RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 NFKBIBQ15653 356 aa13.14□□□□□ -0.31
HDAC1-209ENST00000484305 IL27RAQ6UWB1 636 aa13.14□□□□□ -0.31
HDAC1-209ENST00000484305 VPS36Q86VN1 386 aa13.14□□□□□ -0.31
HDAC1-209ENST00000484305 ZNF354CQ86Y25 554 aa13.14□□□□□ -0.31
HDAC1-209ENST00000484305 UMODL1-AS1Q8N2C9 162 aa13.14□□□□□ -0.31
HDAC1-209ENST00000484305 RNF214Q8ND24 703 aa13.14□□□□□ -0.31
HDAC1-209ENST00000484305 ISG20Q96AZ6 181 aaKnown RBP13.14□□□□□ -0.31
HDAC1-209ENST00000484305 HMCESQ96FZ2 354 aa13.14□□□□□ -0.31
HDAC1-209ENST00000484305 CAMK1GQ96NX5 476 aa13.14□□□□□ -0.31
HDAC1-209ENST00000484305 KCTD15Q96SI1 283 aaPredicted RBP13.14□□□□□ -0.31
HDAC1-209ENST00000484305 HEPHQ9BQS7 1158 aa13.14□□□□□ -0.31
HDAC1-209ENST00000484305 THAP2Q9H0W7 228 aa13.14□□□□□ -0.31
HDAC1-209ENST00000484305 SLC32A1Q9H598 525 aa13.14□□□□□ -0.31
HDAC1-209ENST00000484305 CATSPERBQ9H7T0 1116 aa13.14□□□□□ -0.31
HDAC1-209ENST00000484305 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.14□□□□□ -0.31
HDAC1-209ENST00000484305 TRPM6Q9BX84 2022 aa13.13□□□□□ -0.31
HDAC1-209ENST00000484305 EEF2KO00418 725 aaKnown RBP13.13□□□□□ -0.31
HDAC1-209ENST00000484305 FGF10O15520 208 aaPredicted RBP13.13□□□□□ -0.31
HDAC1-209ENST00000484305 BUB1O43683 1085 aa13.13□□□□□ -0.31
HDAC1-209ENST00000484305 SH3BP5O60239 455 aa13.13□□□□□ -0.31
HDAC1-209ENST00000484305 TCF4P15884 667 aa13.13□□□□□ -0.31
HDAC1-209ENST00000484305 PMLP29590 882 aa13.13□□□□□ -0.31
HDAC1-209ENST00000484305 HNRNPH3P31942 346 aaKnown RBP13.13□□□□□ -0.31
HDAC1-209ENST00000484305 GKP32189 559 aa13.13□□□□□ -0.31
HDAC1-209ENST00000484305 HTR7P34969 479 aa13.13□□□□□ -0.31
HDAC1-209ENST00000484305 GEMIN4P57678 1058 aaKnown RBP13.13□□□□□ -0.31
HDAC1-209ENST00000484305 YBEYP58557 167 aaPredicted RBP13.13□□□□□ -0.31
HDAC1-209ENST00000484305 FAM193AP78312 1265 aa13.13□□□□□ -0.31
HDAC1-209ENST00000484305 SERINC3Q13530 473 aa13.13□□□□□ -0.31
HDAC1-209ENST00000484305 ALKBH5Q6P6C2 394 aaKnown RBP13.13□□□□□ -0.31
HDAC1-209ENST00000484305 ERN2Q76MJ5 926 aaKnown RBP13.13□□□□□ -0.31
HDAC1-209ENST00000484305 ADAT2Q7Z6V5 191 aaKnown RBP13.13□□□□□ -0.31
HDAC1-209ENST00000484305 TRIM69Q86WT6 500 aa13.13□□□□□ -0.31
HDAC1-209ENST00000484305 PLPP6Q8IY26 295 aa13.13□□□□□ -0.31
HDAC1-209ENST00000484305 NETO2Q8NC67 525 aa13.13□□□□□ -0.31
HDAC1-209ENST00000484305 OR6K2Q8NGY2 324 aa13.13□□□□□ -0.31
HDAC1-209ENST00000484305 VOPP1Q96AW1 172 aa13.13□□□□□ -0.31
HDAC1-209ENST00000484305 SERAC1Q96JX3 654 aa13.13□□□□□ -0.31
HDAC1-209ENST00000484305 HDAC8Q9BY41 377 aa13.13□□□□□ -0.31
HDAC1-209ENST00000484305 ZDHHC6Q9H6R6 413 aa13.13□□□□□ -0.31
HDAC1-209ENST00000484305 DYRK4Q9NR20 520 aa13.13□□□□□ -0.31
HDAC1-209ENST00000484305 AASDHPPTQ9NRN7 309 aa13.13□□□□□ -0.31
HDAC1-209ENST00000484305 TM7SF3Q9NS93 570 aa13.13□□□□□ -0.31
HDAC1-209ENST00000484305 HECAQ9UBI9 543 aaPredicted RBP13.13□□□□□ -0.31
HDAC1-209ENST00000484305 SPAARA0A1B0GVQ0 90 aa13.12□□□□□ -0.31
HDAC1-209ENST00000484305 A0A1W2PR77 199 aa13.12□□□□□ -0.31
HDAC1-209ENST00000484305 EIF3CLB5ME19 914 aaKnown RBP13.12□□□□□ -0.31
HDAC1-209ENST00000484305 VILLO15195 856 aa13.12□□□□□ -0.31
HDAC1-209ENST00000484305 CBFA2T2O43439 604 aa13.12□□□□□ -0.31
HDAC1-209ENST00000484305 RNGTTO60942 597 aaKnown RBP13.12□□□□□ -0.31
HDAC1-209ENST00000484305 TMCC1O94876 653 aa13.12□□□□□ -0.31
HDAC1-209ENST00000484305 GSRP00390 522 aa13.12□□□□□ -0.31
HDAC1-209ENST00000484305 CYP1A2P05177 515 aa13.12□□□□□ -0.31
HDAC1-209ENST00000484305 ZNF883P0CG24 379 aa13.12□□□□□ -0.31
HDAC1-209ENST00000484305 IL1R2P27930 398 aa13.12□□□□□ -0.31
HDAC1-209ENST00000484305 CD38P28907 300 aa13.12□□□□□ -0.31
HDAC1-209ENST00000484305 EIF4A3P38919 411 aaKnown RBP13.12□□□□□ -0.31
HDAC1-209ENST00000484305 CTSKP43235 329 aa13.12□□□□□ -0.31
HDAC1-209ENST00000484305 C21orf59P57076 290 aa13.12□□□□□ -0.31
HDAC1-209ENST00000484305 PARP15Q460N3 678 aa13.12□□□□□ -0.31
HDAC1-209ENST00000484305 PPP6R3Q5H9R7 873 aaPredicted RBP13.12□□□□□ -0.31
HDAC1-209ENST00000484305 CCDC122Q5T0U0 273 aa13.12□□□□□ -0.31
HDAC1-209ENST00000484305 ATXN7L2Q5T6C5 722 aaPredicted RBP13.12□□□□□ -0.31
HDAC1-209ENST00000484305 SPECC1LQ69YQ0 1117 aa13.12□□□□□ -0.31
HDAC1-209ENST00000484305 RFX8Q6ZV50 586 aa13.12□□□□□ -0.31
HDAC1-209ENST00000484305 PRPF39Q86UA1 669 aaKnown RBP13.12□□□□□ -0.31
HDAC1-209ENST00000484305 VSTM4Q8IW00 320 aa13.12□□□□□ -0.31
HDAC1-209ENST00000484305 NAXDQ8IW45 347 aa13.12□□□□□ -0.31
HDAC1-209ENST00000484305 RYBPQ8N488 228 aaPredicted RBP13.12□□□□□ -0.31
HDAC1-209ENST00000484305 OR2AP1Q8NGE2 309 aa13.12□□□□□ -0.31
HDAC1-209ENST00000484305 ARHGEF26Q96DR7 871 aa13.12□□□□□ -0.31
HDAC1-209ENST00000484305 PPP1R16AQ96I34 528 aa13.12□□□□□ -0.31
HDAC1-209ENST00000484305 CELF6Q96J87 481 aaKnown RBP13.12□□□□□ -0.31
HDAC1-209ENST00000484305 BTBD6Q96KE9 485 aa13.12□□□□□ -0.31
HDAC1-209ENST00000484305 EIF3CQ99613 913 aaKnown RBP13.12□□□□□ -0.31
HDAC1-209ENST00000484305 DNAJC7Q99615 494 aa13.12□□□□□ -0.31
HDAC1-209ENST00000484305 NUP85Q9BW27 656 aa13.12□□□□□ -0.31
HDAC1-209ENST00000484305 PREBQ9HCU5 417 aa13.12□□□□□ -0.31
HDAC1-209ENST00000484305 TPX2Q9ULW0 747 aaKnown RBP13.12□□□□□ -0.31
HDAC1-209ENST00000484305 NENFQ9UMX5 172 aa13.12□□□□□ -0.31
HDAC1-209ENST00000484305 A0A1W2PQU0 124 aa13.11□□□□□ -0.31
HDAC1-209ENST00000484305 ZSCAN5CA6NGD5 496 aaPredicted RBP13.11□□□□□ -0.31
HDAC1-209ENST00000484305 H0Y8X5 98 aa13.11□□□□□ -0.31
HDAC1-209ENST00000484305 KRIT1O00522 736 aa13.11□□□□□ -0.31
HDAC1-209ENST00000484305 DAPK3O43293 454 aa13.11□□□□□ -0.31
HDAC1-209ENST00000484305 ADRB3P13945 408 aa13.11□□□□□ -0.31
HDAC1-209ENST00000484305 ERCC2P18074 760 aa13.11□□□□□ -0.31
HDAC1-209ENST00000484305 ITGB7P26010 798 aa13.11□□□□□ -0.31
HDAC1-209ENST00000484305 PCK1P35558 622 aa13.11□□□□□ -0.31
HDAC1-209ENST00000484305 NEK3P51956 506 aa13.11□□□□□ -0.31
HDAC1-209ENST00000484305 SNRPD1P62314 119 aaKnown RBP13.11□□□□□ -0.31
HDAC1-209ENST00000484305 SIM1P81133 766 aaPredicted RBP13.11□□□□□ -0.31
HDAC1-209ENST00000484305 CCDC15Q0P6D6 951 aa13.11□□□□□ -0.31
HDAC1-209ENST00000484305 ACAP1Q15027 740 aa13.11□□□□□ -0.31
HDAC1-209ENST00000484305 ZNF423Q2M1K9 1284 aa13.11□□□□□ -0.31
HDAC1-209ENST00000484305 MYLK3Q32MK0 819 aa13.11□□□□□ -0.31
HDAC1-209ENST00000484305 INO80DQ53TQ3 878 aaPredicted RBP13.11□□□□□ -0.31
HDAC1-209ENST00000484305 PRAMEF14Q5SWL7 426 aa13.11□□□□□ -0.31
HDAC1-209ENST00000484305 NAPEPLDQ6IQ20 393 aa13.11□□□□□ -0.31
HDAC1-209ENST00000484305 DBX2Q6ZNG2 339 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms