RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 VPS16Q9H269 839 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 PDCL3Q9H2J4 239 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 TDRD3Q9H7E2 651 aaKnown RBP3.09□□□□□ -1.91
CALD1-221ENST00000489019 FAM204AQ9H8W3 233 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 PSTPIP2Q9H939 334 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 JMJD4Q9H9V9 463 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 NLRC4Q9NPP4 1024 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 RIC8AQ9NPQ8 531 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 A1CFQ9NQ94 594 aaKnown RBP3.09□□□□□ -1.91
CALD1-221ENST00000489019 TAB2Q9NYJ8 693 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 FLRT1Q9NZU1 646 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 NYAP2Q9P242 653 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 FNIP2Q9P278 1114 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 DDX25Q9UHL0 483 aaKnown RBP3.09□□□□□ -1.91
CALD1-221ENST00000489019 LZTS1Q9Y250 596 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 PCDHAC2Q9Y5I4 1007 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 CDY1Q9Y6F8 540 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 LRRC37AA6NMS7 1700 aa3.09□□□□□ -1.91
CALD1-221ENST00000489019 PLIN4Q96Q06 1357 aa3.09□□□□□ -1.92
CALD1-221ENST00000489019 FNDC1Q4ZHG4 1894 aaPredicted RBP3.09□□□□□ -1.92
CALD1-221ENST00000489019 KAT6AQ92794 2004 aa3.09□□□□□ -1.92
CALD1-221ENST00000489019 QSER1Q2KHR3 1735 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 FOCADQ5VW36 1801 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 ANKRD31Q8N7Z5 1873 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 CDK5RAP2Q96SN8 1893 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 IGKV6D-41A0A0C4DH26 115 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 CLRN2A0PK11 232 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 TRIM49BA6NDI0 452 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 MBD3L4A6NDZ8 208 aaPredicted RBP3.08□□□□□ -1.92
CALD1-221ENST00000489019 MBD3L3A6NE82 208 aaPredicted RBP3.08□□□□□ -1.92
CALD1-221ENST00000489019 F5H6K3 240 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 H7C4K7 107 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 AP4M1O00189 453 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 STX10O60499 249 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 ENTPD3O75355 529 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 SLU7O95391 586 aaKnown RBP3.08□□□□□ -1.92
CALD1-221ENST00000489019 ZBED1O96006 694 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 HRGP04196 525 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 NPSP0C0P6 89 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 CCDC175P0C221 793 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 SETSIPP0DME0 302 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 SNHG28P0DPA3 235 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 GCFC2P16383 781 aaKnown RBP3.08□□□□□ -1.92
CALD1-221ENST00000489019 ZNF18P17022 549 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 CCNE1P24864 410 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 FPR3P25089 353 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 CASP14P31944 242 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 EPS15P42566 896 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 NOVP48745 357 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 TPTEP56180 551 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 SNAP25P60880 206 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 RPS16P62249 146 aaKnown RBP3.08□□□□□ -1.92
CALD1-221ENST00000489019 HOXA4Q00056 320 aaPredicted RBP3.08□□□□□ -1.92
CALD1-221ENST00000489019 E2F1Q01094 437 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 KLRC3Q07444 240 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 TRAF1Q13077 416 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 HNRNPA0Q13151 305 aaKnown RBP3.08□□□□□ -1.92
CALD1-221ENST00000489019 TBX2Q13207 712 aaPredicted RBP3.08□□□□□ -1.92
CALD1-221ENST00000489019 KRT31Q15323 416 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 DLGAP5Q15398 846 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 SYCP1Q15431 976 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 KIAA0753Q2KHM9 967 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 SLC35G1Q2M3R5 365 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 QRICH1Q2TAL8 776 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 SLC44A4Q53GD3 710 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 RNASE12Q5GAN4 147 aaKnown RBP3.08□□□□□ -1.92
CALD1-221ENST00000489019 TCP11X2Q5H9J9 407 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 HAUS3Q68CZ6 603 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 NCAPH2Q6IBW4 605 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 CCDC174Q6PII3 467 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 KIRREL2Q6UWL6 708 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 UNC13DQ70J99 1090 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 ADSSL1Q8N142 457 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 PDCL2Q8N4E4 241 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 CSGALNACT2Q8N6G5 542 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 TC2NQ8N9U0 490 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 ERMNQ8TAM6 284 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 DNAJB14Q8TBM8 379 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 POF1BQ8WVV4 589 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 RAD54LQ92698 747 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 P2RX5Q93086 422 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 CCDC51Q96ER9 411 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 APIPQ96GX9 242 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 ERO1AQ96HE7 468 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 DHTKD1Q96HY7 919 aaPredicted RBP3.08□□□□□ -1.92
CALD1-221ENST00000489019 PANX2Q96RD6 677 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 TBCBQ99426 244 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 HERPUD2Q9BSE4 406 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 IDI2Q9BXS1 227 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 NT5C3AQ9H0P0 336 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 HSD3B7Q9H2F3 369 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 ZHX3Q9H4I2 956 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 THAP9Q9H5L6 903 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 VEZTQ9HBM0 779 aa3.08□□□□□ -1.92
CALD1-221ENST00000489019 TRMT13Q9NUP7 481 aaKnown RBP3.08□□□□□ -1.92
CALD1-221ENST00000489019 ZNHIT6Q9NWK9 470 aaKnown RBP3.08□□□□□ -1.92
CALD1-221ENST00000489019 CGNQ9P2M7 1197 aaKnown RBP3.08□□□□□ -1.92
CALD1-221ENST00000489019 ADD3Q9UEY8 706 aaKnown RBP3.08□□□□□ -1.92
CALD1-221ENST00000489019 LIMA1Q9UHB6 759 aaKnown RBP3.08□□□□□ -1.92
CALD1-221ENST00000489019 AFF4Q9UHB7 1163 aaKnown RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms