RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 UBA2Q9UBT2 640 aaPredicted RBP18.09■□□□□ 0.49
SREBF1-213ENST00000485080 IL36AQ9UHA7 158 aa18.09■□□□□ 0.49
SREBF1-213ENST00000485080 IPO11Q9UI26 975 aaKnown RBP18.09■□□□□ 0.49
SREBF1-213ENST00000485080 TPX2Q9ULW0 747 aaKnown RBP18.09■□□□□ 0.49
SREBF1-213ENST00000485080 TFR2Q9UP52 801 aa18.09■□□□□ 0.49
SREBF1-213ENST00000485080 MFHAS1Q9Y4C4 1052 aa18.09■□□□□ 0.49
SREBF1-213ENST00000485080 ACTL7AQ9Y615 435 aa18.09■□□□□ 0.49
SREBF1-213ENST00000485080 WASF2Q9Y6W5 498 aa18.09■□□□□ 0.49
SREBF1-213ENST00000485080 C3orf70A6NLC5 250 aaPredicted RBP18.08■□□□□ 0.48
SREBF1-213ENST00000485080 METTL12A8MUP2 240 aa18.08■□□□□ 0.48
SREBF1-213ENST00000485080 J3KR12 359 aa18.08■□□□□ 0.48
SREBF1-213ENST00000485080 ARHGAP6O43182 974 aa18.08■□□□□ 0.48
SREBF1-213ENST00000485080 SPOPO43791 374 aa18.08■□□□□ 0.48
SREBF1-213ENST00000485080 POP4O95707 220 aaKnown RBP18.08■□□□□ 0.48
SREBF1-213ENST00000485080 SEMA4FO95754 770 aa18.08■□□□□ 0.48
SREBF1-213ENST00000485080 ZNF806P0C7X5 589 aa18.08■□□□□ 0.48
SREBF1-213ENST00000485080 ACSL1P33121 698 aa18.08■□□□□ 0.48
SREBF1-213ENST00000485080 MPLP40238 635 aa18.08■□□□□ 0.48
SREBF1-213ENST00000485080 DHPSP49366 369 aaPredicted RBP18.08■□□□□ 0.48
SREBF1-213ENST00000485080 CCNHP51946 323 aaPredicted RBP18.08■□□□□ 0.48
SREBF1-213ENST00000485080 CCDC15Q0P6D6 951 aa18.08■□□□□ 0.48
SREBF1-213ENST00000485080 CYTH1Q15438 398 aa18.08■□□□□ 0.48
SREBF1-213ENST00000485080 TAZQ16635 292 aa18.08■□□□□ 0.48
SREBF1-213ENST00000485080 CYP2U1Q7Z449 544 aa18.08■□□□□ 0.48
SREBF1-213ENST00000485080 ZNF354CQ86Y25 554 aa18.08■□□□□ 0.48
SREBF1-213ENST00000485080 SYT12Q8IV01 421 aa18.08■□□□□ 0.48
SREBF1-213ENST00000485080 HDDC3Q8N4P3 179 aa18.08■□□□□ 0.48
SREBF1-213ENST00000485080 DCLK2Q8N568 766 aa18.08■□□□□ 0.48
SREBF1-213ENST00000485080 CHST14Q8NCH0 376 aa18.08■□□□□ 0.48
SREBF1-213ENST00000485080 FATE1Q969F0 183 aa18.08■□□□□ 0.48
SREBF1-213ENST00000485080 RNF157Q96PX1 679 aa18.08■□□□□ 0.48
SREBF1-213ENST00000485080 OMDQ99983 421 aa18.08■□□□□ 0.48
SREBF1-213ENST00000485080 GPR174Q9BXC1 333 aa18.08■□□□□ 0.48
SREBF1-213ENST00000485080 HDAC8Q9BY41 377 aa18.08■□□□□ 0.48
SREBF1-213ENST00000485080 NEUROG2Q9H2A3 272 aa18.08■□□□□ 0.48
SREBF1-213ENST00000485080 ARRDC1-AS1Q9H2J1 176 aa18.08■□□□□ 0.48
SREBF1-213ENST00000485080 VPS45Q9NRW7 570 aa18.08■□□□□ 0.48
SREBF1-213ENST00000485080 HECAQ9UBI9 543 aaPredicted RBP18.08■□□□□ 0.48
SREBF1-213ENST00000485080 SERGEFQ9UGK8 458 aa18.08■□□□□ 0.48
SREBF1-213ENST00000485080 PILRBQ9UKJ0 227 aa18.08■□□□□ 0.48
SREBF1-213ENST00000485080 A0A1W2PP55 124 aa18.07■□□□□ 0.48
SREBF1-213ENST00000485080 RNASEH2AO75792 299 aaKnown RBP18.07■□□□□ 0.48
SREBF1-213ENST00000485080 CSNK1DP48730 415 aa18.07■□□□□ 0.48
SREBF1-213ENST00000485080 CREB5Q02930 508 aa18.07■□□□□ 0.48
SREBF1-213ENST00000485080 NSUN2Q08J23 767 aaKnown RBP eCLIP18.07■□□□□ 0.48
SREBF1-213ENST00000485080 MYLK3Q32MK0 819 aa18.07■□□□□ 0.48
SREBF1-213ENST00000485080 WDR45BQ5MNZ6 344 aa18.07■□□□□ 0.48
SREBF1-213ENST00000485080 SYCP2LQ5T4T6 812 aa18.07■□□□□ 0.48
SREBF1-213ENST00000485080 NCBP2-AS2Q69YL0 99 aa18.07■□□□□ 0.48
SREBF1-213ENST00000485080 KIAA1328Q86T90 577 aa18.07■□□□□ 0.48
SREBF1-213ENST00000485080 PQLC3Q8N755 202 aa18.07■□□□□ 0.48
SREBF1-213ENST00000485080 HSPA12BQ96MM6 686 aa18.07■□□□□ 0.48
SREBF1-213ENST00000485080 GDAP1L1Q96MZ0 367 aa18.07■□□□□ 0.48
SREBF1-213ENST00000485080 OSBPL1AQ9BXW6 950 aa18.07■□□□□ 0.48
SREBF1-213ENST00000485080 PARD6AQ9NPB6 346 aa18.07■□□□□ 0.48
SREBF1-213ENST00000485080 SEMA4GQ9NTN9 838 aa18.07■□□□□ 0.48
SREBF1-213ENST00000485080 LHX3Q9UBR4 397 aa18.07■□□□□ 0.48
SREBF1-213ENST00000485080 DUSP10Q9Y6W6 482 aa18.07■□□□□ 0.48
SREBF1-213ENST00000485080 DFFAO00273 331 aa18.06■□□□□ 0.48
SREBF1-213ENST00000485080 BNIP3LO60238 219 aa18.06■□□□□ 0.48
SREBF1-213ENST00000485080 MAFKO60675 156 aa18.06■□□□□ 0.48
SREBF1-213ENST00000485080 LEFTY1O75610 366 aa18.06■□□□□ 0.48
SREBF1-213ENST00000485080 PEX11BO96011 259 aa18.06■□□□□ 0.48
SREBF1-213ENST00000485080 GJC1P36383 396 aa18.06■□□□□ 0.48
SREBF1-213ENST00000485080 DNA2P51530 1060 aa18.06■□□□□ 0.48
SREBF1-213ENST00000485080 GALNT2Q10471 571 aa18.06■□□□□ 0.48
SREBF1-213ENST00000485080 KIF5AQ12840 1032 aa18.06■□□□□ 0.48
SREBF1-213ENST00000485080 IFI16Q16666 785 aaKnown RBP18.06■□□□□ 0.48
SREBF1-213ENST00000485080 ARSIQ5FYB1 569 aa18.06■□□□□ 0.48
SREBF1-213ENST00000485080 AGBL4Q5VU57 503 aa18.06■□□□□ 0.48
SREBF1-213ENST00000485080 RABEPKQ7Z6M1 372 aa18.06■□□□□ 0.48
SREBF1-213ENST00000485080 FAM124AQ86V42 546 aa18.06■□□□□ 0.48
SREBF1-213ENST00000485080 LRRC8AQ8IWT6 810 aa18.06■□□□□ 0.48
SREBF1-213ENST00000485080 TP53INP2Q8IXH6 220 aa18.06■□□□□ 0.48
SREBF1-213ENST00000485080 KATNAL2Q8IYT4 538 aa18.06■□□□□ 0.48
SREBF1-213ENST00000485080 LRRC57Q8N9N7 239 aa18.06■□□□□ 0.48
SREBF1-213ENST00000485080 OR2T34Q8NGX1 318 aa18.06■□□□□ 0.48
SREBF1-213ENST00000485080 GANCQ8TET4 914 aa18.06■□□□□ 0.48
SREBF1-213ENST00000485080 UBE2Q2Q8WVN8 375 aa18.06■□□□□ 0.48
SREBF1-213ENST00000485080 PPP1R16AQ96I34 528 aa18.06■□□□□ 0.48
SREBF1-213ENST00000485080 TSGA13Q96PP4 275 aa18.06■□□□□ 0.48
SREBF1-213ENST00000485080 PSKH2Q96QS6 385 aa18.06■□□□□ 0.48
SREBF1-213ENST00000485080 HINFPQ9BQA5 517 aa18.06■□□□□ 0.48
SREBF1-213ENST00000485080 CPEB1Q9BZB8 566 aaKnown RBP18.06■□□□□ 0.48
SREBF1-213ENST00000485080 TM6SF2Q9BZW4 377 aa18.06■□□□□ 0.48
SREBF1-213ENST00000485080 SP110Q9HB58 689 aa18.06■□□□□ 0.48
SREBF1-213ENST00000485080 KLHL11Q9NVR0 708 aa18.06■□□□□ 0.48
SREBF1-213ENST00000485080 EVLQ9UI08 416 aaPredicted RBP18.06■□□□□ 0.48
SREBF1-213ENST00000485080 ADGRG1Q9Y653 693 aa18.06■□□□□ 0.48
SREBF1-213ENST00000485080 LRRD1A4D1F6 860 aa18.05■□□□□ 0.48
SREBF1-213ENST00000485080 LRRC72A6NJI9 287 aa18.05■□□□□ 0.48
SREBF1-213ENST00000485080 PLRG1O43660 514 aaKnown RBP18.05■□□□□ 0.48
SREBF1-213ENST00000485080 IGSF6O95976 241 aa18.05■□□□□ 0.48
SREBF1-213ENST00000485080 ITPKAP23677 461 aa18.05■□□□□ 0.48
SREBF1-213ENST00000485080 ITGB7P26010 798 aa18.05■□□□□ 0.48
SREBF1-213ENST00000485080 CCR5P51681 352 aa18.05■□□□□ 0.48
SREBF1-213ENST00000485080 METAP1P53582 386 aa18.05■□□□□ 0.48
SREBF1-213ENST00000485080 ADPRHP54922 357 aa18.05■□□□□ 0.48
SREBF1-213ENST00000485080 RHOAP61586 193 aa18.05■□□□□ 0.48
SREBF1-213ENST00000485080 RAD51Q06609 339 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms