RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 NPWQ8N729 165 aa15.32■□□□□ 0.04
CXCL12-207ENST00000488591 CHST14Q8NCH0 376 aa15.32■□□□□ 0.04
CXCL12-207ENST00000488591 OR2AP1Q8NGE2 309 aa15.32■□□□□ 0.04
CXCL12-207ENST00000488591 CEP76Q8TAP6 659 aa15.32■□□□□ 0.04
CXCL12-207ENST00000488591 GRIN3AQ8TCU5 1115 aa15.32■□□□□ 0.04
CXCL12-207ENST00000488591 LRIG1Q96JA1 1093 aa15.32■□□□□ 0.04
CXCL12-207ENST00000488591 GDAP1L1Q96MZ0 367 aa15.32■□□□□ 0.04
CXCL12-207ENST00000488591 ZNF670Q9BS34 389 aa15.32■□□□□ 0.04
CXCL12-207ENST00000488591 PARD6AQ9NPB6 346 aa15.32■□□□□ 0.04
CXCL12-207ENST00000488591 KLHL11Q9NVR0 708 aa15.32■□□□□ 0.04
CXCL12-207ENST00000488591 DDX56Q9NY93 547 aaKnown RBP15.32■□□□□ 0.04
CXCL12-207ENST00000488591 SUSD2Q9UGT4 822 aa15.32■□□□□ 0.04
CXCL12-207ENST00000488591 PILRBQ9UKJ0 227 aa15.32■□□□□ 0.04
CXCL12-207ENST00000488591 SARDHQ9UL12 918 aa15.32■□□□□ 0.04
CXCL12-207ENST00000488591 NUP205Q92621 2012 aa15.32■□□□□ 0.04
CXCL12-207ENST00000488591 PTPRZ1P23471 2315 aaPredicted RBP15.32■□□□□ 0.04
CXCL12-207ENST00000488591 LRRD1A4D1F6 860 aa15.31■□□□□ 0.04
CXCL12-207ENST00000488591 GOLGA6L3A6NEY3 463 aa15.31■□□□□ 0.04
CXCL12-207ENST00000488591 FAM47DPA6NHR8 397 aa15.31■□□□□ 0.04
CXCL12-207ENST00000488591 J3KR12 359 aa15.31■□□□□ 0.04
CXCL12-207ENST00000488591 BUB1BO60566 1050 aaPredicted RBP15.31■□□□□ 0.04
CXCL12-207ENST00000488591 LEFTY1O75610 366 aa15.31■□□□□ 0.04
CXCL12-207ENST00000488591 PALMO75781 387 aa15.31■□□□□ 0.04
CXCL12-207ENST00000488591 IGSF6O95976 241 aa15.31■□□□□ 0.04
CXCL12-207ENST00000488591 CTSLP07711 333 aa15.31■□□□□ 0.04
CXCL12-207ENST00000488591 CD48P09326 243 aa15.31■□□□□ 0.04
CXCL12-207ENST00000488591 TNNT1P13805 278 aa15.31■□□□□ 0.04
CXCL12-207ENST00000488591 COMTP21964 271 aa15.31■□□□□ 0.04
CXCL12-207ENST00000488591 TGM1P22735 817 aa15.31■□□□□ 0.04
CXCL12-207ENST00000488591 KDELR1P24390 212 aa15.31■□□□□ 0.04
CXCL12-207ENST00000488591 IL4RP24394 825 aa15.31■□□□□ 0.04
CXCL12-207ENST00000488591 LMNB2Q03252 620 aa15.31■□□□□ 0.04
CXCL12-207ENST00000488591 IL10RBQ08334 325 aa15.31■□□□□ 0.04
CXCL12-207ENST00000488591 MMRN1Q13201 1228 aa15.31■□□□□ 0.04
CXCL12-207ENST00000488591 RFTN1Q14699 578 aaPredicted RBP15.31■□□□□ 0.04
CXCL12-207ENST00000488591 MYLK3Q32MK0 819 aa15.31■□□□□ 0.04
CXCL12-207ENST00000488591 POM121L1PQ3SYA9 428 aa15.31■□□□□ 0.04
CXCL12-207ENST00000488591 DCAF12L1Q5VU92 463 aa15.31■□□□□ 0.04
CXCL12-207ENST00000488591 PRR23CQ6ZRP0 262 aa15.31■□□□□ 0.04
CXCL12-207ENST00000488591 TMEM139Q8IV31 216 aa15.31■□□□□ 0.04
CXCL12-207ENST00000488591 ARHGAP12Q8IWW6 846 aa15.31■□□□□ 0.04
CXCL12-207ENST00000488591 OR2T34Q8NGX1 318 aa15.31■□□□□ 0.04
CXCL12-207ENST00000488591 OR14C36Q8NHC7 312 aa15.31■□□□□ 0.04
CXCL12-207ENST00000488591 MAK16Q9BXY0 300 aaKnown RBP15.31■□□□□ 0.04
CXCL12-207ENST00000488591 C6orf106Q9H6K1 298 aaPredicted RBP15.31■□□□□ 0.04
CXCL12-207ENST00000488591 ZDHHC6Q9H6R6 413 aa15.31■□□□□ 0.04
CXCL12-207ENST00000488591 ETNK2Q9NVF9 386 aa15.31■□□□□ 0.04
CXCL12-207ENST00000488591 SERGEFQ9UGK8 458 aa15.31■□□□□ 0.04
CXCL12-207ENST00000488591 IPO11Q9UI26 975 aaKnown RBP15.31■□□□□ 0.04
CXCL12-207ENST00000488591 TFR2Q9UP52 801 aa15.31■□□□□ 0.04
CXCL12-207ENST00000488591 ZNF292O60281 2723 aa15.3■□□□□ 0.04
CXCL12-207ENST00000488591 TBC1D3DA0A087WVF3 549 aa15.3■□□□□ 0.04
CXCL12-207ENST00000488591 TBC1D3IA0A087WXS9 549 aa15.3■□□□□ 0.04
CXCL12-207ENST00000488591 TBC1D3EA0A087X179 549 aa15.3■□□□□ 0.04
CXCL12-207ENST00000488591 TBC1D3KA0A087X1G2 549 aa15.3■□□□□ 0.04
CXCL12-207ENST00000488591 TBC1D3FA6NER0 549 aaPredicted RBP15.3■□□□□ 0.04
CXCL12-207ENST00000488591 BTNL10A8MVZ5 291 aa15.3■□□□□ 0.04
CXCL12-207ENST00000488591 PRR5-ARHGAP8B1AHC4 643 aa15.3■□□□□ 0.04
CXCL12-207ENST00000488591 TBC1D3LB9A6J9 549 aa15.3■□□□□ 0.04
CXCL12-207ENST00000488591 KRIT1O00522 736 aa15.3■□□□□ 0.04
CXCL12-207ENST00000488591 FSBPO95073 299 aa15.3■□□□□ 0.04
CXCL12-207ENST00000488591 TBC1D3HP0C7X1 549 aa15.3■□□□□ 0.04
CXCL12-207ENST00000488591 DRD3P35462 400 aa15.3■□□□□ 0.04
CXCL12-207ENST00000488591 VAV2P52735 878 aa15.3■□□□□ 0.04
CXCL12-207ENST00000488591 ARHGAP8P85298 464 aa15.3■□□□□ 0.04
CXCL12-207ENST00000488591 CNTN1Q12860 1018 aa15.3■□□□□ 0.04
CXCL12-207ENST00000488591 DUOXA1Q1HG43 343 aa15.3■□□□□ 0.04
CXCL12-207ENST00000488591 AASDHQ4L235 1098 aaPredicted RBP15.3■□□□□ 0.04
CXCL12-207ENST00000488591 TMCO4Q5TGY1 634 aa15.3■□□□□ 0.04
CXCL12-207ENST00000488591 KIAA0895LQ68EN5 471 aa15.3■□□□□ 0.04
CXCL12-207ENST00000488591 TBC1D3GQ6DHY5 549 aa15.3■□□□□ 0.04
CXCL12-207ENST00000488591 TBC1D3CQ6IPX1 549 aa15.3■□□□□ 0.04
CXCL12-207ENST00000488591 C11orf63Q6NUN7 778 aa15.3■□□□□ 0.04
CXCL12-207ENST00000488591 DAAM2Q86T65 1068 aa15.3■□□□□ 0.04
CXCL12-207ENST00000488591 VSIG1Q86XK7 387 aa15.3■□□□□ 0.04
CXCL12-207ENST00000488591 LRRC49Q8IUZ0 686 aa15.3■□□□□ 0.04
CXCL12-207ENST00000488591 TBC1D3Q8IZP1 549 aaPredicted RBP15.3■□□□□ 0.04
CXCL12-207ENST00000488591 ATPAF2Q8N5M1 289 aa15.3■□□□□ 0.04
CXCL12-207ENST00000488591 NETO2Q8NC67 525 aa15.3■□□□□ 0.04
CXCL12-207ENST00000488591 ACRBPQ8NEB7 543 aa15.3■□□□□ 0.04
CXCL12-207ENST00000488591 PCDH19Q8TAB3 1148 aa15.3■□□□□ 0.04
CXCL12-207ENST00000488591 NSMCE1Q8WV22 266 aa15.3■□□□□ 0.04
CXCL12-207ENST00000488591 SNX19Q92543 992 aa15.3■□□□□ 0.04
CXCL12-207ENST00000488591 RAPGEF5Q92565 580 aa15.3■□□□□ 0.04
CXCL12-207ENST00000488591 ZNF599Q96NL3 588 aa15.3■□□□□ 0.04
CXCL12-207ENST00000488591 CINPQ9BW66 212 aaPredicted RBP15.3■□□□□ 0.04
CXCL12-207ENST00000488591 NUSAP1Q9BXS6 441 aaKnown RBP15.3■□□□□ 0.04
CXCL12-207ENST00000488591 OSBPL1AQ9BXW6 950 aa15.3■□□□□ 0.04
CXCL12-207ENST00000488591 MIR1-1HGQ9H1L0 117 aa15.3■□□□□ 0.04
CXCL12-207ENST00000488591 KDM4CQ9H3R0 1056 aa15.3■□□□□ 0.04
CXCL12-207ENST00000488591 GRPEL1Q9HAV7 217 aa15.3■□□□□ 0.04
CXCL12-207ENST00000488591 PDFQ9HBH1 243 aa15.3■□□□□ 0.04
CXCL12-207ENST00000488591 TMEM74BQ9NUR3 256 aa15.3■□□□□ 0.04
CXCL12-207ENST00000488591 TPX2Q9ULW0 747 aaKnown RBP15.3■□□□□ 0.04
CXCL12-207ENST00000488591 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.3■□□□□ 0.04
CXCL12-207ENST00000488591 ALG6Q9Y672 507 aa15.3■□□□□ 0.04
CXCL12-207ENST00000488591 WASF2Q9Y6W5 498 aa15.3■□□□□ 0.04
CXCL12-207ENST00000488591 USP34Q70CQ2 3546 aa15.3■□□□□ 0.04
CXCL12-207ENST00000488591 ATXN2Q99700 1313 aaKnown RBP15.29■□□□□ 0.04
CXCL12-207ENST00000488591 ZNF487B1APH4 448 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms