RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-223	ENST00000486991	FANCG	O15287	622 aa		13.37	□□□□□ -0.27
NR1H3-223	ENST00000486991	ZNF500	O60304	480 aa	Predicted RBP	13.37	□□□□□ -0.27
NR1H3-223	ENST00000486991	SYNCRIP	O60506	623 aa	Known RBP	13.37	□□□□□ -0.27
NR1H3-223	ENST00000486991	OPHN1	O60890	802 aa		13.37	□□□□□ -0.27
NR1H3-223	ENST00000486991	TBL1X	O60907	577 aa		13.37	□□□□□ -0.27
NR1H3-223	ENST00000486991	TUBB4A	P04350	444 aa		13.37	□□□□□ -0.27
NR1H3-223	ENST00000486991	IRAK1	P51617	712 aa		13.37	□□□□□ -0.27
NR1H3-223	ENST00000486991	ZNF135	P52742	658 aa	Predicted RBP	13.37	□□□□□ -0.27
NR1H3-223	ENST00000486991	FUT11	Q495W5	492 aa		13.37	□□□□□ -0.27
NR1H3-223	ENST00000486991	MANEAL	Q5VSG8	457 aa		13.37	□□□□□ -0.27
NR1H3-223	ENST00000486991	KAZN	Q674X7	775 aa		13.37	□□□□□ -0.27
NR1H3-223	ENST00000486991	RFX8	Q6ZV50	586 aa		13.37	□□□□□ -0.27
NR1H3-223	ENST00000486991	RFX6	Q8HWS3	928 aa		13.37	□□□□□ -0.27
NR1H3-223	ENST00000486991	ZNF683	Q8IZ20	524 aa		13.37	□□□□□ -0.27
NR1H3-223	ENST00000486991	HJURP	Q8NCD3	748 aa	Predicted RBP	13.37	□□□□□ -0.27
NR1H3-223	ENST00000486991	CEP76	Q8TAP6	659 aa		13.37	□□□□□ -0.27
NR1H3-223	ENST00000486991	TSC1	Q92574	1164 aa		13.37	□□□□□ -0.27
NR1H3-223	ENST00000486991	MYO19	Q96H55	970 aa		13.37	□□□□□ -0.27
NR1H3-223	ENST00000486991	CSPG4P5	Q96PW8	444 aa		13.37	□□□□□ -0.27
NR1H3-223	ENST00000486991	OSBPL9	Q96SU4	736 aa		13.37	□□□□□ -0.27
NR1H3-223	ENST00000486991	ZNF670	Q9BS34	389 aa		13.37	□□□□□ -0.27
NR1H3-223	ENST00000486991	MAK16	Q9BXY0	300 aa	Known RBP	13.37	□□□□□ -0.27
NR1H3-223	ENST00000486991	ZYG11B	Q9C0D3	744 aa		13.37	□□□□□ -0.27
NR1H3-223	ENST00000486991	MKRN2	Q9H000	416 aa	Known RBP	13.37	□□□□□ -0.27
NR1H3-223	ENST00000486991	CARD9	Q9H257	536 aa		13.37	□□□□□ -0.27
NR1H3-223	ENST00000486991	MPP6	Q9NZW5	540 aa		13.37	□□□□□ -0.27
NR1H3-223	ENST00000486991	RCOR3	Q9P2K3	495 aa	Predicted RBP	13.37	□□□□□ -0.27
NR1H3-223	ENST00000486991	GGA2	Q9UJY4	613 aa		13.37	□□□□□ -0.27
NR1H3-223	ENST00000486991	SNX12	Q9UMY4	172 aa		13.37	□□□□□ -0.27
NR1H3-223	ENST00000486991	PLA2G4C	Q9UP65	541 aa		13.37	□□□□□ -0.27
NR1H3-223	ENST00000486991	TP53BP1	Q12888	1972 aa	Predicted RBP	13.37	□□□□□ -0.27
NR1H3-223	ENST00000486991	DOCK9	Q9BZ29	2069 aa		13.36	□□□□□ -0.27
NR1H3-223	ENST00000486991	DRGX	A6NNA5	263 aa		13.36	□□□□□ -0.27
NR1H3-223	ENST00000486991	UPK3BL1	B0FP48	263 aa		13.36	□□□□□ -0.27
NR1H3-223	ENST00000486991	UPK3BL2	E5RIL1	263 aa		13.36	□□□□□ -0.27
NR1H3-223	ENST00000486991	CEP104	O60308	925 aa		13.36	□□□□□ -0.27
NR1H3-223	ENST00000486991	CNTN5	O94779	1100 aa		13.36	□□□□□ -0.27
NR1H3-223	ENST00000486991	ATP5B	P06576	529 aa	Known RBP	13.36	□□□□□ -0.27
NR1H3-223	ENST00000486991	PABPC1	P11940	636 aa	Known RBP	13.36	□□□□□ -0.27
NR1H3-223	ENST00000486991	KRT10	P13645	584 aa		13.36	□□□□□ -0.27
NR1H3-223	ENST00000486991	AMPD1	P23109	780 aa		13.36	□□□□□ -0.27
NR1H3-223	ENST00000486991	IL4R	P24394	825 aa		13.36	□□□□□ -0.27
NR1H3-223	ENST00000486991	HTR7	P34969	479 aa		13.36	□□□□□ -0.27
NR1H3-223	ENST00000486991	CDKN2B	P42772	138 aa		13.36	□□□□□ -0.27
NR1H3-223	ENST00000486991	HCAR3	P49019	387 aa		13.36	□□□□□ -0.27
NR1H3-223	ENST00000486991	COPS2	P61201	443 aa		13.36	□□□□□ -0.27
NR1H3-223	ENST00000486991	DYNLT1	P63172	113 aa		13.36	□□□□□ -0.27
NR1H3-223	ENST00000486991	PLEKHG6	Q3KR16	790 aa		13.36	□□□□□ -0.27
NR1H3-223	ENST00000486991	ANKRD20A8P	Q5CZ79	823 aa		13.36	□□□□□ -0.27
NR1H3-223	ENST00000486991	TFDP3	Q5H9I0	405 aa		13.36	□□□□□ -0.27
NR1H3-223	ENST00000486991	FSCB	Q5H9T9	825 aa		13.36	□□□□□ -0.27
NR1H3-223	ENST00000486991	PAPD7	Q5XG87	772 aa	Known RBP	13.36	□□□□□ -0.27
NR1H3-223	ENST00000486991	RABEPK	Q7Z6M1	372 aa		13.36	□□□□□ -0.27
NR1H3-223	ENST00000486991	TFAP2D	Q7Z6R9	452 aa		13.36	□□□□□ -0.27
NR1H3-223	ENST00000486991	AHI1	Q8N157	1196 aa		13.36	□□□□□ -0.27
NR1H3-223	ENST00000486991	PCDH19	Q8TAB3	1148 aa		13.36	□□□□□ -0.27
NR1H3-223	ENST00000486991	FIBIN	Q8TAL6	211 aa		13.36	□□□□□ -0.27
NR1H3-223	ENST00000486991	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	13.36	□□□□□ -0.27
NR1H3-223	ENST00000486991	ZNF419	Q96HQ0	510 aa	Predicted RBP	13.36	□□□□□ -0.27
NR1H3-223	ENST00000486991	PBK	Q96KB5	322 aa		13.36	□□□□□ -0.27
NR1H3-223	ENST00000486991	RNF157	Q96PX1	679 aa		13.36	□□□□□ -0.27
NR1H3-223	ENST00000486991	HEMGN	Q9BXL5	484 aa		13.36	□□□□□ -0.27
NR1H3-223	ENST00000486991	CIPC	Q9C0C6	399 aa		13.36	□□□□□ -0.27
NR1H3-223	ENST00000486991	TMEM245	Q9H330	911 aa		13.36	□□□□□ -0.27
NR1H3-223	ENST00000486991	CATSPERB	Q9H7T0	1116 aa		13.36	□□□□□ -0.27
NR1H3-223	ENST00000486991	PPARGC1A	Q9UBK2	798 aa	Known RBP	13.36	□□□□□ -0.27
NR1H3-223	ENST00000486991	MSRB2	Q9Y3D2	182 aa		13.36	□□□□□ -0.27
NR1H3-223	ENST00000486991	BAHCC1	Q9P281	2608 aa		13.36	□□□□□ -0.27
NR1H3-223	ENST00000486991	IGLV3-10	A0A075B6K4	115 aa		13.35	□□□□□ -0.27
NR1H3-223	ENST00000486991	hCG_1818297	A0A087WSY0	165 aa		13.35	□□□□□ -0.27
NR1H3-223	ENST00000486991	TMEM8B	A6NDV4	472 aa		13.35	□□□□□ -0.27
NR1H3-223	ENST00000486991	FGF10	O15520	208 aa	Predicted RBP	13.35	□□□□□ -0.27
NR1H3-223	ENST00000486991	NDUFS2	O75306	463 aa		13.35	□□□□□ -0.27
NR1H3-223	ENST00000486991	GJB3	O75712	270 aa		13.35	□□□□□ -0.27
NR1H3-223	ENST00000486991	HLA-E	P13747	358 aa		13.35	□□□□□ -0.27
NR1H3-223	ENST00000486991	RHOQ	P17081	205 aa		13.35	□□□□□ -0.27
NR1H3-223	ENST00000486991	TCP1	P17987	556 aa	Known RBP	13.35	□□□□□ -0.27
NR1H3-223	ENST00000486991	ERCC2	P18074	760 aa		13.35	□□□□□ -0.27
NR1H3-223	ENST00000486991	HOXD12	P35452	270 aa		13.35	□□□□□ -0.27
NR1H3-223	ENST00000486991	COPA	P53621	1224 aa		13.35	□□□□□ -0.27
NR1H3-223	ENST00000486991	DPYS	Q14117	519 aa		13.35	□□□□□ -0.27
NR1H3-223	ENST00000486991	PPP2R5E	Q16537	467 aa		13.35	□□□□□ -0.27
NR1H3-223	ENST00000486991	C5orf22	Q49AR2	442 aa		13.35	□□□□□ -0.27
NR1H3-223	ENST00000486991	ALF	Q53S48	1182 aa		13.35	□□□□□ -0.27
NR1H3-223	ENST00000486991	TTC39B	Q5VTQ0	682 aa	Predicted RBP	13.35	□□□□□ -0.27
NR1H3-223	ENST00000486991	MBLAC2	Q68D91	279 aa		13.35	□□□□□ -0.27
NR1H3-223	ENST00000486991	SERPINA13P	Q6UXR4	307 aa		13.35	□□□□□ -0.27
NR1H3-223	ENST00000486991	CHST9	Q7L1S5	443 aa		13.35	□□□□□ -0.27
NR1H3-223	ENST00000486991	METTL3	Q86U44	580 aa	Known RBP	13.35	□□□□□ -0.27
NR1H3-223	ENST00000486991	VSIG1	Q86XK7	387 aa		13.35	□□□□□ -0.27
NR1H3-223	ENST00000486991	CACUL1	Q86Y37	369 aa		13.35	□□□□□ -0.27
NR1H3-223	ENST00000486991	CARNMT1	Q8N4J0	409 aa		13.35	□□□□□ -0.27
NR1H3-223	ENST00000486991	KIF18A	Q8NI77	898 aa		13.35	□□□□□ -0.27
NR1H3-223	ENST00000486991	COG1	Q8WTW3	980 aa		13.35	□□□□□ -0.27
NR1H3-223	ENST00000486991	CYB5D2	Q8WUJ1	264 aa		13.35	□□□□□ -0.27
NR1H3-223	ENST00000486991	TTC17	Q96AE7	1141 aa		13.35	□□□□□ -0.27
NR1H3-223	ENST00000486991	FAF2	Q96CS3	445 aa		13.35	□□□□□ -0.27
NR1H3-223	ENST00000486991	TOE1	Q96GM8	510 aa	Known RBP	13.35	□□□□□ -0.27
NR1H3-223	ENST00000486991	GPR174	Q9BXC1	333 aa		13.35	□□□□□ -0.27
NR1H3-223	ENST00000486991	OSBPL8	Q9BZF1	889 aa		13.35	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms