARS-227ENST00000489979 DAB1O75553 588 aa14.23□□□□□ -0.13
VARS-227ENST00000489979 GCATO75600 419 aa14.23□□□□□ -0.13
VARS-227ENST00000489979 L1CAMP32004 1257 aa14.23□□□□□ -0.13
VARS-227ENST00000489979 NOS2P35228 1153 aa14.23□□□□□ -0.13
VARS-227ENST00000489979 MLLT3P42568 568 aaPredicted RBP14.23□□□□□ -0.13
VARS-227ENST00000489979 RPIAP49247 311 aa14.23□□□□□ -0.13
VARS-227ENST00000489979 DNA2P51530 1060 aa14.23□□□□□ -0.13
VARS-227ENST00000489979 SGCGQ13326 291 aa14.23□□□□□ -0.13
VARS-227ENST00000489979 C1orf61Q13536 156 aa14.23□□□□□ -0.13
VARS-227ENST00000489979 OTUD1Q5VV17 481 aaPredicted RBP14.23□□□□□ -0.13
VARS-227ENST00000489979 C11orf57Q6ZUT1 292 aaPredicted RBP14.23□□□□□ -0.13
VARS-227ENST00000489979 PARS2Q7L3T8 475 aaKnown RBP14.23□□□□□ -0.13
VARS-227ENST00000489979 TFAP2DQ7Z6R9 452 aa14.23□□□□□ -0.13
VARS-227ENST00000489979 PASD1Q8IV76 773 aa14.23□□□□□ -0.13
VARS-227ENST00000489979 SLC35F3Q8IY50 421 aa14.23□□□□□ -0.13
VARS-227ENST00000489979 ZNF683Q8IZ20 524 aa14.23□□□□□ -0.13
VARS-227ENST00000489979 GLMNQ92990 594 aa14.23□□□□□ -0.13
VARS-227ENST00000489979 LENG8Q96PV6 779 aaPredicted RBP14.23□□□□□ -0.13
VARS-227ENST00000489979 CCDC3Q9BQI4 270 aa14.23□□□□□ -0.13
VARS-227ENST00000489979 HEPHQ9BQS7 1158 aa14.23□□□□□ -0.13
VARS-227ENST00000489979 SPON2Q9BUD6 331 aa14.23□□□□□ -0.13
VARS-227ENST00000489979 WDCPQ9H6R7 721 aa14.23□□□□□ -0.13
VARS-227ENST00000489979 SYNDIG1Q9H7V2 258 aa14.23□□□□□ -0.13
VARS-227ENST00000489979 PIGVQ9NUD9 493 aa14.23□□□□□ -0.13
VARS-227ENST00000489979 ARHGEF38Q9NXL2 777 aa14.23□□□□□ -0.13
VARS-227ENST00000489979 MPP6Q9NZW5 540 aa14.23□□□□□ -0.13
VARS-227ENST00000489979 SPASTQ9UBP0 616 aa14.23□□□□□ -0.13
VARS-227ENST00000489979 IL17BQ9UHF5 180 aa14.23□□□□□ -0.13
VARS-227ENST00000489979 PTPN13Q12923 2485 aa14.23□□□□□ -0.13
VARS-227ENST00000489979 DRGXA6NNA5 263 aa14.22□□□□□ -0.13
VARS-227ENST00000489979 I6L893 689 aaPredicted RBP14.22□□□□□ -0.13
VARS-227ENST00000489979 AFPP02771 609 aaKnown RBP14.22□□□□□ -0.13
VARS-227ENST00000489979 ITGA2BP08514 1039 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms