RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 ARNT2Q9HBZ2 717 aa9.59□□□□□ -0.87
SF3B1-211ENST00000487698 SENP1Q9P0U3 644 aa9.59□□□□□ -0.87
SF3B1-211ENST00000487698 ZNF180Q9UJW8 692 aa9.59□□□□□ -0.87
SF3B1-211ENST00000487698 SH3BP1Q9Y3L3 701 aa9.59□□□□□ -0.87
SF3B1-211ENST00000487698 OR51B4Q9Y5P0 310 aa9.59□□□□□ -0.87
SF3B1-211ENST00000487698 ZCWPW2A0A1B0GU75 182 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 FAM237BA0A1B0GVD1 139 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 E2F8A0AVK6 867 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 PER2O15055 1255 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 PMPCBO75439 489 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 USP1O94782 785 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 POLBP06746 335 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 CD86P42081 329 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 WNT3AP56704 352 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 ZNF235Q14590 738 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 FSCBQ5H9T9 825 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 SPANXN3Q5MJ09 141 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 MPP7Q5T2T1 576 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 RNF219Q5W0B1 726 aaPredicted RBP9.58□□□□□ -0.88
SF3B1-211ENST00000487698 IL31Q6EBC2 164 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 LEKR1Q6ZMV7 388 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 SLC26A11Q86WA9 606 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 UNC5BQ8IZJ1 945 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 RIN3Q8TB24 985 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 WFDC5Q8TCV5 224 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 MRRFQ96E11 262 aaKnown RBP9.58□□□□□ -0.88
SF3B1-211ENST00000487698 TMA16Q96EY4 203 aaKnown RBP9.58□□□□□ -0.88
SF3B1-211ENST00000487698 FCRL3Q96P31 734 aaPredicted RBP9.58□□□□□ -0.88
SF3B1-211ENST00000487698 PSKH2Q96QS6 385 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 MGME1Q9BQP7 344 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 KIFC1Q9BW19 673 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 PBX4Q9BYU1 374 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 POLR1EQ9GZS1 481 aaKnown RBP9.58□□□□□ -0.88
SF3B1-211ENST00000487698 SMG9Q9H0W8 520 aaKnown RBP9.58□□□□□ -0.88
SF3B1-211ENST00000487698 TASP1Q9H6P5 420 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 SAMD15Q9P1V8 674 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 DPP7Q9UHL4 492 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 SOX13Q9UN79 622 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 CCL26Q9Y258 94 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 TMEM120BA0PK00 339 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 MAGEB16A2A368 324 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 TYW5A2RUC4 315 aaKnown RBP9.58□□□□□ -0.88
SF3B1-211ENST00000487698 ZMPSTE24O75844 475 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 CD160O95971 181 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 BRAFP15056 766 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 CHN1P15882 459 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 AVPR1AP37288 418 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 GNGT1P63211 74 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 ARF5P84085 180 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 RFTN1Q14699 578 aaPredicted RBP9.58□□□□□ -0.88
SF3B1-211ENST00000487698 SLC14A2Q15849 920 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 ARHGAP15Q53QZ3 475 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 ARMC3Q5W041 872 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 TTC19Q6DKK2 380 aaPredicted RBP9.58□□□□□ -0.88
SF3B1-211ENST00000487698 MARK2Q7KZI7 788 aaKnown RBP9.58□□□□□ -0.88
SF3B1-211ENST00000487698 PPM1NQ8N819 430 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 TDRD5Q8NAT2 981 aaKnown RBP9.58□□□□□ -0.88
SF3B1-211ENST00000487698 MDM1Q8TC05 714 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 SH3RF2Q8TEC5 729 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 USP13Q92995 863 aaPredicted RBP9.58□□□□□ -0.88
SF3B1-211ENST00000487698 CENPTQ96BT3 561 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 ALG14Q96F25 216 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 ABHD8Q96I13 439 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 SELENOSQ9BQE4 189 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 SPON2Q9BUD6 331 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 FSD1LQ9BXM9 530 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 TRABDQ9H4I3 376 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 KIF9Q9HAQ2 790 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 UBA2Q9UBT2 640 aaPredicted RBP9.58□□□□□ -0.88
SF3B1-211ENST00000487698 ACTL7AQ9Y615 435 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 RPS6KL1Q9Y6S9 549 aa9.58□□□□□ -0.88
SF3B1-211ENST00000487698 MYO9BQ13459 2157 aa9.57□□□□□ -0.88
SF3B1-211ENST00000487698 SRRM3A6NNA2 597 aaPredicted RBP9.57□□□□□ -0.88
SF3B1-211ENST00000487698 H0Y626 953 aa9.57□□□□□ -0.88
SF3B1-211ENST00000487698 UGT1A9O60656 530 aa9.57□□□□□ -0.88
SF3B1-211ENST00000487698 GJB3O75712 270 aa9.57□□□□□ -0.88
SF3B1-211ENST00000487698 FAM155BO75949 473 aa9.57□□□□□ -0.88
SF3B1-211ENST00000487698 PRAMEF12O95522 483 aa9.57□□□□□ -0.88
SF3B1-211ENST00000487698 INHBAP08476 426 aa9.57□□□□□ -0.88
SF3B1-211ENST00000487698 TCF3P15923 654 aa9.57□□□□□ -0.88
SF3B1-211ENST00000487698 TPH1P17752 444 aa9.57□□□□□ -0.88
SF3B1-211ENST00000487698 KRT15P19012 456 aa9.57□□□□□ -0.88
SF3B1-211ENST00000487698 CR2P20023 1033 aa9.57□□□□□ -0.88
SF3B1-211ENST00000487698 LSP1P33241 339 aa9.57□□□□□ -0.88
SF3B1-211ENST00000487698 CHRNA4P43681 627 aa9.57□□□□□ -0.88
SF3B1-211ENST00000487698 NUMBP49757 651 aa9.57□□□□□ -0.88
SF3B1-211ENST00000487698 NTHL1P78549 312 aa9.57□□□□□ -0.88
SF3B1-211ENST00000487698 MSLNQ13421 630 aaPredicted RBP9.57□□□□□ -0.88
SF3B1-211ENST00000487698 NAB1Q13506 487 aa9.57□□□□□ -0.88
SF3B1-211ENST00000487698 MPP2Q14168 576 aa9.57□□□□□ -0.88
SF3B1-211ENST00000487698 DUSP6Q16828 381 aa9.57□□□□□ -0.88
SF3B1-211ENST00000487698 ANKRD20A4Q4UJ75 823 aa9.57□□□□□ -0.88
SF3B1-211ENST00000487698 POTEHQ6S545 545 aa9.57□□□□□ -0.88
SF3B1-211ENST00000487698 CTAGE3PQ8IX95 158 aa9.57□□□□□ -0.88
SF3B1-211ENST00000487698 CARNMT1Q8N4J0 409 aa9.57□□□□□ -0.88
SF3B1-211ENST00000487698 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.57□□□□□ -0.88
SF3B1-211ENST00000487698 ATXN2LQ8WWM7 1075 aaKnown RBP9.57□□□□□ -0.88
SF3B1-211ENST00000487698 ZNF669Q96BR6 464 aaPredicted RBP9.57□□□□□ -0.88
SF3B1-211ENST00000487698 CERS2Q96G23 380 aa9.57□□□□□ -0.88
SF3B1-211ENST00000487698 SEMA3CQ99985 751 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms