RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 PREBQ9HCU5 417 aa20.82■□□□□ 0.92
HDAC4-209ENST00000487617 TM7SF3Q9NS93 570 aa20.82■□□□□ 0.92
HDAC4-209ENST00000487617 HECAQ9UBI9 543 aaPredicted RBP20.82■□□□□ 0.92
HDAC4-209ENST00000487617 WASF2Q9Y6W5 498 aa20.82■□□□□ 0.92
HDAC4-209ENST00000487617 ZSCAN5CA6NGD5 496 aaPredicted RBP20.81■□□□□ 0.92
HDAC4-209ENST00000487617 EIF3CLB5ME19 914 aaKnown RBP20.81■□□□□ 0.92
HDAC4-209ENST00000487617 RASA4BC9J798 803 aa20.81■□□□□ 0.92
HDAC4-209ENST00000487617 EEF2KO00418 725 aaKnown RBP20.81■□□□□ 0.92
HDAC4-209ENST00000487617 VILLO15195 856 aa20.81■□□□□ 0.92
HDAC4-209ENST00000487617 RASA4O43374 803 aa20.81■□□□□ 0.92
HDAC4-209ENST00000487617 LATO43561 262 aa20.81■□□□□ 0.92
HDAC4-209ENST00000487617 ZNF883P0CG24 379 aa20.81■□□□□ 0.92
HDAC4-209ENST00000487617 PMLP29590 882 aa20.81■□□□□ 0.92
HDAC4-209ENST00000487617 TAS2R38P59533 333 aa20.81■□□□□ 0.92
HDAC4-209ENST00000487617 KCNT1Q5JUK3 1230 aa20.81■□□□□ 0.92
HDAC4-209ENST00000487617 ERN2Q76MJ5 926 aaKnown RBP20.81■□□□□ 0.92
HDAC4-209ENST00000487617 TRIM69Q86WT6 500 aa20.81■□□□□ 0.92
HDAC4-209ENST00000487617 NAXDQ8IW45 347 aa20.81■□□□□ 0.92
HDAC4-209ENST00000487617 HMCESQ96FZ2 354 aa20.81■□□□□ 0.92
HDAC4-209ENST00000487617 CAMK1GQ96NX5 476 aa20.81■□□□□ 0.92
HDAC4-209ENST00000487617 EIF3CQ99613 913 aaKnown RBP20.81■□□□□ 0.92
HDAC4-209ENST00000487617 NCAPGQ9BPX3 1015 aa20.81■□□□□ 0.92
HDAC4-209ENST00000487617 ZDHHC6Q9H6R6 413 aa20.81■□□□□ 0.92
HDAC4-209ENST00000487617 DONSONQ9NYP3 566 aa20.81■□□□□ 0.92
HDAC4-209ENST00000487617 A0A087X0T9 212 aa20.8■□□□□ 0.92
HDAC4-209ENST00000487617 SPAARA0A1B0GVQ0 90 aa20.8■□□□□ 0.92
HDAC4-209ENST00000487617 KCNK3O14649 394 aa20.8■□□□□ 0.92
HDAC4-209ENST00000487617 WNT9AO14904 365 aa20.8■□□□□ 0.92
HDAC4-209ENST00000487617 DAPK3O43293 454 aa20.8■□□□□ 0.92
HDAC4-209ENST00000487617 LRCH4O75427 683 aa20.8■□□□□ 0.92
HDAC4-209ENST00000487617 FAM228BP0C875 321 aa20.8■□□□□ 0.92
HDAC4-209ENST00000487617 CD38P28907 300 aa20.8■□□□□ 0.92
HDAC4-209ENST00000487617 CTSKP43235 329 aa20.8■□□□□ 0.92
HDAC4-209ENST00000487617 PARP15Q460N3 678 aa20.8■□□□□ 0.92
HDAC4-209ENST00000487617 NAPEPLDQ6IQ20 393 aa20.8■□□□□ 0.92
HDAC4-209ENST00000487617 PLPP6Q8IY26 295 aa20.8■□□□□ 0.92
HDAC4-209ENST00000487617 UMODL1-AS1Q8N2C9 162 aa20.8■□□□□ 0.92
HDAC4-209ENST00000487617 RNF214Q8ND24 703 aa20.8■□□□□ 0.92
HDAC4-209ENST00000487617 KCTD15Q96SI1 283 aaPredicted RBP20.8■□□□□ 0.92
HDAC4-209ENST00000487617 HDAC8Q9BY41 377 aa20.8■□□□□ 0.92
HDAC4-209ENST00000487617 KLC2Q9H0B6 622 aa20.8■□□□□ 0.92
HDAC4-209ENST00000487617 THAP2Q9H0W7 228 aa20.8■□□□□ 0.92
HDAC4-209ENST00000487617 ARHGAP20Q9P2F6 1191 aa20.8■□□□□ 0.92
HDAC4-209ENST00000487617 RNGTTO60942 597 aaKnown RBP20.79■□□□□ 0.92
HDAC4-209ENST00000487617 TMCC1O94876 653 aa20.79■□□□□ 0.92
HDAC4-209ENST00000487617 GSRP00390 522 aa20.79■□□□□ 0.92
HDAC4-209ENST00000487617 WNT1P04628 370 aa20.79■□□□□ 0.92
HDAC4-209ENST00000487617 NUDT1P36639 197 aa20.79■□□□□ 0.92
HDAC4-209ENST00000487617 SNRPD1P62314 119 aaKnown RBP20.79■□□□□ 0.92
HDAC4-209ENST00000487617 SIM1P81133 766 aaPredicted RBP20.79■□□□□ 0.92
HDAC4-209ENST00000487617 SERINC3Q13530 473 aa20.79■□□□□ 0.92
HDAC4-209ENST00000487617 HNRNPDQ14103 355 aaKnown RBP20.79■□□□□ 0.92
HDAC4-209ENST00000487617 SLC45A4Q5BKX6 768 aa20.79■□□□□ 0.92
HDAC4-209ENST00000487617 CCDC122Q5T0U0 273 aa20.79■□□□□ 0.92
HDAC4-209ENST00000487617 ALKBH5Q6P6C2 394 aaKnown RBP20.79■□□□□ 0.92
HDAC4-209ENST00000487617 OR2AP1Q8NGE2 309 aa20.79■□□□□ 0.92
HDAC4-209ENST00000487617 OR6K2Q8NGY2 324 aa20.79■□□□□ 0.92
HDAC4-209ENST00000487617 ANGPTL2Q9UKU9 493 aa20.79■□□□□ 0.92
HDAC4-209ENST00000487617 DMTF1Q9Y222 760 aa20.79■□□□□ 0.92
HDAC4-209ENST00000487617 PCDHB9Q9Y5E1 797 aa20.79■□□□□ 0.92
HDAC4-209ENST00000487617 A0A1W2PR77 199 aa20.78■□□□□ 0.92
HDAC4-209ENST00000487617 H0Y8X5 98 aa20.78■□□□□ 0.92
HDAC4-209ENST00000487617 KRIT1O00522 736 aa20.78■□□□□ 0.92
HDAC4-209ENST00000487617 PCDH8O95206 1070 aa20.78■□□□□ 0.92
HDAC4-209ENST00000487617 ITGB7P26010 798 aa20.78■□□□□ 0.92
HDAC4-209ENST00000487617 GKP32189 559 aa20.78■□□□□ 0.92
HDAC4-209ENST00000487617 PCK1P35558 622 aa20.78■□□□□ 0.92
HDAC4-209ENST00000487617 NEK3P51956 506 aa20.78■□□□□ 0.92
HDAC4-209ENST00000487617 FAM193AP78312 1265 aa20.78■□□□□ 0.92
HDAC4-209ENST00000487617 ACAP1Q15027 740 aa20.78■□□□□ 0.92
HDAC4-209ENST00000487617 SETMARQ53H47 684 aaPredicted RBP20.78■□□□□ 0.92
HDAC4-209ENST00000487617 PPP6R3Q5H9R7 873 aaPredicted RBP20.78■□□□□ 0.92
HDAC4-209ENST00000487617 ATXN7L2Q5T6C5 722 aaPredicted RBP20.78■□□□□ 0.92
HDAC4-209ENST00000487617 SPECC1LQ69YQ0 1117 aa20.78■□□□□ 0.92
HDAC4-209ENST00000487617 NEK5Q6P3R8 708 aa20.78■□□□□ 0.92
HDAC4-209ENST00000487617 RFX8Q6ZV50 586 aa20.78■□□□□ 0.92
HDAC4-209ENST00000487617 CYP4V2Q6ZWL3 525 aaPredicted RBP20.78■□□□□ 0.92
HDAC4-209ENST00000487617 PSTKQ8IV42 348 aaKnown RBP20.78■□□□□ 0.92
HDAC4-209ENST00000487617 SETD7Q8WTS6 366 aaKnown RBP20.78■□□□□ 0.92
HDAC4-209ENST00000487617 CASKIN2Q8WXE0 1202 aa20.78■□□□□ 0.92
HDAC4-209ENST00000487617 CELF6Q96J87 481 aaKnown RBP20.78■□□□□ 0.92
HDAC4-209ENST00000487617 PCDHGB2Q9Y5G2 931 aa20.78■□□□□ 0.92
HDAC4-209ENST00000487617 A0A1W2PQU0 124 aa20.77■□□□□ 0.92
HDAC4-209ENST00000487617 POP4O95707 220 aaKnown RBP20.77■□□□□ 0.92
HDAC4-209ENST00000487617 CYP1A2P05177 515 aa20.77■□□□□ 0.92
HDAC4-209ENST00000487617 HNRNPH3P31942 346 aaKnown RBP20.77■□□□□ 0.92
HDAC4-209ENST00000487617 EIF4A3P38919 411 aaKnown RBP20.77■□□□□ 0.92
HDAC4-209ENST00000487617 CCT8P50990 548 aa20.77■□□□□ 0.92
HDAC4-209ENST00000487617 NDST2P52849 883 aa20.77■□□□□ 0.92
HDAC4-209ENST00000487617 FOXC1Q12948 553 aa20.77■□□□□ 0.92
HDAC4-209ENST00000487617 TRIM14Q14142 442 aa20.77■□□□□ 0.92
HDAC4-209ENST00000487617 PIGHQ14442 188 aaPredicted RBP20.77■□□□□ 0.92
HDAC4-209ENST00000487617 SUZ12Q15022 739 aaKnown RBP20.77■□□□□ 0.92
HDAC4-209ENST00000487617 ZNF423Q2M1K9 1284 aa20.77■□□□□ 0.92
HDAC4-209ENST00000487617 MYLK3Q32MK0 819 aa20.77■□□□□ 0.92
HDAC4-209ENST00000487617 INO80DQ53TQ3 878 aaPredicted RBP20.77■□□□□ 0.92
HDAC4-209ENST00000487617 FBXL19Q6PCT2 694 aa20.77■□□□□ 0.92
HDAC4-209ENST00000487617 NETO2Q8NC67 525 aa20.77■□□□□ 0.92
HDAC4-209ENST00000487617 KLK6Q92876 244 aa20.77■□□□□ 0.92
HDAC4-209ENST00000487617 LRIG1Q96JA1 1093 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms