RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 TMEM259Q4ZIN3 620 aa12.44□□□□□ -0.42
VPS16-208ENST00000487461 FAM72AQ5TYM5 149 aa12.44□□□□□ -0.42
VPS16-208ENST00000487461 FAM72DQ6L9T8 149 aa12.44□□□□□ -0.42
VPS16-208ENST00000487461 GCNT7Q6ZNI0 430 aa12.44□□□□□ -0.42
VPS16-208ENST00000487461 FAM72BQ86X60 149 aa12.44□□□□□ -0.42
VPS16-208ENST00000487461 ZNF677Q86XU0 584 aa12.44□□□□□ -0.42
VPS16-208ENST00000487461 PCDH20Q8N6Y1 951 aaKnown RBP12.44□□□□□ -0.42
VPS16-208ENST00000487461 JOSD2Q8TAC2 188 aa12.44□□□□□ -0.42
VPS16-208ENST00000487461 LRIG1Q96JA1 1093 aa12.44□□□□□ -0.42
VPS16-208ENST00000487461 BMFQ96LC9 184 aa12.44□□□□□ -0.42
VPS16-208ENST00000487461 PCDHB18PQ96TA0 734 aa12.44□□□□□ -0.42
VPS16-208ENST00000487461 OSBPL2Q9H1P3 480 aa12.44□□□□□ -0.42
VPS16-208ENST00000487461 NLRC4Q9NPP4 1024 aa12.44□□□□□ -0.42
VPS16-208ENST00000487461 OR12D3Q9UGF7 316 aa12.44□□□□□ -0.42
VPS16-208ENST00000487461 FADS3Q9Y5Q0 445 aa12.44□□□□□ -0.42
VPS16-208ENST00000487461 HS3ST3A1Q9Y663 406 aa12.44□□□□□ -0.42
VPS16-208ENST00000487461 A0A087WV48 116 aa12.43□□□□□ -0.42
VPS16-208ENST00000487461 C2CD4BA6NLJ0 364 aa12.43□□□□□ -0.42
VPS16-208ENST00000487461 PAK4O96013 591 aaPredicted RBP12.43□□□□□ -0.42
VPS16-208ENST00000487461 ADRB3P13945 408 aa12.43□□□□□ -0.42
VPS16-208ENST00000487461 ACP1P24666 158 aa12.43□□□□□ -0.42
VPS16-208ENST00000487461 ITGB7P26010 798 aa12.43□□□□□ -0.42
VPS16-208ENST00000487461 L1CAMP32004 1257 aa12.43□□□□□ -0.42
VPS16-208ENST00000487461 GKP32189 559 aa12.43□□□□□ -0.42
VPS16-208ENST00000487461 CCNHP51946 323 aaPredicted RBP12.43□□□□□ -0.42
VPS16-208ENST00000487461 NEK3P51956 506 aa12.43□□□□□ -0.42
VPS16-208ENST00000487461 NRG1Q02297 640 aaPredicted RBP12.43□□□□□ -0.42
VPS16-208ENST00000487461 PTP4A2Q12974 167 aa12.43□□□□□ -0.42
VPS16-208ENST00000487461 MAPK8IP2Q13387 824 aaPredicted RBP12.43□□□□□ -0.42
VPS16-208ENST00000487461 ACAP1Q15027 740 aa12.43□□□□□ -0.42
VPS16-208ENST00000487461 SOWAHCQ53LP3 525 aaPredicted RBP12.43□□□□□ -0.42
VPS16-208ENST00000487461 ZNF542PQ5EBM4 170 aa12.43□□□□□ -0.42
VPS16-208ENST00000487461 MANEALQ5VSG8 457 aa12.43□□□□□ -0.42
VPS16-208ENST00000487461 CDKAL1Q5VV42 579 aa12.43□□□□□ -0.42
VPS16-208ENST00000487461 RWDD4Q6NW29 188 aaKnown RBP12.43□□□□□ -0.42
VPS16-208ENST00000487461 Q6ZSR6 202 aa12.43□□□□□ -0.42
VPS16-208ENST00000487461 ABI3BPQ7Z7G0 1075 aa12.43□□□□□ -0.42
VPS16-208ENST00000487461 NLRP14Q86W24 1093 aa12.43□□□□□ -0.42
VPS16-208ENST00000487461 PLPP6Q8IY26 295 aa12.43□□□□□ -0.42
VPS16-208ENST00000487461 SLC22A18ASQ8N1D0 253 aa12.43□□□□□ -0.42
VPS16-208ENST00000487461 GPT2Q8TD30 523 aa12.43□□□□□ -0.42
VPS16-208ENST00000487461 CENPIQ92674 756 aaPredicted RBP12.43□□□□□ -0.42
VPS16-208ENST00000487461 ARHGEF2Q92974 986 aaKnown RBP12.43□□□□□ -0.42
VPS16-208ENST00000487461 VOPP1Q96AW1 172 aa12.43□□□□□ -0.42
VPS16-208ENST00000487461 PPP1R16AQ96I34 528 aa12.43□□□□□ -0.42
VPS16-208ENST00000487461 FEM1CQ96JP0 617 aa12.43□□□□□ -0.42
VPS16-208ENST00000487461 C11orf70Q9BRQ4 267 aa12.43□□□□□ -0.42
VPS16-208ENST00000487461 CALN1Q9BXU9 219 aa12.43□□□□□ -0.42
VPS16-208ENST00000487461 SLC17A9Q9BYT1 436 aa12.43□□□□□ -0.42
VPS16-208ENST00000487461 FAM207AQ9NSI2 230 aaPredicted RBP12.43□□□□□ -0.42
VPS16-208ENST00000487461 LMBRD1Q9NUN5 540 aa12.43□□□□□ -0.42
VPS16-208ENST00000487461 HECAQ9UBI9 543 aaPredicted RBP12.43□□□□□ -0.42
VPS16-208ENST00000487461 DNAI1Q9UI46 699 aa12.43□□□□□ -0.42
VPS16-208ENST00000487461 DOCK4Q8N1I0 1966 aa12.42□□□□□ -0.42
VPS16-208ENST00000487461 POM121BA6NF01 834 aa12.42□□□□□ -0.42
VPS16-208ENST00000487461 RAD51BO15315 384 aa12.42□□□□□ -0.42
VPS16-208ENST00000487461 PIAS2O75928 621 aa12.42□□□□□ -0.42
VPS16-208ENST00000487461 PLEKP08567 350 aaPredicted RBP12.42□□□□□ -0.42
VPS16-208ENST00000487461 UNGP13051 313 aaPredicted RBP12.42□□□□□ -0.42
VPS16-208ENST00000487461 RHOQP17081 205 aa12.42□□□□□ -0.42
VPS16-208ENST00000487461 SDC4P31431 198 aa12.42□□□□□ -0.42
VPS16-208ENST00000487461 RFC1P35251 1148 aaPredicted RBP12.42□□□□□ -0.42
VPS16-208ENST00000487461 PTPN9P43378 593 aa12.42□□□□□ -0.42
VPS16-208ENST00000487461 HDAC4P56524 1084 aa12.42□□□□□ -0.42
VPS16-208ENST00000487461 RPS21P63220 83 aaKnown RBP12.42□□□□□ -0.42
VPS16-208ENST00000487461 INSM1Q01101 510 aaPredicted RBP12.42□□□□□ -0.42
VPS16-208ENST00000487461 SEMG2Q02383 582 aa12.42□□□□□ -0.42
VPS16-208ENST00000487461 RTP5Q14D33 572 aa12.42□□□□□ -0.42
VPS16-208ENST00000487461 ARL13BQ3SXY8 428 aa12.42□□□□□ -0.42
VPS16-208ENST00000487461 LEKR1Q6ZMV7 388 aa12.42□□□□□ -0.42
VPS16-208ENST00000487461 PARS2Q7L3T8 475 aaKnown RBP12.42□□□□□ -0.42
VPS16-208ENST00000487461 STRADAQ7RTN6 431 aa12.42□□□□□ -0.42
VPS16-208ENST00000487461 CACTIN-AS1Q8N1I8 211 aa12.42□□□□□ -0.42
VPS16-208ENST00000487461 CCDC185Q8N715 623 aa12.42□□□□□ -0.42
VPS16-208ENST00000487461 OR4C6Q8NH72 309 aa12.42□□□□□ -0.42
VPS16-208ENST00000487461 RFFLQ8WZ73 363 aa12.42□□□□□ -0.42
VPS16-208ENST00000487461 ISG20Q96AZ6 181 aaKnown RBP12.42□□□□□ -0.42
VPS16-208ENST00000487461 CRELD1Q96HD1 420 aa12.42□□□□□ -0.42
VPS16-208ENST00000487461 TM6SF2Q9BZW4 377 aa12.42□□□□□ -0.42
VPS16-208ENST00000487461 NRSN2Q9GZP1 204 aa12.42□□□□□ -0.42
VPS16-208ENST00000487461 ZDHHC6Q9H6R6 413 aa12.42□□□□□ -0.42
VPS16-208ENST00000487461 FANCLQ9NW38 375 aa12.42□□□□□ -0.42
VPS16-208ENST00000487461 TMEM248Q9NWD8 314 aa12.42□□□□□ -0.42
VPS16-208ENST00000487461 NEU3Q9UQ49 428 aa12.42□□□□□ -0.42
VPS16-208ENST00000487461 SIK3Q9Y2K2 1263 aa12.42□□□□□ -0.42
VPS16-208ENST00000487461 AK5Q9Y6K8 562 aa12.42□□□□□ -0.42
VPS16-208ENST00000487461 ITPR1Q14643 2758 aa12.42□□□□□ -0.42
VPS16-208ENST00000487461 FASNP49327 2511 aaKnown RBP12.42□□□□□ -0.42
VPS16-208ENST00000487461 NBEAQ8NFP9 2946 aa12.41□□□□□ -0.42
VPS16-208ENST00000487461 CXorf51AA0A1B0GTR3 108 aa12.41□□□□□ -0.42
VPS16-208ENST00000487461 IGLON5A6NGN9 336 aa12.41□□□□□ -0.42
VPS16-208ENST00000487461 C16orf96A6NNT2 1141 aa12.41□□□□□ -0.42
VPS16-208ENST00000487461 A6NNZ2 444 aa12.41□□□□□ -0.42
VPS16-208ENST00000487461 FFAR2O15552 330 aa12.41□□□□□ -0.42
VPS16-208ENST00000487461 TLX3O43711 291 aaPredicted RBP12.41□□□□□ -0.42
VPS16-208ENST00000487461 AP1G1O43747 822 aa12.41□□□□□ -0.42
VPS16-208ENST00000487461 LRIG2O94898 1065 aa12.41□□□□□ -0.42
VPS16-208ENST00000487461 KRT3P12035 628 aa12.41□□□□□ -0.42
VPS16-208ENST00000487461 MYF5P13349 255 aa12.41□□□□□ -0.42
VPS16-208ENST00000487461 ITPKBP27987 946 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms