RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 FAM149B1Q96BN6 582 aa9.64□□□□□ -0.87
TMEM39A-208ENST00000486159 PKNOX2Q96KN3 472 aa9.64□□□□□ -0.87
TMEM39A-208ENST00000486159 RPL10LQ96L21 214 aaKnown RBP9.64□□□□□ -0.87
TMEM39A-208ENST00000486159 HSFY1Q96LI6 401 aa9.64□□□□□ -0.87
TMEM39A-208ENST00000486159 PSMB7Q99436 277 aa9.64□□□□□ -0.87
TMEM39A-208ENST00000486159 TM9SF3Q9HD45 589 aa9.64□□□□□ -0.87
TMEM39A-208ENST00000486159 SUSD2Q9UGT4 822 aa9.64□□□□□ -0.87
TMEM39A-208ENST00000486159 ANAPC7Q9UJX3 599 aa9.64□□□□□ -0.87
TMEM39A-208ENST00000486159 PACSIN2Q9UNF0 486 aaPredicted RBP9.64□□□□□ -0.87
TMEM39A-208ENST00000486159 PLA2G4CQ9UP65 541 aa9.64□□□□□ -0.87
TMEM39A-208ENST00000486159 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.64□□□□□ -0.87
TMEM39A-208ENST00000486159 PCDHB9Q9Y5E1 797 aa9.64□□□□□ -0.87
TMEM39A-208ENST00000486159 TP53BP1Q12888 1972 aaPredicted RBP9.64□□□□□ -0.87
TMEM39A-208ENST00000486159 DMXL2Q8TDJ6 3036 aa9.64□□□□□ -0.87
TMEM39A-208ENST00000486159 DOCK9Q9BZ29 2069 aa9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 A0A1W2PP55 124 aa9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 FAM149AA5PLN7 773 aa9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 FAM221BA6H8Z2 402 aa9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 E5RJQ4 531 aa9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 H0Y8X5 98 aa9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 CBX4O00257 560 aa9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 NPC1O15118 1278 aa9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 MID1O15344 667 aa9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 SEMA4FO95754 770 aa9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 WNT1P04628 370 aa9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 RRM1P23921 792 aa9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 MZF1P28698 734 aaPredicted RBP9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 GGCXP38435 758 aa9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 MATKP42679 507 aa9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 RPL34P49207 117 aaKnown RBP9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 SLC11A2P49281 568 aa9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 VSNL1P62760 191 aa9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 NNTQ13423 1086 aa9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 MAMLD1Q13495 774 aa9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 CUL1Q13616 776 aa9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 PIGHQ14442 188 aaPredicted RBP9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 PITRM1Q5JRX3 1037 aa9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 C9orf64Q5T6V5 341 aa9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 LRRC38Q5VT99 294 aa9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 EMBQ6PCB8 327 aa9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 DBX2Q6ZNG2 339 aa9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 RABEPKQ7Z6M1 372 aa9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 DNAAF5Q86Y56 855 aa9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 MMAAQ8IVH4 418 aaKnown RBP9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 LGI2Q8N0V4 545 aa9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 STK40Q8N2I9 435 aa9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 C3orf20Q8ND61 904 aa9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 OR52K2Q8NGK3 314 aa9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 FIBINQ8TAL6 211 aa9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 BAHD1Q8TBE0 780 aaPredicted RBP9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 RHBDD1Q8TEB9 315 aa9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 WFIKKN2Q8TEU8 576 aa9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 FNIP1Q8TF40 1166 aa9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 IRGQQ8WZA9 623 aa9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 TTC17Q96AE7 1141 aa9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 MS4A14Q96JA4 679 aa9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 SLC6A18Q96N87 628 aa9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 HS3ST6Q96QI5 342 aa9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 FAM129BQ96TA1 746 aa9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 C11orf70Q9BRQ4 267 aa9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 LRRC1Q9BTT6 524 aa9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 BTBD1Q9H0C5 482 aa9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 NEUROG2Q9H2A3 272 aa9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 HOMER3Q9NSC5 361 aa9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 ZNF446Q9NWS9 450 aa9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 FAM53CQ9NYF3 392 aa9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 ERVW-1Q9UQF0 538 aa9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 ANKRD6Q9Y2G4 727 aa9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 SNX10Q9Y5X0 201 aa9.63□□□□□ -0.87
TMEM39A-208ENST00000486159 NYNRINQ9P2P1 1898 aaKnown RBP9.62□□□□□ -0.87
TMEM39A-208ENST00000486159 FREM2Q5SZK8 3169 aa9.62□□□□□ -0.87
TMEM39A-208ENST00000486159 SYNJ2BP-COX16A0A087WUM0 186 aa9.62□□□□□ -0.87
TMEM39A-208ENST00000486159 FAM187AA6NFU0 413 aa9.62□□□□□ -0.87
TMEM39A-208ENST00000486159 TMEM191CA6NGB0 347 aa9.62□□□□□ -0.87
TMEM39A-208ENST00000486159 RNF103O00237 685 aa9.62□□□□□ -0.87
TMEM39A-208ENST00000486159 MAP2K7O14733 419 aa9.62□□□□□ -0.87
TMEM39A-208ENST00000486159 GRAP2O75791 330 aa9.62□□□□□ -0.87
TMEM39A-208ENST00000486159 LUC7L3O95232 432 aaKnown RBP9.62□□□□□ -0.87
TMEM39A-208ENST00000486159 LATS1O95835 1130 aa9.62□□□□□ -0.87
TMEM39A-208ENST00000486159 FGGP02679 453 aa9.62□□□□□ -0.87
TMEM39A-208ENST00000486159 DNTTP04053 509 aa9.62□□□□□ -0.87
TMEM39A-208ENST00000486159 TACR2P21452 398 aa9.62□□□□□ -0.87
TMEM39A-208ENST00000486159 CHRNA3P32297 505 aa9.62□□□□□ -0.87
TMEM39A-208ENST00000486159 GABRB2P47870 512 aa9.62□□□□□ -0.87
TMEM39A-208ENST00000486159 DNA2P51530 1060 aa9.62□□□□□ -0.87
TMEM39A-208ENST00000486159 SLC14A1Q13336 389 aa9.62□□□□□ -0.87
TMEM39A-208ENST00000486159 DHX34Q14147 1143 aaKnown RBP9.62□□□□□ -0.87
TMEM39A-208ENST00000486159 SHBQ15464 509 aa9.62□□□□□ -0.87
TMEM39A-208ENST00000486159 CCDC157Q569K6 752 aa9.62□□□□□ -0.87
TMEM39A-208ENST00000486159 NUGGCQ68CJ6 796 aa9.62□□□□□ -0.87
TMEM39A-208ENST00000486159 DNAJC24Q6P3W2 148 aa9.62□□□□□ -0.87
TMEM39A-208ENST00000486159 C14orf80Q86SX3 495 aa9.62□□□□□ -0.87
TMEM39A-208ENST00000486159 GATAD2AQ86YP4 633 aa9.62□□□□□ -0.87
TMEM39A-208ENST00000486159 PASD1Q8IV76 773 aa9.62□□□□□ -0.87
TMEM39A-208ENST00000486159 UNC45BQ8IWX7 931 aa9.62□□□□□ -0.87
TMEM39A-208ENST00000486159 RHOT1Q8IXI2 618 aa9.62□□□□□ -0.87
TMEM39A-208ENST00000486159 KRT222Q8N1A0 295 aa9.62□□□□□ -0.87
TMEM39A-208ENST00000486159 AADATQ8N5Z0 425 aa9.62□□□□□ -0.87
TMEM39A-208ENST00000486159 NIPA2Q8N8Q9 360 aa9.62□□□□□ -0.87
TMEM39A-208ENST00000486159 HJURPQ8NCD3 748 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms