RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 SLC1A5Q15758 541 aa16.96■□□□□ 0.31
CTSA-207ENST00000484855 MROH9Q5TGP6 573 aa16.96■□□□□ 0.31
CTSA-207ENST00000484855 HHATQ5VTY9 493 aa16.96■□□□□ 0.31
CTSA-207ENST00000484855 DENND5AQ6IQ26 1287 aa16.96■□□□□ 0.31
CTSA-207ENST00000484855 PACS1Q6VY07 963 aa16.96■□□□□ 0.31
CTSA-207ENST00000484855 PGBD5Q8N414 524 aa16.96■□□□□ 0.31
CTSA-207ENST00000484855 OR52K2Q8NGK3 314 aa16.96■□□□□ 0.31
CTSA-207ENST00000484855 TCP10LQ8TDR4 215 aa16.96■□□□□ 0.31
CTSA-207ENST00000484855 ZNF599Q96NL3 588 aa16.96■□□□□ 0.31
CTSA-207ENST00000484855 TGS1Q96RS0 853 aaKnown RBP16.96■□□□□ 0.31
CTSA-207ENST00000484855 NSRP1Q9H0G5 558 aaKnown RBP16.96■□□□□ 0.31
CTSA-207ENST00000484855 TXNDC16Q9P2K2 825 aa16.96■□□□□ 0.31
CTSA-207ENST00000484855 STOML2Q9UJZ1 356 aa16.96■□□□□ 0.31
CTSA-207ENST00000484855 IRAK3Q9Y616 596 aa16.96■□□□□ 0.31
CTSA-207ENST00000484855 HIDE1A8MVS5 230 aa16.96■□□□□ 0.31
CTSA-207ENST00000484855 EBAG9O00559 213 aa16.96■□□□□ 0.31
CTSA-207ENST00000484855 HOXD9P28356 352 aaPredicted RBP16.96■□□□□ 0.31
CTSA-207ENST00000484855 PCID2Q5JVF3 399 aa16.96■□□□□ 0.31
CTSA-207ENST00000484855 LVRNQ6Q4G3 990 aa16.96■□□□□ 0.31
CTSA-207ENST00000484855 SH2D5Q6ZV89 423 aa16.96■□□□□ 0.31
CTSA-207ENST00000484855 KDELC2Q7Z4H8 507 aa16.96■□□□□ 0.31
CTSA-207ENST00000484855 CCDC117Q8IWD4 279 aaPredicted RBP16.96■□□□□ 0.31
CTSA-207ENST00000484855 PPHLN1Q8NEY8 458 aaKnown RBP16.96■□□□□ 0.31
CTSA-207ENST00000484855 POF1BQ8WVV4 589 aa16.96■□□□□ 0.31
CTSA-207ENST00000484855 GCNAQ96QF7 691 aa16.96■□□□□ 0.31
CTSA-207ENST00000484855 SPON2Q9BUD6 331 aa16.96■□□□□ 0.31
CTSA-207ENST00000484855 KIFC1Q9BW19 673 aa16.96■□□□□ 0.31
CTSA-207ENST00000484855 ATXN3LQ9H3M9 355 aa16.96■□□□□ 0.31
CTSA-207ENST00000484855 ILVBLA1L0T0 632 aa16.95■□□□□ 0.3
CTSA-207ENST00000484855 C2orf71A6NGG8 1288 aa16.95■□□□□ 0.3
CTSA-207ENST00000484855 SCAMP3O14828 347 aaKnown RBP16.95■□□□□ 0.3
CTSA-207ENST00000484855 MMP2P08253 660 aa16.95■□□□□ 0.3
CTSA-207ENST00000484855 NMBRP28336 390 aa16.95■□□□□ 0.3
CTSA-207ENST00000484855 OXCT1P55809 520 aa16.95■□□□□ 0.3
CTSA-207ENST00000484855 RANBP10Q6VN20 620 aa16.95■□□□□ 0.3
CTSA-207ENST00000484855 SETD3Q86TU7 594 aaPredicted RBP16.95■□□□□ 0.3
CTSA-207ENST00000484855 KCNMB4Q86W47 210 aa16.95■□□□□ 0.3
CTSA-207ENST00000484855 ADAMTS19Q8TE59 1207 aa16.95■□□□□ 0.3
CTSA-207ENST00000484855 LRRC3Q9BY71 257 aa16.95■□□□□ 0.3
CTSA-207ENST00000484855 POLR1EQ9GZS1 481 aaKnown RBP16.95■□□□□ 0.3
CTSA-207ENST00000484855 TLR9Q9NR96 1032 aa16.95■□□□□ 0.3
CTSA-207ENST00000484855 PSAT1Q9Y617 370 aa16.95■□□□□ 0.3
CTSA-207ENST00000484855 DOCK6Q96HP0 2047 aa16.95■□□□□ 0.3
CTSA-207ENST00000484855 HMX2A2RU54 273 aa16.95■□□□□ 0.3
CTSA-207ENST00000484855 COPEO14579 308 aa16.95■□□□□ 0.3
CTSA-207ENST00000484855 RFPL1O75677 317 aa16.95■□□□□ 0.3
CTSA-207ENST00000484855 CKMP06732 381 aa16.95■□□□□ 0.3
CTSA-207ENST00000484855 CDC25CP30307 473 aa16.95■□□□□ 0.3
CTSA-207ENST00000484855 NEK3P51956 506 aa16.95■□□□□ 0.3
CTSA-207ENST00000484855 GKAP1Q5VSY0 366 aaPredicted RBP16.95■□□□□ 0.3
CTSA-207ENST00000484855 PKN3Q6P5Z2 889 aa16.95■□□□□ 0.3
CTSA-207ENST00000484855 POTEHQ6S545 545 aa16.95■□□□□ 0.3
CTSA-207ENST00000484855 BBS5Q8N3I7 341 aa16.95■□□□□ 0.3
CTSA-207ENST00000484855 MAB21L3Q8N8X9 362 aa16.95■□□□□ 0.3
CTSA-207ENST00000484855 CPNE1Q99829 537 aa16.95■□□□□ 0.3
CTSA-207ENST00000484855 MTIF3Q9H2K0 278 aaKnown RBP16.95■□□□□ 0.3
CTSA-207ENST00000484855 C20orf96Q9NUD7 363 aaPredicted RBP16.95■□□□□ 0.3
CTSA-207ENST00000484855 SLC17A7Q9P2U7 560 aa16.95■□□□□ 0.3
CTSA-207ENST00000484855 GRID1Q9ULK0 1009 aa16.95■□□□□ 0.3
CTSA-207ENST00000484855 RWDD3Q9Y3V2 267 aa16.95■□□□□ 0.3
CTSA-207ENST00000484855 GBF1Q92538 1859 aa16.95■□□□□ 0.3
CTSA-207ENST00000484855 CCDC78A2IDD5 438 aa16.94■□□□□ 0.3
CTSA-207ENST00000484855 LINC01553A4QN01 128 aa16.94■□□□□ 0.3
CTSA-207ENST00000484855 CCL16O15467 120 aa16.94■□□□□ 0.3
CTSA-207ENST00000484855 DNAJB1P25685 340 aa16.94■□□□□ 0.3
CTSA-207ENST00000484855 GP5P40197 560 aa16.94■□□□□ 0.3
CTSA-207ENST00000484855 CCNFP41002 786 aa16.94■□□□□ 0.3
CTSA-207ENST00000484855 CHRNA4P43681 627 aa16.94■□□□□ 0.3
CTSA-207ENST00000484855 ZXDBP98169 803 aa16.94■□□□□ 0.3
CTSA-207ENST00000484855 PPM1LQ5SGD2 360 aa16.94■□□□□ 0.3
CTSA-207ENST00000484855 MRPL43Q8N983 215 aaKnown RBP16.94■□□□□ 0.3
CTSA-207ENST00000484855 TTC16Q8NEE8 873 aa16.94■□□□□ 0.3
CTSA-207ENST00000484855 ARRDC2Q8TBH0 407 aa16.94■□□□□ 0.3
CTSA-207ENST00000484855 SPPL3Q8TCT6 385 aa16.94■□□□□ 0.3
CTSA-207ENST00000484855 SLC22A17Q8WUG5 538 aa16.94■□□□□ 0.3
CTSA-207ENST00000484855 PTCD2Q8WV60 388 aaKnown RBP16.94■□□□□ 0.3
CTSA-207ENST00000484855 CORO1BQ9BR76 489 aa16.94■□□□□ 0.3
CTSA-207ENST00000484855 IQCGQ9H095 443 aaKnown RBP16.94■□□□□ 0.3
CTSA-207ENST00000484855 ATP13A1Q9HD20 1204 aa16.94■□□□□ 0.3
CTSA-207ENST00000484855 ASAH2Q9NR71 780 aa16.94■□□□□ 0.3
CTSA-207ENST00000484855 HAUS2Q9NVX0 235 aa16.94■□□□□ 0.3
CTSA-207ENST00000484855 LSM7Q9UK45 103 aaKnown RBP16.94■□□□□ 0.3
CTSA-207ENST00000484855 TBC1D30Q9Y2I9 924 aa16.94■□□□□ 0.3
CTSA-207ENST00000484855 TCAF1Q9Y4C2 921 aa16.94■□□□□ 0.3
CTSA-207ENST00000484855 A0A1W2PRU2 124 aa16.94■□□□□ 0.3
CTSA-207ENST00000484855 TTC24A2A3L6 582 aaPredicted RBP16.94■□□□□ 0.3
CTSA-207ENST00000484855 TYW5A2RUC4 315 aaKnown RBP16.94■□□□□ 0.3
CTSA-207ENST00000484855 KDELR3O43731 214 aa16.94■□□□□ 0.3
CTSA-207ENST00000484855 GREM1O60565 184 aa16.94■□□□□ 0.3
CTSA-207ENST00000484855 TBL1XO60907 577 aa16.94■□□□□ 0.3
CTSA-207ENST00000484855 MYL4P12829 197 aa16.94■□□□□ 0.3
CTSA-207ENST00000484855 ADRA1DP25100 572 aa16.94■□□□□ 0.3
CTSA-207ENST00000484855 FOXN2P32314 431 aa16.94■□□□□ 0.3
CTSA-207ENST00000484855 HSP90AA5PQ58FG0 334 aa16.94■□□□□ 0.3
CTSA-207ENST00000484855 Q6ZNB5 142 aa16.94■□□□□ 0.3
CTSA-207ENST00000484855 TIFABQ6ZNK6 161 aa16.94■□□□□ 0.3
CTSA-207ENST00000484855 CNPY4Q8N129 248 aa16.94■□□□□ 0.3
CTSA-207ENST00000484855 SLC25A41Q8N5S1 370 aa16.94■□□□□ 0.3
CTSA-207ENST00000484855 HJURPQ8NCD3 748 aaPredicted RBP16.94■□□□□ 0.3
CTSA-207ENST00000484855 ZNF778Q96MU6 729 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms