RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, human

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD1L-208	ENST00000488864	MMRN1	Q13201	1228 aa		13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	CUL3	Q13618	768 aa		13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	LRRC38	Q5VT99	294 aa		13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	CES4A	Q5XG92	561 aa		13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	CDHR3	Q6ZTQ4	885 aa		13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	GAREM2	Q75VX8	874 aa		13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	POLN	Q7Z5Q5	900 aa		13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	ITIH5	Q86UX2	942 aa		13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	SCUBE1	Q8IWY4	988 aa		13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	AZIN2	Q96A70	460 aa		13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	CEP295NL	Q96MC4	621 aa		13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	CYP2S1	Q96SQ9	504 aa		13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	MECR	Q9BV79	373 aa		13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	TRIM62	Q9BVG3	475 aa		13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	FAM192A	Q9GZU8	254 aa		13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	SMOC2	Q9H3U7	446 aa		13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	DHX35	Q9H5Z1	703 aa	Known RBP	13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	WDCP	Q9H6R7	721 aa		13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	IL21	Q9HBE4	155 aa		13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	TRPC7	Q9HCX4	862 aa		13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	CLIC5	Q9NZA1	410 aa		13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	AP4E1	Q9UPM8	1137 aa		13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	CHMP2B	Q9UQN3	213 aa		13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864		A0A1W2PRU2	124 aa		13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864		E7ESA3	106 aa		13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	IRAK2	O43187	625 aa		13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	MAGEC1	O60732	1142 aa		13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	FAM155B	O75949	473 aa		13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	ENDOD1	O94919	500 aa		13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	BAG2	O95816	211 aa		13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	MYL4	P12829	197 aa		13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	OTUD4	Q01804	1114 aa	Known RBP	13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	GSTA3	Q16772	222 aa		13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	TXNDC8	Q6A555	127 aa		13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	MYLK4	Q86YV6	388 aa	Predicted RBP	13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	ELMOD1	Q8N336	334 aa		13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	SLC25A41	Q8N5S1	370 aa		13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	VN1R2	Q8NFZ6	395 aa		13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	ACTL9	Q8TC94	416 aa		13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	EZH1	Q92800	747 aa	Predicted RBP	13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	TRMT2B	Q96GJ1	504 aa	Known RBP	13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	APOPT1	Q96IL0	206 aa		13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	NR1H4	Q96RI1	486 aa	Predicted RBP	13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	CYTH2	Q99418	400 aa		13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	TTC1	Q99614	292 aa		13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	ECSIT	Q9BQ95	431 aa		13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	THTPA	Q9BU02	230 aa		13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	APOL5	Q9BWW9	433 aa		13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	TKTL2	Q9H0I9	626 aa		13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	PRDM12	Q9H4Q4	367 aa		13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	COMMD8	Q9NX08	183 aa		13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	MARCH2	Q9P0N8	246 aa		13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	XPO7	Q9UIA9	1087 aa	Known RBP	13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	PPM1H	Q9ULR3	514 aa		13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	SNX10	Q9Y5X0	201 aa		13.54	□□□□□ -0.24
CHD1L-208	ENST00000488864	C3orf70	A6NLC5	250 aa	Predicted RBP	13.53	□□□□□ -0.24
CHD1L-208	ENST00000488864	COCH	O43405	550 aa		13.53	□□□□□ -0.24
CHD1L-208	ENST00000488864	IGLV3-25	P01717	112 aa		13.53	□□□□□ -0.24
CHD1L-208	ENST00000488864	F11	P03951	625 aa		13.53	□□□□□ -0.24
CHD1L-208	ENST00000488864	KDELR1	P24390	212 aa		13.53	□□□□□ -0.24
CHD1L-208	ENST00000488864	NTHL1	P78549	312 aa		13.53	□□□□□ -0.24
CHD1L-208	ENST00000488864	SLC18A2	Q05940	514 aa		13.53	□□□□□ -0.24
CHD1L-208	ENST00000488864	KDSR	Q06136	332 aa		13.53	□□□□□ -0.24
CHD1L-208	ENST00000488864	BOLA3	Q53S33	107 aa		13.53	□□□□□ -0.24
CHD1L-208	ENST00000488864	SYCP2L	Q5T4T6	812 aa		13.53	□□□□□ -0.24
CHD1L-208	ENST00000488864	STXBP5	Q5T5C0	1151 aa		13.53	□□□□□ -0.24
CHD1L-208	ENST00000488864	BEND5	Q7L4P6	421 aa		13.53	□□□□□ -0.24
CHD1L-208	ENST00000488864	NET1	Q7Z628	596 aa	Predicted RBP	13.53	□□□□□ -0.24
CHD1L-208	ENST00000488864	PCGF5	Q86SE9	256 aa		13.53	□□□□□ -0.24
CHD1L-208	ENST00000488864	TMC8	Q8IU68	726 aa		13.53	□□□□□ -0.24
CHD1L-208	ENST00000488864	TMPRSS6	Q8IU80	811 aa		13.53	□□□□□ -0.24
CHD1L-208	ENST00000488864	MRPL38	Q96DV4	380 aa	Known RBP	13.53	□□□□□ -0.24
CHD1L-208	ENST00000488864	PGAP3	Q96FM1	320 aa	Predicted RBP	13.53	□□□□□ -0.24
CHD1L-208	ENST00000488864	SLC22A12	Q96S37	553 aa		13.53	□□□□□ -0.24
CHD1L-208	ENST00000488864	RNF38	Q9H0F5	515 aa		13.53	□□□□□ -0.24
CHD1L-208	ENST00000488864	RRN3	Q9NYV6	651 aa		13.53	□□□□□ -0.24
CHD1L-208	ENST00000488864	PPARGC1A	Q9UBK2	798 aa	Known RBP	13.53	□□□□□ -0.24
CHD1L-208	ENST00000488864	ATG2A	Q2TAZ0	1938 aa		13.53	□□□□□ -0.24
CHD1L-208	ENST00000488864	CCDC195	A0A1B0GUA6	201 aa		13.53	□□□□□ -0.24
CHD1L-208	ENST00000488864	SLC12A8	A0AV02	714 aa		13.53	□□□□□ -0.24
CHD1L-208	ENST00000488864		F8W8V4	182 aa		13.53	□□□□□ -0.24
CHD1L-208	ENST00000488864	RNASEH1	O60930	286 aa	Known RBP	13.53	□□□□□ -0.24
CHD1L-208	ENST00000488864	CCR2	P41597	374 aa		13.53	□□□□□ -0.24
CHD1L-208	ENST00000488864	ELK3	P41970	407 aa		13.53	□□□□□ -0.24
CHD1L-208	ENST00000488864	KRT81	Q14533	505 aa		13.53	□□□□□ -0.24
CHD1L-208	ENST00000488864	PDCD2	Q16342	344 aa	Predicted RBP	13.53	□□□□□ -0.24
CHD1L-208	ENST00000488864	DUSP6	Q16828	381 aa		13.53	□□□□□ -0.24
CHD1L-208	ENST00000488864	HECTD3	Q5T447	861 aa		13.53	□□□□□ -0.24
CHD1L-208	ENST00000488864	FAM91A1	Q658Y4	838 aa		13.53	□□□□□ -0.24
CHD1L-208	ENST00000488864	TMC5	Q6UXY8	1006 aa		13.53	□□□□□ -0.24
CHD1L-208	ENST00000488864	UNC45B	Q8IWX7	931 aa		13.53	□□□□□ -0.24
CHD1L-208	ENST00000488864	ULK2	Q8IYT8	1036 aa		13.53	□□□□□ -0.24
CHD1L-208	ENST00000488864	PDZD8	Q8NEN9	1154 aa		13.53	□□□□□ -0.24
CHD1L-208	ENST00000488864	CMAS	Q8NFW8	434 aa	Predicted RBP	13.53	□□□□□ -0.24
CHD1L-208	ENST00000488864	SIK2	Q9H0K1	926 aa		13.53	□□□□□ -0.24
CHD1L-208	ENST00000488864	ATXN3L	Q9H3M9	355 aa		13.53	□□□□□ -0.24
CHD1L-208	ENST00000488864	OCEL1	Q9H607	264 aa		13.53	□□□□□ -0.24
CHD1L-208	ENST00000488864	SMPD4	Q9NXE4	827 aa		13.53	□□□□□ -0.24
CHD1L-208	ENST00000488864	DDX56	Q9NY93	547 aa	Known RBP	13.53	□□□□□ -0.24
CHD1L-208	ENST00000488864	UXT	Q9UBK9	157 aa	Predicted RBP	13.53	□□□□□ -0.24

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