RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 MON1AQ86VX9 555 aa4.34□□□□□ -1.71
PTCD3-216ENST00000487043 SCN4BQ8IWT1 228 aa4.34□□□□□ -1.71
PTCD3-216ENST00000487043 TMTC2Q8N394 836 aa4.34□□□□□ -1.71
PTCD3-216ENST00000487043 LCORLQ8N3X6 602 aa4.34□□□□□ -1.71
PTCD3-216ENST00000487043 ENDOVQ8N8Q3 282 aaKnown RBP4.34□□□□□ -1.71
PTCD3-216ENST00000487043 BEND2Q8NDZ0 799 aa4.34□□□□□ -1.71
PTCD3-216ENST00000487043 TNIP2Q8NFZ5 429 aa4.34□□□□□ -1.71
PTCD3-216ENST00000487043 HAS1Q92839 578 aa4.34□□□□□ -1.71
PTCD3-216ENST00000487043 SH3KBP1Q96B97 665 aa4.34□□□□□ -1.71
PTCD3-216ENST00000487043 MMS19Q96T76 1030 aa4.34□□□□□ -1.71
PTCD3-216ENST00000487043 LBHD1Q9BQE6 289 aaPredicted RBP4.34□□□□□ -1.71
PTCD3-216ENST00000487043 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.34□□□□□ -1.71
PTCD3-216ENST00000487043 FSD1LQ9BXM9 530 aa4.34□□□□□ -1.71
PTCD3-216ENST00000487043 ITPAQ9BY32 194 aa4.34□□□□□ -1.71
PTCD3-216ENST00000487043 CCDC68Q9H2F9 335 aa4.34□□□□□ -1.71
PTCD3-216ENST00000487043 BRF2Q9HAW0 419 aa4.34□□□□□ -1.71
PTCD3-216ENST00000487043 SLC2A4RGQ9NR83 387 aa4.34□□□□□ -1.71
PTCD3-216ENST00000487043 SMYD2Q9NRG4 433 aa4.34□□□□□ -1.71
PTCD3-216ENST00000487043 DIAPH3Q9NSV4 1193 aa4.34□□□□□ -1.71
PTCD3-216ENST00000487043 SERTAD4Q9NUC0 356 aa4.34□□□□□ -1.71
PTCD3-216ENST00000487043 NSMCE4AQ9NXX6 385 aa4.34□□□□□ -1.71
PTCD3-216ENST00000487043 VPS28Q9UK41 221 aa4.34□□□□□ -1.71
PTCD3-216ENST00000487043 SARDHQ9UL12 918 aa4.34□□□□□ -1.71
PTCD3-216ENST00000487043 FZD4Q9ULV1 537 aa4.34□□□□□ -1.71
PTCD3-216ENST00000487043 ST3GAL5Q9UNP4 418 aa4.34□□□□□ -1.71
PTCD3-216ENST00000487043 IL16Q14005 1332 aa4.34□□□□□ -1.71
PTCD3-216ENST00000487043 NCAPD2Q15021 1401 aa4.34□□□□□ -1.71
PTCD3-216ENST00000487043 COL16A1Q07092 1604 aaPredicted RBP4.34□□□□□ -1.71
PTCD3-216ENST00000487043 COL22A1Q8NFW1 1626 aaPredicted RBP4.34□□□□□ -1.71
PTCD3-216ENST00000487043 PHLPP1O60346 1717 aa4.34□□□□□ -1.71
PTCD3-216ENST00000487043 RGPD5Q99666 1765 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 CAMTA1Q9Y6Y1 1673 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 WDR17Q8IZU2 1322 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 WDR33Q9C0J8 1336 aaKnown RBP4.33□□□□□ -1.72
PTCD3-216ENST00000487043 GOLGA6L10A0A0M3HER8 536 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 GAGE10A6NGK3 116 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 LINC00473A8K010 186 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 TEX22C9J3V5 150 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 DSCR3O14972 297 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 PER2O15055 1255 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 SPARCP09486 303 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 ZNF853P0CG23 659 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 PKMP14618 531 aaKnown RBP4.33□□□□□ -1.72
PTCD3-216ENST00000487043 IGFBP2P18065 325 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 RRM1P23921 792 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 NDUFS1P28331 727 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 ACTN2P35609 894 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 KRT20P35900 424 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 MLH1P40692 756 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 RPS6KA3P51812 740 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 UFM1P61960 85 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 CALD1Q05682 793 aaKnown RBP4.33□□□□□ -1.72
PTCD3-216ENST00000487043 MAMLD1Q13495 774 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 MFSD13AQ14CX5 517 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 SMN1Q16637 294 aaKnown RBP4.33□□□□□ -1.72
PTCD3-216ENST00000487043 AP5B1Q2VPB7 878 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 GXYLT1Q4G148 440 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 PLEKHO1Q53GL0 409 aaPredicted RBP4.33□□□□□ -1.72
PTCD3-216ENST00000487043 MIIPQ5JXC2 388 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 CFAP58Q5T655 872 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 KIAA0895LQ68EN5 471 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 ANKRD16Q6P6B7 361 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 INO80CQ6PI98 192 aaPredicted RBP4.33□□□□□ -1.72
PTCD3-216ENST00000487043 KLHL24Q6TFL4 600 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 NAPRTQ6XQN6 538 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 Q6ZNX1 250 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 ENOSF1Q7L5Y1 443 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 RNF144BQ7Z419 303 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 GALNT5Q7Z7M9 940 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 BRSK2Q8IWQ3 736 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 LAS2Q8IYD9 372 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 ADSSL1Q8N142 457 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 ADPRHL1Q8NDY3 354 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 ETNPPLQ8TBG4 499 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 CREB3L4Q8TEY5 395 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 NOC3LQ8WTT2 800 aaKnown RBP4.33□□□□□ -1.72
PTCD3-216ENST00000487043 NCSTNQ92542 709 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 LENG9Q96B70 501 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 CHFRQ96EP1 664 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 HS6ST2Q96MM7 605 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 SERINC2Q96SA4 455 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 CLSTN3Q9BQT9 956 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 MLST8Q9BVC4 326 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 CIPCQ9C0C6 399 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 LMAN2LQ9H0V9 348 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 RANBP17Q9H2T7 1088 aaKnown RBP4.33□□□□□ -1.72
PTCD3-216ENST00000487043 SFXN1Q9H9B4 322 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 SLC22A11Q9NSA0 550 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 ANKEF1Q9NU02 776 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 SEPT11Q9NVA2 429 aaKnown RBP4.33□□□□□ -1.72
PTCD3-216ENST00000487043 KCND2Q9NZV8 630 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 HCN3Q9P1Z3 774 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 REXO2Q9Y3B8 237 aaKnown RBP4.33□□□□□ -1.72
PTCD3-216ENST00000487043 TTLL3Q9Y4R7 772 aa4.33□□□□□ -1.72
PTCD3-216ENST00000487043 HEMK1Q9Y5R4 338 aaPredicted RBP4.33□□□□□ -1.72
PTCD3-216ENST00000487043 RGPD2P0DJD1 1756 aa4.32□□□□□ -1.72
PTCD3-216ENST00000487043 ABCA3Q99758 1704 aa4.32□□□□□ -1.72
PTCD3-216ENST00000487043 LMO7Q8WWI1 1683 aa4.32□□□□□ -1.72
PTCD3-216ENST00000487043 PLEKHG2Q9H7P9 1386 aa4.32□□□□□ -1.72
PTCD3-216ENST00000487043 JCADQ9P266 1359 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms