RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 DUOXA1Q1HG43 343 aa18.52■□□□□ 0.56
COL1A1-207ENST00000486572 SLC23A3Q6PIS1 610 aa18.52■□□□□ 0.56
COL1A1-207ENST00000486572 NCEH1Q6PIU2 408 aa18.52■□□□□ 0.56
COL1A1-207ENST00000486572 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.52■□□□□ 0.56
COL1A1-207ENST00000486572 OR2T34Q8NGX1 318 aa18.52■□□□□ 0.56
COL1A1-207ENST00000486572 OR14C36Q8NHC7 312 aa18.52■□□□□ 0.56
COL1A1-207ENST00000486572 SNX19Q92543 992 aa18.52■□□□□ 0.56
COL1A1-207ENST00000486572 PPP1R16AQ96I34 528 aa18.52■□□□□ 0.56
COL1A1-207ENST00000486572 HEPHQ9BQS7 1158 aa18.52■□□□□ 0.56
COL1A1-207ENST00000486572 NUSAP1Q9BXS6 441 aaKnown RBP18.52■□□□□ 0.56
COL1A1-207ENST00000486572 PDFQ9HBH1 243 aa18.52■□□□□ 0.56
COL1A1-207ENST00000486572 HECAQ9UBI9 543 aaPredicted RBP18.52■□□□□ 0.56
COL1A1-207ENST00000486572 UBA2Q9UBT2 640 aaPredicted RBP18.52■□□□□ 0.56
COL1A1-207ENST00000486572 PCDHA13Q9Y5I0 950 aa18.52■□□□□ 0.56
COL1A1-207ENST00000486572 WASF2Q9Y6W5 498 aa18.52■□□□□ 0.56
COL1A1-207ENST00000486572 NUMA1Q14980 2115 aa18.52■□□□□ 0.55
COL1A1-207ENST00000486572 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.51■□□□□ 0.55
COL1A1-207ENST00000486572 J3KR12 359 aa18.51■□□□□ 0.55
COL1A1-207ENST00000486572 DFFAO00273 331 aa18.51■□□□□ 0.55
COL1A1-207ENST00000486572 PLK4O00444 970 aa18.51■□□□□ 0.55
COL1A1-207ENST00000486572 GDF9O60383 454 aa18.51■□□□□ 0.55
COL1A1-207ENST00000486572 LEFTY1O75610 366 aa18.51■□□□□ 0.55
COL1A1-207ENST00000486572 FSBPO95073 299 aa18.51■□□□□ 0.55
COL1A1-207ENST00000486572 NDUFA10O95299 355 aa18.51■□□□□ 0.55
COL1A1-207ENST00000486572 IPO7O95373 1038 aaKnown RBP18.51■□□□□ 0.55
COL1A1-207ENST00000486572 CFIP05156 583 aa18.51■□□□□ 0.55
COL1A1-207ENST00000486572 CD48P09326 243 aa18.51■□□□□ 0.55
COL1A1-207ENST00000486572 GNSP15586 552 aa18.51■□□□□ 0.55
COL1A1-207ENST00000486572 SERPINB6P35237 376 aa18.51■□□□□ 0.55
COL1A1-207ENST00000486572 ARSEP51690 589 aa18.51■□□□□ 0.55
COL1A1-207ENST00000486572 RHOAP61586 193 aa18.51■□□□□ 0.55
COL1A1-207ENST00000486572 SNRPD1P62314 119 aaKnown RBP18.51■□□□□ 0.55
COL1A1-207ENST00000486572 DPYSL3Q14195 570 aa18.51■□□□□ 0.55
COL1A1-207ENST00000486572 PDK2Q15119 407 aa18.51■□□□□ 0.55
COL1A1-207ENST00000486572 ATP13A4Q4VNC1 1196 aa18.51■□□□□ 0.55
COL1A1-207ENST00000486572 ARSIQ5FYB1 569 aa18.51■□□□□ 0.55
COL1A1-207ENST00000486572 AGBL4Q5VU57 503 aa18.51■□□□□ 0.55
COL1A1-207ENST00000486572 KIAA0895LQ68EN5 471 aa18.51■□□□□ 0.55
COL1A1-207ENST00000486572 RYBPQ8N488 228 aaPredicted RBP18.51■□□□□ 0.55
COL1A1-207ENST00000486572 SPC24Q8NBT2 197 aa18.51■□□□□ 0.55
COL1A1-207ENST00000486572 KCTD6Q8NC69 237 aa18.51■□□□□ 0.55
COL1A1-207ENST00000486572 NETO1Q8TDF5 533 aa18.51■□□□□ 0.55
COL1A1-207ENST00000486572 BIRC7Q96CA5 298 aa18.51■□□□□ 0.55
COL1A1-207ENST00000486572 GDAP1L1Q96MZ0 367 aa18.51■□□□□ 0.55
COL1A1-207ENST00000486572 ZNF670Q9BS34 389 aa18.51■□□□□ 0.55
COL1A1-207ENST00000486572 CALN1Q9BXU9 219 aa18.51■□□□□ 0.55
COL1A1-207ENST00000486572 MIR1-1HGQ9H1L0 117 aa18.51■□□□□ 0.55
COL1A1-207ENST00000486572 ZDHHC6Q9H6R6 413 aa18.51■□□□□ 0.55
COL1A1-207ENST00000486572 SP110Q9HB58 689 aa18.51■□□□□ 0.55
COL1A1-207ENST00000486572 DYRK4Q9NR20 520 aa18.51■□□□□ 0.55
COL1A1-207ENST00000486572 RXFP3Q9NSD7 469 aa18.51■□□□□ 0.55
COL1A1-207ENST00000486572 ETNK2Q9NVF9 386 aa18.51■□□□□ 0.55
COL1A1-207ENST00000486572 KLHL11Q9NVR0 708 aa18.51■□□□□ 0.55
COL1A1-207ENST00000486572 EIF2B4Q9UI10 523 aaKnown RBP18.51■□□□□ 0.55
COL1A1-207ENST00000486572 MFHAS1Q9Y4C4 1052 aa18.51■□□□□ 0.55
COL1A1-207ENST00000486572 EPN1Q9Y6I3 576 aaPredicted RBP18.51■□□□□ 0.55
COL1A1-207ENST00000486572 PLRG1O43660 514 aaKnown RBP18.5■□□□□ 0.55
COL1A1-207ENST00000486572 IGSF6O95976 241 aa18.5■□□□□ 0.55
COL1A1-207ENST00000486572 SERPINF2P08697 491 aa18.5■□□□□ 0.55
COL1A1-207ENST00000486572 SDHBP21912 280 aa18.5■□□□□ 0.55
COL1A1-207ENST00000486572 IL4RP24394 825 aa18.5■□□□□ 0.55
COL1A1-207ENST00000486572 HADHBP55084 474 aaKnown RBP18.5■□□□□ 0.55
COL1A1-207ENST00000486572 IRX4P78413 519 aa18.5■□□□□ 0.55
COL1A1-207ENST00000486572 CCDC15Q0P6D6 951 aa18.5■□□□□ 0.55
COL1A1-207ENST00000486572 MMRN1Q13201 1228 aa18.5■□□□□ 0.55
COL1A1-207ENST00000486572 ATXN7L2Q5T6C5 722 aaPredicted RBP18.5■□□□□ 0.55
COL1A1-207ENST00000486572 MAP7D3Q8IWC1 876 aa18.5■□□□□ 0.55
COL1A1-207ENST00000486572 ZCCHC9Q8N567 271 aaKnown RBP18.5■□□□□ 0.55
COL1A1-207ENST00000486572 NETO2Q8NC67 525 aa18.5■□□□□ 0.55
COL1A1-207ENST00000486572 OR6K2Q8NGY2 324 aa18.5■□□□□ 0.55
COL1A1-207ENST00000486572 ARRDC3Q96B67 414 aa18.5■□□□□ 0.55
COL1A1-207ENST00000486572 LRIG1Q96JA1 1093 aa18.5■□□□□ 0.55
COL1A1-207ENST00000486572 BAG1Q99933 345 aaPredicted RBP18.5■□□□□ 0.55
COL1A1-207ENST00000486572 EDEM2Q9BV94 578 aa18.5■□□□□ 0.55
COL1A1-207ENST00000486572 KDM4CQ9H3R0 1056 aa18.5■□□□□ 0.55
COL1A1-207ENST00000486572 CDV3Q9UKY7 258 aaKnown RBP18.5■□□□□ 0.55
COL1A1-207ENST00000486572 SLC6A14Q9UN76 642 aa18.5■□□□□ 0.55
COL1A1-207ENST00000486572 CEP250Q9BV73 2442 aa18.5■□□□□ 0.55
COL1A1-207ENST00000486572 A0A1B0GTW7 788 aa18.49■□□□□ 0.55
COL1A1-207ENST00000486572 GOLGA6L6A8MZA4 724 aa18.49■□□□□ 0.55
COL1A1-207ENST00000486572 RNF103O00237 685 aa18.49■□□□□ 0.55
COL1A1-207ENST00000486572 KRIT1O00522 736 aa18.49■□□□□ 0.55
COL1A1-207ENST00000486572 IGHV4-34P06331 123 aa18.49■□□□□ 0.55
COL1A1-207ENST00000486572 ITGB7P26010 798 aa18.49■□□□□ 0.55
COL1A1-207ENST00000486572 SLC1A1P43005 524 aa18.49■□□□□ 0.55
COL1A1-207ENST00000486572 NOP2P46087 812 aaKnown RBP18.49■□□□□ 0.55
COL1A1-207ENST00000486572 IL10RBQ08334 325 aa18.49■□□□□ 0.55
COL1A1-207ENST00000486572 RSPO4Q2I0M5 234 aaPredicted RBP18.49■□□□□ 0.55
COL1A1-207ENST00000486572 ZFYVE27Q5T4F4 411 aa18.49■□□□□ 0.55
COL1A1-207ENST00000486572 PIP5KL1Q5T9C9 394 aa18.49■□□□□ 0.55
COL1A1-207ENST00000486572 RAD9BQ6WBX8 426 aa18.49■□□□□ 0.55
COL1A1-207ENST00000486572 ARHGAP36Q6ZRI8 547 aa18.49■□□□□ 0.55
COL1A1-207ENST00000486572 HDAC8Q9BY41 377 aa18.49■□□□□ 0.55
COL1A1-207ENST00000486572 CAPN10Q9HC96 672 aa18.49■□□□□ 0.55
COL1A1-207ENST00000486572 LHX3Q9UBR4 397 aa18.49■□□□□ 0.55
COL1A1-207ENST00000486572 IPO11Q9UI26 975 aaKnown RBP18.49■□□□□ 0.55
COL1A1-207ENST00000486572 TPX2Q9ULW0 747 aaKnown RBP18.49■□□□□ 0.55
COL1A1-207ENST00000486572 DMXL1Q9Y485 3027 aa18.48■□□□□ 0.55
COL1A1-207ENST00000486572 GON4LQ3T8J9 2241 aa18.48■□□□□ 0.55
COL1A1-207ENST00000486572 TBC1D3DA0A087WVF3 549 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms