RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 ZP1P60852 638 aa5.53□□□□□ -1.52
CCDC39-206ENST00000489868 GOLGA8FQ08AF8 430 aa5.53□□□□□ -1.52
CCDC39-206ENST00000489868 Q0VFX4 171 aa5.53□□□□□ -1.52
CCDC39-206ENST00000489868 LVRNQ6Q4G3 990 aa5.53□□□□□ -1.52
CCDC39-206ENST00000489868 CYP26C1Q6V0L0 522 aa5.53□□□□□ -1.52
CCDC39-206ENST00000489868 TRILQ7L0X0 811 aa5.53□□□□□ -1.52
CCDC39-206ENST00000489868 LRRTM4Q86VH4 590 aa5.53□□□□□ -1.52
CCDC39-206ENST00000489868 ANKRD18AQ8IVF6 992 aa5.53□□□□□ -1.52
CCDC39-206ENST00000489868 USP38Q8NB14 1042 aa5.53□□□□□ -1.52
CCDC39-206ENST00000489868 ADAMTS14Q8WXS8 1223 aa5.53□□□□□ -1.52
CCDC39-206ENST00000489868 ZNF479Q96JC4 524 aa5.53□□□□□ -1.52
CCDC39-206ENST00000489868 MARK4Q96L34 752 aa5.53□□□□□ -1.52
CCDC39-206ENST00000489868 UBXN10Q96LJ8 280 aa5.53□□□□□ -1.52
CCDC39-206ENST00000489868 TMEM160Q9NX00 188 aa5.53□□□□□ -1.52
CCDC39-206ENST00000489868 GGA3Q9NZ52 723 aa5.53□□□□□ -1.52
CCDC39-206ENST00000489868 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.53□□□□□ -1.52
CCDC39-206ENST00000489868 FBXO40Q9UH90 709 aa5.53□□□□□ -1.52
CCDC39-206ENST00000489868 PCDHA7Q9UN72 937 aa5.53□□□□□ -1.52
CCDC39-206ENST00000489868 SH2D7A6NKC9 451 aaPredicted RBP5.52□□□□□ -1.53
CCDC39-206ENST00000489868 SERPINC1P01008 464 aa5.52□□□□□ -1.53
CCDC39-206ENST00000489868 MYZAPP0CAP1 466 aa5.52□□□□□ -1.53
CCDC39-206ENST00000489868 HSD3B1P14060 373 aa5.52□□□□□ -1.53
CCDC39-206ENST00000489868 PLA2G2AP14555 144 aa5.52□□□□□ -1.53
CCDC39-206ENST00000489868 RFC1P35251 1148 aaPredicted RBP5.52□□□□□ -1.53
CCDC39-206ENST00000489868 CDKN2AP42771 156 aaKnown RBP5.52□□□□□ -1.53
CCDC39-206ENST00000489868 CDH12P55289 794 aa5.52□□□□□ -1.53
CCDC39-206ENST00000489868 ROR2Q01974 943 aaKnown RBP5.52□□□□□ -1.53
CCDC39-206ENST00000489868 GHDCQ8N2G8 530 aa5.52□□□□□ -1.53
CCDC39-206ENST00000489868 GPT2Q8TD30 523 aa5.52□□□□□ -1.53
CCDC39-206ENST00000489868 RAB40AQ8WXH6 277 aa5.52□□□□□ -1.53
CCDC39-206ENST00000489868 NAF1Q96HR8 494 aaKnown RBP5.52□□□□□ -1.53
CCDC39-206ENST00000489868 ZNF333Q96JL9 665 aa5.52□□□□□ -1.53
CCDC39-206ENST00000489868 SCLT1Q96NL6 688 aa5.52□□□□□ -1.53
CCDC39-206ENST00000489868 MVB12BQ9H7P6 319 aa5.52□□□□□ -1.53
CCDC39-206ENST00000489868 PER2O15055 1255 aa5.51□□□□□ -1.53
CCDC39-206ENST00000489868 IL1AP01583 271 aa5.51□□□□□ -1.53
CCDC39-206ENST00000489868 CHRM4P08173 479 aa5.51□□□□□ -1.53
CCDC39-206ENST00000489868 CNTFP26441 200 aa5.51□□□□□ -1.53
CCDC39-206ENST00000489868 YWHAQP27348 245 aa5.51□□□□□ -1.53
CCDC39-206ENST00000489868 DCTDP32321 178 aa5.51□□□□□ -1.53
CCDC39-206ENST00000489868 ENTPD1P49961 510 aa5.51□□□□□ -1.53
CCDC39-206ENST00000489868 ARSFP54793 590 aa5.51□□□□□ -1.53
CCDC39-206ENST00000489868 UBE3AQ05086 875 aa5.51□□□□□ -1.53
CCDC39-206ENST00000489868 CHRNDQ07001 517 aa5.51□□□□□ -1.53
CCDC39-206ENST00000489868 WDR45BQ5MNZ6 344 aa5.51□□□□□ -1.53
CCDC39-206ENST00000489868 FNBP1LQ5T0N5 605 aa5.51□□□□□ -1.53
CCDC39-206ENST00000489868 ATG9BQ674R7 924 aa5.51□□□□□ -1.53
CCDC39-206ENST00000489868 ATG16L1Q676U5 607 aa5.51□□□□□ -1.53
CCDC39-206ENST00000489868 C17orf99Q6UX52 265 aa5.51□□□□□ -1.53
CCDC39-206ENST00000489868 FAM83HQ6ZRV2 1179 aaPredicted RBP5.51□□□□□ -1.53
CCDC39-206ENST00000489868 TEX45Q8NA69 505 aa5.51□□□□□ -1.53
CCDC39-206ENST00000489868 MYRIPQ8NFW9 859 aa5.51□□□□□ -1.53
CCDC39-206ENST00000489868 RASSF8Q8NHQ8 419 aa5.51□□□□□ -1.53
CCDC39-206ENST00000489868 MORC4Q8TE76 937 aa5.51□□□□□ -1.53
CCDC39-206ENST00000489868 HSPH1Q92598 858 aa5.51□□□□□ -1.53
CCDC39-206ENST00000489868 TRIM63Q969Q1 353 aa5.51□□□□□ -1.53
CCDC39-206ENST00000489868 TMEM18Q96B42 140 aa5.51□□□□□ -1.53
CCDC39-206ENST00000489868 LYZL4Q96KX0 146 aa5.51□□□□□ -1.53
CCDC39-206ENST00000489868 MSTO1Q9BUK6 570 aa5.51□□□□□ -1.53
CCDC39-206ENST00000489868 DCLK3Q9C098 648 aa5.51□□□□□ -1.53
CCDC39-206ENST00000489868 NPFFR1Q9GZQ6 430 aa5.51□□□□□ -1.53
CCDC39-206ENST00000489868 TAOK3Q9H2K8 898 aa5.51□□□□□ -1.53
CCDC39-206ENST00000489868 SLC32A1Q9H598 525 aa5.51□□□□□ -1.53
CCDC39-206ENST00000489868 EPHX3Q9H6B9 360 aa5.51□□□□□ -1.53
CCDC39-206ENST00000489868 CATSPERBQ9H7T0 1116 aa5.51□□□□□ -1.53
CCDC39-206ENST00000489868 HSF4Q9ULV5 492 aa5.51□□□□□ -1.53
CCDC39-206ENST00000489868 ADGRF5Q8IZF2 1346 aa5.5□□□□□ -1.53
CCDC39-206ENST00000489868 MS4A18H0YCH9 400 aa5.5□□□□□ -1.53
CCDC39-206ENST00000489868 LIASO43766 372 aa5.5□□□□□ -1.53
CCDC39-206ENST00000489868 SLC25A17O43808 307 aa5.5□□□□□ -1.53
CCDC39-206ENST00000489868 TSPAN3O60637 253 aa5.5□□□□□ -1.53
CCDC39-206ENST00000489868 POLBP06746 335 aa5.5□□□□□ -1.53
CCDC39-206ENST00000489868 ENO3P13929 434 aaPredicted RBP5.5□□□□□ -1.53
CCDC39-206ENST00000489868 ITGB6P18564 788 aa5.5□□□□□ -1.53
CCDC39-206ENST00000489868 CCKARP32238 428 aa5.5□□□□□ -1.53
CCDC39-206ENST00000489868 TDGQ13569 410 aa5.5□□□□□ -1.53
CCDC39-206ENST00000489868 MEPCEQ7L2J0 689 aaKnown RBP5.5□□□□□ -1.53
CCDC39-206ENST00000489868 RBFAQ8N0V3 343 aa5.5□□□□□ -1.53
CCDC39-206ENST00000489868 SLC35F5Q8WV83 523 aa5.5□□□□□ -1.53
CCDC39-206ENST00000489868 CNOT9Q92600 299 aaKnown RBP5.5□□□□□ -1.53
CCDC39-206ENST00000489868 ELP4Q96EB1 424 aa5.5□□□□□ -1.53
CCDC39-206ENST00000489868 TTYH1Q9H313 450 aaPredicted RBP5.5□□□□□ -1.53
CCDC39-206ENST00000489868 RRN3Q9NYV6 651 aa5.5□□□□□ -1.53
CCDC39-206ENST00000489868 EVPLQ92817 2033 aa5.49□□□□□ -1.53
CCDC39-206ENST00000489868 IGKV2D-30A0A075B6S6 120 aa5.49□□□□□ -1.53
CCDC39-206ENST00000489868 CLEC18AA5D8T8 446 aa5.49□□□□□ -1.53
CCDC39-206ENST00000489868 OR6C75A6NL08 312 aa5.49□□□□□ -1.53
CCDC39-206ENST00000489868 GTPBP1O00178 669 aaKnown RBP5.49□□□□□ -1.53
CCDC39-206ENST00000489868 SOX30O94993 753 aa5.49□□□□□ -1.53
CCDC39-206ENST00000489868 NGFRP08138 427 aa5.49□□□□□ -1.53
CCDC39-206ENST00000489868 CTPS1P17812 591 aa5.49□□□□□ -1.53
CCDC39-206ENST00000489868 TTKP33981 857 aa5.49□□□□□ -1.53
CCDC39-206ENST00000489868 ERV3-1Q14264 604 aa5.49□□□□□ -1.53
CCDC39-206ENST00000489868 NAA25Q14CX7 972 aa5.49□□□□□ -1.53
CCDC39-206ENST00000489868 SLC4A8Q2Y0W8 1093 aa5.49□□□□□ -1.53
CCDC39-206ENST00000489868 ZNF667Q5HYK9 610 aa5.49□□□□□ -1.53
CCDC39-206ENST00000489868 DNTTIP2Q5QJE6 756 aaKnown RBP5.49□□□□□ -1.53
CCDC39-206ENST00000489868 OTUD1Q5VV17 481 aaPredicted RBP5.49□□□□□ -1.53
CCDC39-206ENST00000489868 MON1AQ86VX9 555 aa5.49□□□□□ -1.53
CCDC39-206ENST00000489868 CLEC18CQ8NCF0 446 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms