RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 TCRBV9S1A1TA0A576 114 aa7.16□□□□□ -1.26
SF3A3-206ENST00000487062 E2F8A0AVK6 867 aa7.16□□□□□ -1.26
SF3A3-206ENST00000487062 GRXCR1A8MXD5 290 aa7.16□□□□□ -1.26
SF3A3-206ENST00000487062 KDELR3O43731 214 aa7.16□□□□□ -1.26
SF3A3-206ENST00000487062 USP12O75317 370 aa7.16□□□□□ -1.26
SF3A3-206ENST00000487062 LUC7L3O95232 432 aaKnown RBP7.16□□□□□ -1.26
SF3A3-206ENST00000487062 PEX11BO96011 259 aa7.16□□□□□ -1.26
SF3A3-206ENST00000487062 CYBBP04839 570 aa7.16□□□□□ -1.26
SF3A3-206ENST00000487062 EPCAMP16422 314 aa7.16□□□□□ -1.26
SF3A3-206ENST00000487062 CES1P23141 567 aa7.16□□□□□ -1.26
SF3A3-206ENST00000487062 PRKCHP24723 683 aa7.16□□□□□ -1.26
SF3A3-206ENST00000487062 IRS1P35568 1242 aa7.16□□□□□ -1.26
SF3A3-206ENST00000487062 ACVRL1P37023 503 aa7.16□□□□□ -1.26
SF3A3-206ENST00000487062 MDH1P40925 334 aaKnown RBP7.16□□□□□ -1.26
SF3A3-206ENST00000487062 SERPINB9P50453 376 aa7.16□□□□□ -1.26
SF3A3-206ENST00000487062 SLC10A7Q0GE19 358 aa7.16□□□□□ -1.26
SF3A3-206ENST00000487062 RAB30Q15771 203 aa7.16□□□□□ -1.26
SF3A3-206ENST00000487062 SLC14A2Q15849 920 aa7.16□□□□□ -1.26
SF3A3-206ENST00000487062 KBTBD12Q3ZCT8 623 aa7.16□□□□□ -1.26
SF3A3-206ENST00000487062 FAM182AQ5T1J6 154 aa7.16□□□□□ -1.26
SF3A3-206ENST00000487062 MPP7Q5T2T1 576 aa7.16□□□□□ -1.26
SF3A3-206ENST00000487062 RNF219Q5W0B1 726 aaPredicted RBP7.16□□□□□ -1.26
SF3A3-206ENST00000487062 ZNF449Q6P9G9 518 aa7.16□□□□□ -1.26
SF3A3-206ENST00000487062 UNC5AQ6ZN44 842 aa7.16□□□□□ -1.26
SF3A3-206ENST00000487062 OTOP3Q7RTS5 596 aa7.16□□□□□ -1.26
SF3A3-206ENST00000487062 EXOC3L1Q86VI1 746 aa7.16□□□□□ -1.26
SF3A3-206ENST00000487062 SLC26A11Q86WA9 606 aa7.16□□□□□ -1.26
SF3A3-206ENST00000487062 LRRC6Q86X45 466 aa7.16□□□□□ -1.26
SF3A3-206ENST00000487062 CTAGE3PQ8IX95 158 aa7.16□□□□□ -1.26
SF3A3-206ENST00000487062 FAM217AQ8IXS0 508 aa7.16□□□□□ -1.26
SF3A3-206ENST00000487062 CMTM8Q8IZV2 173 aa7.16□□□□□ -1.26
SF3A3-206ENST00000487062 CARNMT1Q8N4J0 409 aa7.16□□□□□ -1.26
SF3A3-206ENST00000487062 IPMKQ8NFU5 416 aa7.16□□□□□ -1.26
SF3A3-206ENST00000487062 PPP2R3CQ969Q6 453 aa7.16□□□□□ -1.26
SF3A3-206ENST00000487062 WBP2Q969T9 261 aa7.16□□□□□ -1.26
SF3A3-206ENST00000487062 TTC17Q96AE7 1141 aa7.16□□□□□ -1.26
SF3A3-206ENST00000487062 MYEOVQ96EZ4 313 aa7.16□□□□□ -1.26
SF3A3-206ENST00000487062 OXNAD1Q96HP4 312 aaPredicted RBP7.16□□□□□ -1.26
SF3A3-206ENST00000487062 PRICKLE1Q96MT3 831 aaPredicted RBP7.16□□□□□ -1.26
SF3A3-206ENST00000487062 GORASP1Q9BQQ3 440 aa7.16□□□□□ -1.26
SF3A3-206ENST00000487062 WDR83Q9BRX9 315 aaKnown RBP7.16□□□□□ -1.26
SF3A3-206ENST00000487062 SPON2Q9BUD6 331 aa7.16□□□□□ -1.26
SF3A3-206ENST00000487062 FICDQ9BVA6 458 aa7.16□□□□□ -1.26
SF3A3-206ENST00000487062 PRKD2Q9BZL6 878 aa7.16□□□□□ -1.26
SF3A3-206ENST00000487062 MUC3BQ9H195 1237 aa7.16□□□□□ -1.26
SF3A3-206ENST00000487062 PIDD1Q9HB75 910 aa7.16□□□□□ -1.26
SF3A3-206ENST00000487062 SYBUQ9NX95 663 aa7.16□□□□□ -1.26
SF3A3-206ENST00000487062 EURLQ9NYK6 297 aa7.16□□□□□ -1.26
SF3A3-206ENST00000487062 UBP1Q9NZI7 540 aa7.16□□□□□ -1.26
SF3A3-206ENST00000487062 CFAP97Q9P2B7 532 aa7.16□□□□□ -1.26
SF3A3-206ENST00000487062 DNMT3BQ9UBC3 853 aaKnown RBP7.16□□□□□ -1.26
SF3A3-206ENST00000487062 UBA2Q9UBT2 640 aaPredicted RBP7.16□□□□□ -1.26
SF3A3-206ENST00000487062 CTNNAL1Q9UBT7 734 aa7.16□□□□□ -1.26
SF3A3-206ENST00000487062 SEPT3Q9UH03 358 aa7.16□□□□□ -1.26
SF3A3-206ENST00000487062 ZNF180Q9UJW8 692 aa7.16□□□□□ -1.26
SF3A3-206ENST00000487062 ARHGAP26Q9UNA1 814 aa7.16□□□□□ -1.26
SF3A3-206ENST00000487062 LHX6Q9UPM6 363 aa7.16□□□□□ -1.26
SF3A3-206ENST00000487062 ATG2AQ2TAZ0 1938 aa7.15□□□□□ -1.26
SF3A3-206ENST00000487062 FAM237BA0A1B0GVD1 139 aa7.15□□□□□ -1.26
SF3A3-206ENST00000487062 FAM159BA6NKW6 160 aa7.15□□□□□ -1.26
SF3A3-206ENST00000487062 LEFTY2O00292 366 aa7.15□□□□□ -1.26
SF3A3-206ENST00000487062 GREM1O60565 184 aa7.15□□□□□ -1.26
SF3A3-206ENST00000487062 SHOX2O60902 331 aaPredicted RBP7.15□□□□□ -1.26
SF3A3-206ENST00000487062 PMPCBO75439 489 aa7.15□□□□□ -1.26
SF3A3-206ENST00000487062 RFPL2O75678 378 aa7.15□□□□□ -1.26
SF3A3-206ENST00000487062 KRT37O76014 449 aa7.15□□□□□ -1.26
SF3A3-206ENST00000487062 KRT38O76015 456 aa7.15□□□□□ -1.26
SF3A3-206ENST00000487062 USP1O94782 785 aa7.15□□□□□ -1.26
SF3A3-206ENST00000487062 ALDH1A2O94788 518 aa7.15□□□□□ -1.26
SF3A3-206ENST00000487062 ARHGEF15O94989 841 aa7.15□□□□□ -1.26
SF3A3-206ENST00000487062 MT-CYBP00156 380 aaPredicted RBP7.15□□□□□ -1.26
SF3A3-206ENST00000487062 RHOP08100 348 aa7.15□□□□□ -1.26
SF3A3-206ENST00000487062 BRAFP15056 766 aa7.15□□□□□ -1.26
SF3A3-206ENST00000487062 GJA1P17302 382 aa7.15□□□□□ -1.26
SF3A3-206ENST00000487062 CNTFP26441 200 aa7.15□□□□□ -1.26
SF3A3-206ENST00000487062 HOXD9P28356 352 aaPredicted RBP7.15□□□□□ -1.26
SF3A3-206ENST00000487062 GCAP28676 217 aa7.15□□□□□ -1.26
SF3A3-206ENST00000487062 CD86P42081 329 aa7.15□□□□□ -1.26
SF3A3-206ENST00000487062 SGSHP51688 502 aa7.15□□□□□ -1.26
SF3A3-206ENST00000487062 WNT3AP56704 352 aa7.15□□□□□ -1.26
SF3A3-206ENST00000487062 GNGT1P63211 74 aa7.15□□□□□ -1.26
SF3A3-206ENST00000487062 MGAT5Q09328 741 aa7.15□□□□□ -1.26
SF3A3-206ENST00000487062 SLC12A1Q13621 1099 aa7.15□□□□□ -1.26
SF3A3-206ENST00000487062 CDH18Q13634 790 aa7.15□□□□□ -1.26
SF3A3-206ENST00000487062 LAMB3Q13751 1172 aa7.15□□□□□ -1.26
SF3A3-206ENST00000487062 CAMK1Q14012 370 aa7.15□□□□□ -1.26
SF3A3-206ENST00000487062 FRG1Q14331 258 aaKnown RBP7.15□□□□□ -1.26
SF3A3-206ENST00000487062 CRYMQ14894 314 aa7.15□□□□□ -1.26
SF3A3-206ENST00000487062 TEAD2Q15562 447 aa7.15□□□□□ -1.26
SF3A3-206ENST00000487062 PCID2Q5JVF3 399 aa7.15□□□□□ -1.26
SF3A3-206ENST00000487062 FAM109BQ6ICB4 259 aaPredicted RBP7.15□□□□□ -1.26
SF3A3-206ENST00000487062 KDELC1Q6UW63 502 aa7.15□□□□□ -1.26
SF3A3-206ENST00000487062 MARK2Q7KZI7 788 aaKnown RBP7.15□□□□□ -1.26
SF3A3-206ENST00000487062 TRABD2AQ86V40 505 aa7.15□□□□□ -1.26
SF3A3-206ENST00000487062 MFN1Q8IWA4 741 aa7.15□□□□□ -1.26
SF3A3-206ENST00000487062 SRRM1Q8IYB3 904 aaKnown RBP7.15□□□□□ -1.26
SF3A3-206ENST00000487062 AGGF1Q8N302 714 aaeCLIP7.15□□□□□ -1.26
SF3A3-206ENST00000487062 MPP5Q8N3R9 675 aa7.15□□□□□ -1.26
SF3A3-206ENST00000487062 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.15□□□□□ -1.26
SF3A3-206ENST00000487062 PPM1NQ8N819 430 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms