RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 WNT3AP56704 352 aa12.13□□□□□ -0.47
PKP4-213ENST00000486254 PDE1BQ01064 536 aa12.13□□□□□ -0.47
PKP4-213ENST00000486254 FAM133BQ5BKY9 247 aaKnown RBP12.13□□□□□ -0.47
PKP4-213ENST00000486254 FAM182AQ5T1J6 154 aa12.13□□□□□ -0.47
PKP4-213ENST00000486254 FAM91A1Q658Y4 838 aa12.13□□□□□ -0.47
PKP4-213ENST00000486254 CCDC91Q7Z6B0 441 aa12.13□□□□□ -0.47
PKP4-213ENST00000486254 CLEC14AQ86T13 490 aa12.13□□□□□ -0.47
PKP4-213ENST00000486254 SETD3Q86TU7 594 aaPredicted RBP12.13□□□□□ -0.47
PKP4-213ENST00000486254 UNC5BQ8IZJ1 945 aa12.13□□□□□ -0.47
PKP4-213ENST00000486254 BBS5Q8N3I7 341 aa12.13□□□□□ -0.47
PKP4-213ENST00000486254 IPMKQ8NFU5 416 aa12.13□□□□□ -0.47
PKP4-213ENST00000486254 SPATA22Q8NHS9 363 aa12.13□□□□□ -0.47
PKP4-213ENST00000486254 GPR152Q8TDT2 470 aa12.13□□□□□ -0.47
PKP4-213ENST00000486254 SCG3Q8WXD2 468 aaKnown RBP12.13□□□□□ -0.47
PKP4-213ENST00000486254 PTPRN2Q92932 1015 aa12.13□□□□□ -0.47
PKP4-213ENST00000486254 ZNF512Q96ME7 567 aaPredicted RBP12.13□□□□□ -0.47
PKP4-213ENST00000486254 FICDQ9BVA6 458 aa12.13□□□□□ -0.47
PKP4-213ENST00000486254 ABCF3Q9NUQ8 709 aa12.13□□□□□ -0.47
PKP4-213ENST00000486254 WBP1LQ9NX94 342 aa12.13□□□□□ -0.47
PKP4-213ENST00000486254 ANKRD6Q9Y2G4 727 aa12.13□□□□□ -0.47
PKP4-213ENST00000486254 ASB3Q9Y575 518 aa12.13□□□□□ -0.47
PKP4-213ENST00000486254 A0A1B0GVM2 712 aa12.13□□□□□ -0.47
PKP4-213ENST00000486254 ILVBLA1L0T0 632 aa12.13□□□□□ -0.47
PKP4-213ENST00000486254 TCAF2A6NFQ2 919 aa12.13□□□□□ -0.47
PKP4-213ENST00000486254 HNRNPCL1O60812 293 aaKnown RBP12.13□□□□□ -0.47
PKP4-213ENST00000486254 SEC24AO95486 1093 aa12.13□□□□□ -0.47
PKP4-213ENST00000486254 OLFM2O95897 454 aa12.13□□□□□ -0.47
PKP4-213ENST00000486254 MT-CYBP00156 380 aaPredicted RBP12.13□□□□□ -0.47
PKP4-213ENST00000486254 COL6A2P12110 1019 aa12.13□□□□□ -0.47
PKP4-213ENST00000486254 PFKLP17858 780 aa12.13□□□□□ -0.47
PKP4-213ENST00000486254 GRK2P25098 689 aa12.13□□□□□ -0.47
PKP4-213ENST00000486254 TYK2P29597 1187 aa12.13□□□□□ -0.47
PKP4-213ENST00000486254 OR1E1P30953 314 aa12.13□□□□□ -0.47
PKP4-213ENST00000486254 ARCN1P48444 511 aaKnown RBP12.13□□□□□ -0.47
PKP4-213ENST00000486254 LIG3P49916 1009 aa12.13□□□□□ -0.47
PKP4-213ENST00000486254 OCRLQ01968 901 aa12.13□□□□□ -0.47
PKP4-213ENST00000486254 OLIG2Q13516 323 aa12.13□□□□□ -0.47
PKP4-213ENST00000486254 FSTL4Q6MZW2 842 aa12.13□□□□□ -0.47
PKP4-213ENST00000486254 FBXO46Q6PJ61 603 aaPredicted RBP12.13□□□□□ -0.47
PKP4-213ENST00000486254 TFAP2DQ7Z6R9 452 aa12.13□□□□□ -0.47
PKP4-213ENST00000486254 STRA8Q7Z7C7 330 aa12.13□□□□□ -0.47
PKP4-213ENST00000486254 CALML6Q8TD86 181 aa12.13□□□□□ -0.47
PKP4-213ENST00000486254 USP33Q8TEY7 942 aa12.13□□□□□ -0.47
PKP4-213ENST00000486254 GIPC2Q8TF65 315 aa12.13□□□□□ -0.47
PKP4-213ENST00000486254 E2F7Q96AV8 911 aa12.13□□□□□ -0.47
PKP4-213ENST00000486254 VPS39Q96JC1 886 aa12.13□□□□□ -0.47
PKP4-213ENST00000486254 FEM1CQ96JP0 617 aa12.13□□□□□ -0.47
PKP4-213ENST00000486254 RMDN2Q96LZ7 410 aa12.13□□□□□ -0.47
PKP4-213ENST00000486254 LRRC37BQ96QE4 947 aa12.13□□□□□ -0.47
PKP4-213ENST00000486254 POLR1EQ9GZS1 481 aaKnown RBP12.13□□□□□ -0.47
PKP4-213ENST00000486254 STN1Q9H668 368 aaKnown RBP12.13□□□□□ -0.47
PKP4-213ENST00000486254 CHRAC1Q9NRG0 131 aa12.13□□□□□ -0.47
PKP4-213ENST00000486254 SNX15Q9NRS6 342 aa12.13□□□□□ -0.47
PKP4-213ENST00000486254 C20orf96Q9NUD7 363 aaPredicted RBP12.13□□□□□ -0.47
PKP4-213ENST00000486254 PIH1D1Q9NWS0 290 aaKnown RBP12.13□□□□□ -0.47
PKP4-213ENST00000486254 OBSL1O75147 1896 aa12.12□□□□□ -0.47
PKP4-213ENST00000486254 LOC285095A0A1B0GVY8 99 aa12.12□□□□□ -0.47
PKP4-213ENST00000486254 COCHO43405 550 aa12.12□□□□□ -0.47
PKP4-213ENST00000486254 DNAJC6O75061 913 aa12.12□□□□□ -0.47
PKP4-213ENST00000486254 H2AFYO75367 372 aaKnown RBP12.12□□□□□ -0.47
PKP4-213ENST00000486254 STC2O76061 302 aa12.12□□□□□ -0.47
PKP4-213ENST00000486254 GSRP00390 522 aa12.12□□□□□ -0.47
PKP4-213ENST00000486254 PROCP04070 461 aa12.12□□□□□ -0.47
PKP4-213ENST00000486254 FGF1P05230 155 aa12.12□□□□□ -0.47
PKP4-213ENST00000486254 MMP2P08253 660 aa12.12□□□□□ -0.47
PKP4-213ENST00000486254 HLA-DPA1P20036 260 aa12.12□□□□□ -0.47
PKP4-213ENST00000486254 NMBRP28336 390 aa12.12□□□□□ -0.47
PKP4-213ENST00000486254 HOXD9P28356 352 aaPredicted RBP12.12□□□□□ -0.47
PKP4-213ENST00000486254 SERPINH1P50454 418 aaKnown RBP12.12□□□□□ -0.47
PKP4-213ENST00000486254 WDR5P61964 334 aaKnown RBP12.12□□□□□ -0.47
PKP4-213ENST00000486254 SLC10A7Q0GE19 358 aa12.12□□□□□ -0.47
PKP4-213ENST00000486254 MSLNQ13421 630 aaPredicted RBP12.12□□□□□ -0.47
PKP4-213ENST00000486254 LBRQ14739 615 aaKnown RBP12.12□□□□□ -0.47
PKP4-213ENST00000486254 SPRED3Q2MJR0 410 aa12.12□□□□□ -0.47
PKP4-213ENST00000486254 HSP90AA5PQ58FG0 334 aa12.12□□□□□ -0.47
PKP4-213ENST00000486254 ITIH5Q86UX2 942 aa12.12□□□□□ -0.47
PKP4-213ENST00000486254 ZC3HC1Q86WB0 502 aaKnown RBP12.12□□□□□ -0.47
PKP4-213ENST00000486254 NUDCD3Q8IVD9 361 aa12.12□□□□□ -0.47
PKP4-213ENST00000486254 C10orf67Q8IYJ2 551 aa12.12□□□□□ -0.47
PKP4-213ENST00000486254 DCLK2Q8N568 766 aa12.12□□□□□ -0.47
PKP4-213ENST00000486254 FITM2Q8N6M3 262 aa12.12□□□□□ -0.47
PKP4-213ENST00000486254 ARMC2Q8NEN0 867 aa12.12□□□□□ -0.47
PKP4-213ENST00000486254 ARRDC2Q8TBH0 407 aa12.12□□□□□ -0.47
PKP4-213ENST00000486254 RDH11Q8TC12 318 aa12.12□□□□□ -0.47
PKP4-213ENST00000486254 PSMG2Q969U7 264 aa12.12□□□□□ -0.47
PKP4-213ENST00000486254 MGME1Q9BQP7 344 aa12.12□□□□□ -0.47
PKP4-213ENST00000486254 FAM96AQ9H5X1 160 aa12.12□□□□□ -0.47
PKP4-213ENST00000486254 C11orf49Q9H6J7 331 aa12.12□□□□□ -0.47
PKP4-213ENST00000486254 TXLNGQ9NUQ3 528 aa12.12□□□□□ -0.47
PKP4-213ENST00000486254 THAP1Q9NVV9 213 aa12.12□□□□□ -0.47
PKP4-213ENST00000486254 KCNK4Q9NYG8 393 aa12.12□□□□□ -0.47
PKP4-213ENST00000486254 UBP1Q9NZI7 540 aa12.12□□□□□ -0.47
PKP4-213ENST00000486254 EMCNQ9ULC0 261 aa12.12□□□□□ -0.47
PKP4-213ENST00000486254 ATP11BQ9Y2G3 1177 aa12.12□□□□□ -0.47
PKP4-213ENST00000486254 TBC1D30Q9Y2I9 924 aa12.12□□□□□ -0.47
PKP4-213ENST00000486254 MTO1Q9Y2Z2 717 aaKnown RBP12.12□□□□□ -0.47
PKP4-213ENST00000486254 MYLKQ15746 1914 aa12.12□□□□□ -0.47
PKP4-213ENST00000486254 CXorf51AA0A1B0GTR3 108 aa12.11□□□□□ -0.47
PKP4-213ENST00000486254 H3BNC9 293 aa12.11□□□□□ -0.47
PKP4-213ENST00000486254 J3KR12 359 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms