RNA–Protein interactions for RNA: ENST00000484520.1

SPTA1-206, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-206ENST00000484520 TMEM86AQ8N2M4 240 aa4.52□□□□□ -1.69
SPTA1-206ENST00000484520 TMEM35BQ8NCS4 154 aa4.52□□□□□ -1.69
SPTA1-206ENST00000484520 PIK3C3Q8NEB9 887 aa4.52□□□□□ -1.69
SPTA1-206ENST00000484520 MNS1Q8NEH6 495 aa4.52□□□□□ -1.69
SPTA1-206ENST00000484520 RFFLQ8WZ73 363 aa4.52□□□□□ -1.69
SPTA1-206ENST00000484520 LINC00476Q8WZB0 136 aa4.52□□□□□ -1.69
SPTA1-206ENST00000484520 SEMA4DQ92854 862 aa4.52□□□□□ -1.69
SPTA1-206ENST00000484520 HPDLQ96IR7 371 aa4.52□□□□□ -1.69
SPTA1-206ENST00000484520 CPB2Q96IY4 423 aa4.52□□□□□ -1.69
SPTA1-206ENST00000484520 ZNF333Q96JL9 665 aa4.52□□□□□ -1.69
SPTA1-206ENST00000484520 TNIP3Q96KP6 325 aa4.52□□□□□ -1.69
SPTA1-206ENST00000484520 C16orf45Q96MC5 204 aaPredicted RBP4.52□□□□□ -1.69
SPTA1-206ENST00000484520 DEFB118Q96PH6 123 aa4.52□□□□□ -1.69
SPTA1-206ENST00000484520 DEPDC7Q96QD5 511 aa4.52□□□□□ -1.69
SPTA1-206ENST00000484520 DCLRE1CQ96SD1 692 aaKnown RBP4.52□□□□□ -1.69
SPTA1-206ENST00000484520 CHP1Q99653 195 aa4.52□□□□□ -1.69
SPTA1-206ENST00000484520 AGPAT1Q99943 283 aa4.52□□□□□ -1.69
SPTA1-206ENST00000484520 NCAPGQ9BPX3 1015 aa4.52□□□□□ -1.69
SPTA1-206ENST00000484520 SYT11Q9BT88 431 aa4.52□□□□□ -1.69
SPTA1-206ENST00000484520 MRPL9Q9BYD2 267 aaKnown RBP4.52□□□□□ -1.69
SPTA1-206ENST00000484520 GPR88Q9GZN0 384 aa4.52□□□□□ -1.69
SPTA1-206ENST00000484520 LHX5Q9H2C1 402 aa4.52□□□□□ -1.69
SPTA1-206ENST00000484520 PDCL3Q9H2J4 239 aa4.52□□□□□ -1.69
SPTA1-206ENST00000484520 RGS18Q9NS28 235 aa4.52□□□□□ -1.69
SPTA1-206ENST00000484520 TRMT1Q9NXH9 659 aaKnown RBP4.52□□□□□ -1.69
SPTA1-206ENST00000484520 GDAP2Q9NXN4 497 aa4.52□□□□□ -1.69
SPTA1-206ENST00000484520 SAMD15Q9P1V8 674 aa4.52□□□□□ -1.69
SPTA1-206ENST00000484520 DKK2Q9UBU2 259 aa4.52□□□□□ -1.69
SPTA1-206ENST00000484520 NOCTQ9UK39 431 aaKnown RBP4.52□□□□□ -1.69
SPTA1-206ENST00000484520 PADI3Q9ULW8 664 aa4.52□□□□□ -1.69
SPTA1-206ENST00000484520 BARX2Q9UMQ3 279 aaPredicted RBP4.52□□□□□ -1.69
SPTA1-206ENST00000484520 ST3GAL5Q9UNP4 418 aa4.52□□□□□ -1.69
SPTA1-206ENST00000484520 NOC2LQ9Y3T9 749 aaKnown RBP4.52□□□□□ -1.69
SPTA1-206ENST00000484520 IPPQ9Y573 584 aa4.52□□□□□ -1.69
SPTA1-206ENST00000484520 SCINQ9Y6U3 715 aa4.52□□□□□ -1.69
SPTA1-206ENST00000484520 HTTP42858 3142 aa4.52□□□□□ -1.69
SPTA1-206ENST00000484520 GRIN2DO15399 1336 aa4.51□□□□□ -1.69
SPTA1-206ENST00000484520 A0A087X0T9 212 aa4.51□□□□□ -1.69
SPTA1-206ENST00000484520 SMIM28A0A1B0GU29 152 aa4.51□□□□□ -1.69
SPTA1-206ENST00000484520 MIF4GDA9UHW6 222 aaKnown RBP4.51□□□□□ -1.69
SPTA1-206ENST00000484520 FOXN3O00409 490 aaPredicted RBP4.51□□□□□ -1.69
SPTA1-206ENST00000484520 TRAPPC3O43617 180 aa4.51□□□□□ -1.69
SPTA1-206ENST00000484520 OPHN1O60890 802 aa4.51□□□□□ -1.69
SPTA1-206ENST00000484520 HUS1O60921 280 aa4.51□□□□□ -1.69
SPTA1-206ENST00000484520 MTA2O94776 668 aa4.51□□□□□ -1.69
SPTA1-206ENST00000484520 SGPL1O95470 568 aa4.51□□□□□ -1.69
SPTA1-206ENST00000484520 VNN1O95497 513 aa4.51□□□□□ -1.69
SPTA1-206ENST00000484520 TFRCP02786 760 aaKnown RBP4.51□□□□□ -1.69
SPTA1-206ENST00000484520 CALB1P05937 261 aa4.51□□□□□ -1.69
SPTA1-206ENST00000484520 THP07101 528 aa4.51□□□□□ -1.69
SPTA1-206ENST00000484520 FAM228BP0C875 321 aa4.51□□□□□ -1.69
SPTA1-206ENST00000484520 SETSIPP0DME0 302 aa4.51□□□□□ -1.69
SPTA1-206ENST00000484520 HKR1P10072 659 aa4.51□□□□□ -1.69
SPTA1-206ENST00000484520 VDRP11473 427 aa4.51□□□□□ -1.69
SPTA1-206ENST00000484520 TCP1P17987 556 aaKnown RBP4.51□□□□□ -1.69
SPTA1-206ENST00000484520 PCSK1P29120 753 aa4.51□□□□□ -1.69
SPTA1-206ENST00000484520 GTF2F1P35269 517 aaKnown RBP eCLIP4.51□□□□□ -1.69
SPTA1-206ENST00000484520 ARHGAP25P42331 645 aa4.51□□□□□ -1.69
SPTA1-206ENST00000484520 SLC1A1P43005 524 aa4.51□□□□□ -1.69
SPTA1-206ENST00000484520 LHX1P48742 406 aa4.51□□□□□ -1.69
SPTA1-206ENST00000484520 TAF6P49848 677 aa4.51□□□□□ -1.69
SPTA1-206ENST00000484520 NAP1L1P55209 391 aaKnown RBP4.51□□□□□ -1.69
SPTA1-206ENST00000484520 GSCP56915 257 aaPredicted RBP4.51□□□□□ -1.69
SPTA1-206ENST00000484520 RNASE9P60153 205 aaKnown RBP4.51□□□□□ -1.69
SPTA1-206ENST00000484520 MYL6P60660 151 aa4.51□□□□□ -1.69
SPTA1-206ENST00000484520 OSTNP61366 133 aa4.51□□□□□ -1.69
SPTA1-206ENST00000484520 GPC5P78333 572 aa4.51□□□□□ -1.69
SPTA1-206ENST00000484520 GFPT1Q06210 699 aaPredicted RBP4.51□□□□□ -1.69
SPTA1-206ENST00000484520 ELAVL2Q12926 359 aaKnown RBP4.51□□□□□ -1.69
SPTA1-206ENST00000484520 LPIN1Q14693 890 aa4.51□□□□□ -1.69
SPTA1-206ENST00000484520 MAPRE1Q15691 268 aaKnown RBP4.51□□□□□ -1.69
SPTA1-206ENST00000484520 WHAMMP3Q1A5X7 153 aa4.51□□□□□ -1.69
SPTA1-206ENST00000484520 ERCC6LQ2NKX8 1250 aa4.51□□□□□ -1.69
SPTA1-206ENST00000484520 BEAN1Q3B7T3 259 aa4.51□□□□□ -1.69
SPTA1-206ENST00000484520 ZBTB41Q5SVQ8 909 aa4.51□□□□□ -1.69
SPTA1-206ENST00000484520 C9orf57Q5W0N0 161 aa4.51□□□□□ -1.69
SPTA1-206ENST00000484520 SP5Q6BEB4 398 aaPredicted RBP4.51□□□□□ -1.69
SPTA1-206ENST00000484520 CCDC70Q6NSX1 233 aa4.51□□□□□ -1.69
SPTA1-206ENST00000484520 TMEM270Q6UE05 265 aa4.51□□□□□ -1.69
SPTA1-206ENST00000484520 ZNF571Q7Z3V5 609 aaPredicted RBP4.51□□□□□ -1.69
SPTA1-206ENST00000484520 XYLT1Q86Y38 959 aa4.51□□□□□ -1.69
SPTA1-206ENST00000484520 ZDHHC17Q8IUH5 632 aa4.51□□□□□ -1.69
SPTA1-206ENST00000484520 PHYKPLQ8IUZ5 450 aa4.51□□□□□ -1.69
SPTA1-206ENST00000484520 EFCAB13Q8IY85 973 aa4.51□□□□□ -1.69
SPTA1-206ENST00000484520 CEP112Q8N8E3 955 aa4.51□□□□□ -1.69
SPTA1-206ENST00000484520 SIMC1Q8NDZ2 872 aa4.51□□□□□ -1.69
SPTA1-206ENST00000484520 ACRBPQ8NEB7 543 aa4.51□□□□□ -1.69
SPTA1-206ENST00000484520 APPL2Q8NEU8 664 aa4.51□□□□□ -1.69
SPTA1-206ENST00000484520 OR5B17Q8NGF7 314 aa4.51□□□□□ -1.69
SPTA1-206ENST00000484520 SLC30A5Q8TAD4 765 aa4.51□□□□□ -1.69
SPTA1-206ENST00000484520 SH3TC2Q8TF17 1288 aa4.51□□□□□ -1.69
SPTA1-206ENST00000484520 COQ10AQ96MF6 247 aa4.51□□□□□ -1.69
SPTA1-206ENST00000484520 NAP1L3Q99457 506 aaPredicted RBP4.51□□□□□ -1.69
SPTA1-206ENST00000484520 NAPGQ99747 312 aaPredicted RBP4.51□□□□□ -1.69
SPTA1-206ENST00000484520 DESI2Q9BSY9 194 aa4.51□□□□□ -1.69
SPTA1-206ENST00000484520 TRIM62Q9BVG3 475 aa4.51□□□□□ -1.69
SPTA1-206ENST00000484520 ISCUQ9H1K1 167 aa4.51□□□□□ -1.69
SPTA1-206ENST00000484520 NXF3Q9H4D5 531 aaKnown RBP4.51□□□□□ -1.69
SPTA1-206ENST00000484520 LZTFL1Q9NQ48 299 aa4.51□□□□□ -1.69
SPTA1-206ENST00000484520 CISHQ9NSE2 258 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms