RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 GRIA1P42261 906 aa10.17□□□□□ -0.78
USP11-211ENST00000489111 MAGEA3P43357 314 aa10.17□□□□□ -0.78
USP11-211ENST00000489111 WNT3AP56704 352 aa10.17□□□□□ -0.78
USP11-211ENST00000489111 RHOAP61586 193 aa10.17□□□□□ -0.78
USP11-211ENST00000489111 DSC2Q02487 901 aa10.17□□□□□ -0.78
USP11-211ENST00000489111 CDH17Q12864 832 aa10.17□□□□□ -0.78
USP11-211ENST00000489111 DMC1Q14565 340 aa10.17□□□□□ -0.78
USP11-211ENST00000489111 DHCR24Q15392 516 aa10.17□□□□□ -0.78
USP11-211ENST00000489111 PCSK7Q16549 785 aa10.17□□□□□ -0.78
USP11-211ENST00000489111 CTC1Q2NKJ3 1217 aa10.17□□□□□ -0.78
USP11-211ENST00000489111 EML3Q32P44 896 aa10.17□□□□□ -0.78
USP11-211ENST00000489111 KRT71Q3SY84 523 aa10.17□□□□□ -0.78
USP11-211ENST00000489111 PITRM1Q5JRX3 1037 aa10.17□□□□□ -0.78
USP11-211ENST00000489111 KCTD11Q693B1 232 aa10.17□□□□□ -0.78
USP11-211ENST00000489111 POTEHQ6S545 545 aa10.17□□□□□ -0.78
USP11-211ENST00000489111 ZNF534Q76KX8 674 aa10.17□□□□□ -0.78
USP11-211ENST00000489111 METTL3Q86U44 580 aaKnown RBP10.17□□□□□ -0.78
USP11-211ENST00000489111 IQCKQ8N0W5 287 aa10.17□□□□□ -0.78
USP11-211ENST00000489111 OR52K1Q8NGK4 314 aa10.17□□□□□ -0.78
USP11-211ENST00000489111 OR2W6PQ8NHA6 318 aa10.17□□□□□ -0.78
USP11-211ENST00000489111 ACDQ96AP0 544 aa10.17□□□□□ -0.78
USP11-211ENST00000489111 ZBTB9Q96C00 473 aa10.17□□□□□ -0.78
USP11-211ENST00000489111 STAMBPL1Q96FJ0 436 aa10.17□□□□□ -0.78
USP11-211ENST00000489111 NECTIN4Q96NY8 510 aa10.17□□□□□ -0.78
USP11-211ENST00000489111 XPO6Q96QU8 1125 aaKnown RBP10.17□□□□□ -0.78
USP11-211ENST00000489111 SEMA3CQ99985 751 aa10.17□□□□□ -0.78
USP11-211ENST00000489111 APOL2Q9BQE5 337 aa10.17□□□□□ -0.78
USP11-211ENST00000489111 MGME1Q9BQP7 344 aa10.17□□□□□ -0.78
USP11-211ENST00000489111 NAT9Q9BTE0 207 aa10.17□□□□□ -0.78
USP11-211ENST00000489111 S1PR5Q9H228 398 aa10.17□□□□□ -0.78
USP11-211ENST00000489111 EPB41L4BQ9H329 900 aa10.17□□□□□ -0.78
USP11-211ENST00000489111 MED4Q9NPJ6 270 aa10.17□□□□□ -0.78
USP11-211ENST00000489111 SLC25A13Q9UJS0 675 aa10.17□□□□□ -0.78
USP11-211ENST00000489111 SMIM23A6NLE4 172 aa10.16□□□□□ -0.78
USP11-211ENST00000489111 HOXC11O43248 304 aaPredicted RBP10.16□□□□□ -0.78
USP11-211ENST00000489111 ZMPSTE24O75844 475 aa10.16□□□□□ -0.78
USP11-211ENST00000489111 SERPINF2P08697 491 aa10.16□□□□□ -0.78
USP11-211ENST00000489111 ARSAP15289 507 aa10.16□□□□□ -0.78
USP11-211ENST00000489111 PGAM1P18669 254 aa10.16□□□□□ -0.78
USP11-211ENST00000489111 POU3F3P20264 500 aaPredicted RBP10.16□□□□□ -0.78
USP11-211ENST00000489111 CA4P22748 312 aa10.16□□□□□ -0.78
USP11-211ENST00000489111 FCARP24071 287 aa10.16□□□□□ -0.78
USP11-211ENST00000489111 MGAT1P26572 445 aa10.16□□□□□ -0.78
USP11-211ENST00000489111 STX2P32856 288 aa10.16□□□□□ -0.78
USP11-211ENST00000489111 SERPINH1P50454 418 aaKnown RBP10.16□□□□□ -0.78
USP11-211ENST00000489111 PLK1P53350 603 aa10.16□□□□□ -0.78
USP11-211ENST00000489111 ARF5P84085 180 aa10.16□□□□□ -0.78
USP11-211ENST00000489111 SULT2A1Q06520 285 aa10.16□□□□□ -0.78
USP11-211ENST00000489111 DLX2Q07687 328 aaPredicted RBP10.16□□□□□ -0.78
USP11-211ENST00000489111 ZNF844Q08AG5 666 aa10.16□□□□□ -0.78
USP11-211ENST00000489111 NIPAL4Q0D2K0 466 aa10.16□□□□□ -0.78
USP11-211ENST00000489111 NR1H3Q13133 447 aa10.16□□□□□ -0.78
USP11-211ENST00000489111 ADGRE1Q14246 886 aa10.16□□□□□ -0.78
USP11-211ENST00000489111 STAT4Q14765 748 aa10.16□□□□□ -0.78
USP11-211ENST00000489111 SLC14A2Q15849 920 aa10.16□□□□□ -0.78
USP11-211ENST00000489111 FUT11Q495W5 492 aa10.16□□□□□ -0.78
USP11-211ENST00000489111 INO80DQ53TQ3 878 aaPredicted RBP10.16□□□□□ -0.78
USP11-211ENST00000489111 TRIM68Q6AZZ1 485 aa10.16□□□□□ -0.78
USP11-211ENST00000489111 ALG1LQ6GMV1 187 aa10.16□□□□□ -0.78
USP11-211ENST00000489111 CCNJLQ8IV13 435 aa10.16□□□□□ -0.78
USP11-211ENST00000489111 KLHDC8BQ8IXV7 354 aa10.16□□□□□ -0.78
USP11-211ENST00000489111 ADGRG2Q8IZP9 1017 aa10.16□□□□□ -0.78
USP11-211ENST00000489111 APCDD1Q8J025 514 aa10.16□□□□□ -0.78
USP11-211ENST00000489111 AHI1Q8N157 1196 aa10.16□□□□□ -0.78
USP11-211ENST00000489111 PIAS4Q8N2W9 510 aaPredicted RBP10.16□□□□□ -0.78
USP11-211ENST00000489111 PGBD5Q8N414 524 aa10.16□□□□□ -0.78
USP11-211ENST00000489111 CPA6Q8N4T0 437 aa10.16□□□□□ -0.78
USP11-211ENST00000489111 ALG14Q96F25 216 aa10.16□□□□□ -0.78
USP11-211ENST00000489111 IFT43Q96FT9 208 aa10.16□□□□□ -0.78
USP11-211ENST00000489111 PKNOX2Q96KN3 472 aa10.16□□□□□ -0.78
USP11-211ENST00000489111 FAM161BQ96MY7 647 aa10.16□□□□□ -0.78
USP11-211ENST00000489111 LRRC3BQ96PB8 259 aa10.16□□□□□ -0.78
USP11-211ENST00000489111 MYADMQ96S97 322 aa10.16□□□□□ -0.78
USP11-211ENST00000489111 EBNA1BP2Q99848 306 aaKnown RBP10.16□□□□□ -0.78
USP11-211ENST00000489111 IL22Q9GZX6 179 aa10.16□□□□□ -0.78
USP11-211ENST00000489111 CENPHQ9H3R5 247 aa10.16□□□□□ -0.78
USP11-211ENST00000489111 SCUBE2Q9NQ36 999 aa10.16□□□□□ -0.78
USP11-211ENST00000489111 CASS4Q9NQ75 786 aa10.16□□□□□ -0.78
USP11-211ENST00000489111 PIH1D1Q9NWS0 290 aaKnown RBP10.16□□□□□ -0.78
USP11-211ENST00000489111 CD207Q9UJ71 328 aa10.16□□□□□ -0.78
USP11-211ENST00000489111 CLEC4EQ9ULY5 219 aa10.16□□□□□ -0.78
USP11-211ENST00000489111 TEX264Q9Y6I9 313 aa10.16□□□□□ -0.78
USP11-211ENST00000489111 CXorf51AA0A1B0GTR3 108 aa10.15□□□□□ -0.78
USP11-211ENST00000489111 EXOC1LA0A1B0GW35 172 aa10.15□□□□□ -0.78
USP11-211ENST00000489111 GOLGA8KD6RF30 607 aa10.15□□□□□ -0.78
USP11-211ENST00000489111 MUSKO15146 869 aa10.15□□□□□ -0.78
USP11-211ENST00000489111 INSIG1O15503 277 aa10.15□□□□□ -0.78
USP11-211ENST00000489111 AGTP01019 485 aa10.15□□□□□ -0.78
USP11-211ENST00000489111 SHBGP04278 402 aa10.15□□□□□ -0.78
USP11-211ENST00000489111 GSTA2P09210 222 aa10.15□□□□□ -0.78
USP11-211ENST00000489111 LAMP2P13473 410 aa10.15□□□□□ -0.78
USP11-211ENST00000489111 HLA-FP30511 346 aa10.15□□□□□ -0.78
USP11-211ENST00000489111 MAPK8P45983 427 aa10.15□□□□□ -0.78
USP11-211ENST00000489111 NPY2RP49146 381 aa10.15□□□□□ -0.78
USP11-211ENST00000489111 DGKGP49619 791 aa10.15□□□□□ -0.78
USP11-211ENST00000489111 SCNN1BP51168 640 aa10.15□□□□□ -0.78
USP11-211ENST00000489111 SKOR1P84550 965 aa10.15□□□□□ -0.78
USP11-211ENST00000489111 SLC20A2Q08357 652 aa10.15□□□□□ -0.78
USP11-211ENST00000489111 CBLBQ13191 982 aa10.15□□□□□ -0.78
USP11-211ENST00000489111 OLIG2Q13516 323 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms