RNA–Protein interactions for RNA: ENST00000487667.5

PHF1-209, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-209ENST00000487667 GP5P40197 560 aa20.66■□□□□ 0.9
PHF1-209ENST00000487667 WNT3AP56704 352 aa20.66■□□□□ 0.9
PHF1-209ENST00000487667 SLC20A2Q08357 652 aa20.66■□□□□ 0.9
PHF1-209ENST00000487667 CERCAMQ5T4B2 595 aa20.66■□□□□ 0.9
PHF1-209ENST00000487667 ALG1LQ6GMV1 187 aa20.66■□□□□ 0.9
PHF1-209ENST00000487667 PKN3Q6P5Z2 889 aa20.66■□□□□ 0.9
PHF1-209ENST00000487667 KDELC1Q6UW63 502 aa20.66■□□□□ 0.9
PHF1-209ENST00000487667 TMC8Q8IU68 726 aa20.66■□□□□ 0.9
PHF1-209ENST00000487667 FAM217AQ8IXS0 508 aa20.66■□□□□ 0.9
PHF1-209ENST00000487667 ARL14EPQ8N8R7 260 aaPredicted RBP20.66■□□□□ 0.9
PHF1-209ENST00000487667 ZNF419Q96HQ0 510 aaPredicted RBP20.66■□□□□ 0.9
PHF1-209ENST00000487667 MRGPRX2Q96LB1 330 aa20.66■□□□□ 0.9
PHF1-209ENST00000487667 PRICKLE1Q96MT3 831 aaPredicted RBP20.66■□□□□ 0.9
PHF1-209ENST00000487667 SAMD11Q96NU1 681 aa20.66■□□□□ 0.9
PHF1-209ENST00000487667 LRRC3Q9BY71 257 aa20.66■□□□□ 0.9
PHF1-209ENST00000487667 IQCGQ9H095 443 aaKnown RBP20.66■□□□□ 0.9
PHF1-209ENST00000487667 ZMYM5Q9UJ78 669 aa20.66■□□□□ 0.9
PHF1-209ENST00000487667 CPQQ9Y646 472 aa20.66■□□□□ 0.9
PHF1-209ENST00000487667 PLXNA4Q9HCM2 1894 aa20.66■□□□□ 0.9
PHF1-209ENST00000487667 PMPCBO75439 489 aa20.66■□□□□ 0.9
PHF1-209ENST00000487667 EPOP01588 193 aa20.66■□□□□ 0.9
PHF1-209ENST00000487667 SPATA31D3P0C874 917 aa20.66■□□□□ 0.9
PHF1-209ENST00000487667 ADRA1DP25100 572 aa20.66■□□□□ 0.9
PHF1-209ENST00000487667 HOXA9P31269 272 aa20.66■□□□□ 0.9
PHF1-209ENST00000487667 ACVRL1P37023 503 aa20.66■□□□□ 0.9
PHF1-209ENST00000487667 RPS24P62847 133 aaKnown RBP20.66■□□□□ 0.9
PHF1-209ENST00000487667 GKAP1Q5VSY0 366 aaPredicted RBP20.66■□□□□ 0.9
PHF1-209ENST00000487667 ELMSAN1Q6PJG2 1045 aa20.66■□□□□ 0.9
PHF1-209ENST00000487667 Q6ZNB5 142 aa20.66■□□□□ 0.9
PHF1-209ENST00000487667 SPATA31D4Q6ZUB0 917 aa20.66■□□□□ 0.9
PHF1-209ENST00000487667 SPPL3Q8TCT6 385 aa20.66■□□□□ 0.9
PHF1-209ENST00000487667 TADA1Q96BN2 335 aa20.66■□□□□ 0.9
PHF1-209ENST00000487667 RANBP9Q96S59 729 aa20.66■□□□□ 0.9
PHF1-209ENST00000487667 KIF9Q9HAQ2 790 aa20.66■□□□□ 0.9
PHF1-209ENST00000487667 UBA2Q9UBT2 640 aaPredicted RBP20.66■□□□□ 0.9
PHF1-209ENST00000487667 CHD5Q8TDI0 1954 aa20.65■□□□□ 0.9
PHF1-209ENST00000487667 ZCWPW2A0A1B0GU75 182 aa20.65■□□□□ 0.9
PHF1-209ENST00000487667 FOXO6A8MYZ6 492 aa20.65■□□□□ 0.9
PHF1-209ENST00000487667 CKMP06732 381 aa20.65■□□□□ 0.9
PHF1-209ENST00000487667 RPA3P35244 121 aaPredicted RBP20.65■□□□□ 0.9
PHF1-209ENST00000487667 ERVFC1P60507 584 aa20.65■□□□□ 0.9
PHF1-209ENST00000487667 LRRC14Q15048 493 aa20.65■□□□□ 0.9
PHF1-209ENST00000487667 TXNDC8Q6A555 127 aa20.65■□□□□ 0.9
PHF1-209ENST00000487667 DENND5AQ6IQ26 1287 aa20.65■□□□□ 0.9
PHF1-209ENST00000487667 PACS1Q6VY07 963 aa20.65■□□□□ 0.9
PHF1-209ENST00000487667 RGS9BPQ6ZS82 235 aa20.65■□□□□ 0.9
PHF1-209ENST00000487667 HTR3DQ70Z44 454 aa20.65■□□□□ 0.9
PHF1-209ENST00000487667 NLRP9Q7RTR0 991 aa20.65■□□□□ 0.9
PHF1-209ENST00000487667 CPXM2Q8N436 756 aa20.65■□□□□ 0.9
PHF1-209ENST00000487667 POF1BQ8WVV4 589 aa20.65■□□□□ 0.9
PHF1-209ENST00000487667 MYEOVQ96EZ4 313 aa20.65■□□□□ 0.9
PHF1-209ENST00000487667 APOL2Q9BQE5 337 aa20.65■□□□□ 0.9
PHF1-209ENST00000487667 ACE2Q9BYF1 805 aaPredicted RBP20.65■□□□□ 0.9
PHF1-209ENST00000487667 ATXN3LQ9H3M9 355 aa20.65■□□□□ 0.9
PHF1-209ENST00000487667 ATP13A1Q9HD20 1204 aa20.65■□□□□ 0.9
PHF1-209ENST00000487667 PRKAG3Q9UGI9 489 aa20.65■□□□□ 0.9
PHF1-209ENST00000487667 HEATR9A2RTY3 570 aa20.65■□□□□ 0.9
PHF1-209ENST00000487667 COPEO14579 308 aa20.65■□□□□ 0.9
PHF1-209ENST00000487667 PIAS1O75925 651 aa20.65■□□□□ 0.9
PHF1-209ENST00000487667 VIMP08670 466 aaKnown RBP20.65■□□□□ 0.9
PHF1-209ENST00000487667 HOXD9P28356 352 aaPredicted RBP20.65■□□□□ 0.9
PHF1-209ENST00000487667 SPRP35270 261 aaPredicted RBP20.65■□□□□ 0.9
PHF1-209ENST00000487667 HADHAP40939 763 aa20.65■□□□□ 0.9
PHF1-209ENST00000487667 CCNFP41002 786 aa20.65■□□□□ 0.9
PHF1-209ENST00000487667 CSE1LP55060 971 aaKnown RBP20.65■□□□□ 0.9
PHF1-209ENST00000487667 ILF2Q12905 390 aaKnown RBP20.65■□□□□ 0.9
PHF1-209ENST00000487667 GAREM2Q75VX8 874 aa20.65■□□□□ 0.9
PHF1-209ENST00000487667 TMA16Q96EY4 203 aaKnown RBP20.65■□□□□ 0.9
PHF1-209ENST00000487667 PSKH2Q96QS6 385 aa20.65■□□□□ 0.9
PHF1-209ENST00000487667 SMPD4Q9NXE4 827 aa20.65■□□□□ 0.9
PHF1-209ENST00000487667 SH3BP1Q9Y3L3 701 aa20.65■□□□□ 0.9
PHF1-209ENST00000487667 TCAF1Q9Y4C2 921 aa20.65■□□□□ 0.9
PHF1-209ENST00000487667 LINC01553A4QN01 128 aa20.64■□□□□ 0.89
PHF1-209ENST00000487667 DRD4P21917 467 aa20.64■□□□□ 0.89
PHF1-209ENST00000487667 CD86P42081 329 aa20.64■□□□□ 0.89
PHF1-209ENST00000487667 CLCN4P51793 760 aa20.64■□□□□ 0.89
PHF1-209ENST00000487667 OLIG2Q13516 323 aa20.64■□□□□ 0.89
PHF1-209ENST00000487667 UGP2Q16851 508 aa20.64■□□□□ 0.89
PHF1-209ENST00000487667 MPP7Q5T2T1 576 aa20.64■□□□□ 0.89
PHF1-209ENST00000487667 PLPP4Q5VZY2 271 aa20.64■□□□□ 0.89
PHF1-209ENST00000487667 SH2D5Q6ZV89 423 aa20.64■□□□□ 0.89
PHF1-209ENST00000487667 YTHDF3Q7Z739 585 aaKnown RBP20.64■□□□□ 0.89
PHF1-209ENST00000487667 KCNMB4Q86W47 210 aa20.64■□□□□ 0.89
PHF1-209ENST00000487667 ATP2A3Q93084 1043 aa20.64■□□□□ 0.89
PHF1-209ENST00000487667 GRAMD1AQ96CP6 724 aa20.64■□□□□ 0.89
PHF1-209ENST00000487667 FCRL3Q96P31 734 aaPredicted RBP20.64■□□□□ 0.89
PHF1-209ENST00000487667 TRIM56Q9BRZ2 755 aaKnown RBP20.64■□□□□ 0.89
PHF1-209ENST00000487667 CINPQ9BW66 212 aaPredicted RBP20.64■□□□□ 0.89
PHF1-209ENST00000487667 VPS11Q9H270 941 aa20.64■□□□□ 0.89
PHF1-209ENST00000487667 ALG13Q9NP73 1137 aaKnown RBP20.64■□□□□ 0.89
PHF1-209ENST00000487667 CHRAC1Q9NRG0 131 aa20.64■□□□□ 0.89
PHF1-209ENST00000487667 PAPSS2O95340 614 aaPredicted RBP20.63■□□□□ 0.89
PHF1-209ENST00000487667 SERPINF2P08697 491 aa20.63■□□□□ 0.89
PHF1-209ENST00000487667 HNRNPA1P09651 372 aaKnown RBP eCLIP20.63■□□□□ 0.89
PHF1-209ENST00000487667 PYGBP11216 843 aa20.63■□□□□ 0.89
PHF1-209ENST00000487667 ALADP13716 330 aa20.63■□□□□ 0.89
PHF1-209ENST00000487667 HLA-DPA1P20036 260 aa20.63■□□□□ 0.89
PHF1-209ENST00000487667 SERPINH1P50454 418 aaKnown RBP20.63■□□□□ 0.89
PHF1-209ENST00000487667 EPHA5P54756 1037 aa20.63■□□□□ 0.89
PHF1-209ENST00000487667 WDR4P57081 412 aaKnown RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms