RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 HES6Q96HZ4 224 aa4.57□□□□□ -1.68
SCAF11-207ENST00000484275 TXNDC15Q96J42 360 aa4.57□□□□□ -1.68
SCAF11-207ENST00000484275 PIGSQ96S52 555 aa4.57□□□□□ -1.68
SCAF11-207ENST00000484275 NPFFR1Q9GZQ6 430 aa4.57□□□□□ -1.68
SCAF11-207ENST00000484275 ELAC1Q9H777 363 aaKnown RBP4.57□□□□□ -1.68
SCAF11-207ENST00000484275 CLK4Q9HAZ1 481 aaKnown RBP4.57□□□□□ -1.68
SCAF11-207ENST00000484275 C19orf53Q9UNZ5 99 aaPredicted RBP4.57□□□□□ -1.68
SCAF11-207ENST00000484275 SLC45A1Q9Y2W3 748 aa4.57□□□□□ -1.68
SCAF11-207ENST00000484275 KIF26BQ2KJY2 2108 aa4.57□□□□□ -1.68
SCAF11-207ENST00000484275 KDM4EB2RXH2 506 aaPredicted RBP4.56□□□□□ -1.68
SCAF11-207ENST00000484275 NPIPB11E5RHQ5 1161 aa4.56□□□□□ -1.68
SCAF11-207ENST00000484275 ACTL6BO94805 426 aa4.56□□□□□ -1.68
SCAF11-207ENST00000484275 CGAP01215 116 aa4.56□□□□□ -1.68
SCAF11-207ENST00000484275 MMP3P08254 477 aa4.56□□□□□ -1.68
SCAF11-207ENST00000484275 CHN1P15882 459 aa4.56□□□□□ -1.68
SCAF11-207ENST00000484275 GALNT1Q10472 559 aaPredicted RBP4.56□□□□□ -1.68
SCAF11-207ENST00000484275 MYBPHQ13203 477 aa4.56□□□□□ -1.68
SCAF11-207ENST00000484275 SNTA1Q13424 505 aa4.56□□□□□ -1.68
SCAF11-207ENST00000484275 SETMARQ53H47 684 aaPredicted RBP4.56□□□□□ -1.68
SCAF11-207ENST00000484275 EFHC1Q5JVL4 640 aa4.56□□□□□ -1.68
SCAF11-207ENST00000484275 RASGRP2Q7LDG7 609 aa4.56□□□□□ -1.68
SCAF11-207ENST00000484275 GALNT7Q86SF2 657 aa4.56□□□□□ -1.68
SCAF11-207ENST00000484275 SLC44A2Q8IWA5 706 aaPredicted RBP4.56□□□□□ -1.68
SCAF11-207ENST00000484275 BRSK2Q8IWQ3 736 aa4.56□□□□□ -1.68
SCAF11-207ENST00000484275 WBP1Q96G27 269 aa4.56□□□□□ -1.68
SCAF11-207ENST00000484275 PABPC3Q9H361 631 aaKnown RBP4.56□□□□□ -1.68
SCAF11-207ENST00000484275 IGLV5-37A0A075B6J1 123 aa4.55□□□□□ -1.68
SCAF11-207ENST00000484275 FAM90A20PA6NIJ5 464 aa4.55□□□□□ -1.68
SCAF11-207ENST00000484275 TULP2O00295 520 aa4.55□□□□□ -1.68
SCAF11-207ENST00000484275 SYN3O14994 580 aa4.55□□□□□ -1.68
SCAF11-207ENST00000484275 FFAR2O15552 330 aa4.55□□□□□ -1.68
SCAF11-207ENST00000484275 ITGA2BP08514 1039 aa4.55□□□□□ -1.68
SCAF11-207ENST00000484275 CKMT1AP12532 417 aa4.55□□□□□ -1.68
SCAF11-207ENST00000484275 CYP4B1P13584 511 aa4.55□□□□□ -1.68
SCAF11-207ENST00000484275 ACP5P13686 325 aa4.55□□□□□ -1.68
SCAF11-207ENST00000484275 ARSAP15289 507 aa4.55□□□□□ -1.68
SCAF11-207ENST00000484275 SERPINA4P29622 427 aa4.55□□□□□ -1.68
SCAF11-207ENST00000484275 DCTDP32321 178 aa4.55□□□□□ -1.68
SCAF11-207ENST00000484275 KRTAP10-12P60413 245 aa4.55□□□□□ -1.68
SCAF11-207ENST00000484275 HLTFQ14527 1009 aaKnown RBP eCLIP4.55□□□□□ -1.68
SCAF11-207ENST00000484275 TMEM268Q5VZI3 342 aa4.55□□□□□ -1.68
SCAF11-207ENST00000484275 ZNF449Q6P9G9 518 aa4.55□□□□□ -1.68
SCAF11-207ENST00000484275 RAB11FIP2Q7L804 512 aa4.55□□□□□ -1.68
SCAF11-207ENST00000484275 PGBD5Q8N414 524 aa4.55□□□□□ -1.68
SCAF11-207ENST00000484275 IL17FQ96PD4 163 aa4.55□□□□□ -1.68
SCAF11-207ENST00000484275 TEFMQ96QE5 360 aaKnown RBP4.55□□□□□ -1.68
SCAF11-207ENST00000484275 MALT1Q9UDY8 824 aa4.55□□□□□ -1.68
SCAF11-207ENST00000484275 SAA2-SAA4A0A096LPE2 208 aa4.54□□□□□ -1.68
SCAF11-207ENST00000484275 A0A0U1RQJ8 604 aa4.54□□□□□ -1.68
SCAF11-207ENST00000484275 A0A1B0GVM2 712 aa4.54□□□□□ -1.68
SCAF11-207ENST00000484275 PRAC2D3DTV9 90 aa4.54□□□□□ -1.68
SCAF11-207ENST00000484275 TIMM23O14925 209 aa4.54□□□□□ -1.68
SCAF11-207ENST00000484275 PDIA3P30101 505 aaKnown RBP4.54□□□□□ -1.68
SCAF11-207ENST00000484275 AP2B1P63010 937 aa4.54□□□□□ -1.68
SCAF11-207ENST00000484275 ADORA2A-AS1P86434 159 aa4.54□□□□□ -1.68
SCAF11-207ENST00000484275 ARL16Q0P5N6 197 aa4.54□□□□□ -1.68
SCAF11-207ENST00000484275 RBM39Q14498 530 aaKnown RBP4.54□□□□□ -1.68
SCAF11-207ENST00000484275 RPS6KA2Q15349 733 aa4.54□□□□□ -1.68
SCAF11-207ENST00000484275 PFKFB4Q16877 469 aa4.54□□□□□ -1.68
SCAF11-207ENST00000484275 CCDC181Q5TID7 509 aa4.54□□□□□ -1.68
SCAF11-207ENST00000484275 DGAT2L7PQ6IED9 249 aa4.54□□□□□ -1.68
SCAF11-207ENST00000484275 AADACL2Q6P093 401 aa4.54□□□□□ -1.68
SCAF11-207ENST00000484275 XRRA1Q6P2D8 792 aa4.54□□□□□ -1.68
SCAF11-207ENST00000484275 RHBDF2Q6PJF5 856 aa4.54□□□□□ -1.68
SCAF11-207ENST00000484275 SYNE3Q6ZMZ3 975 aa4.54□□□□□ -1.68
SCAF11-207ENST00000484275 PATL1Q86TB9 770 aaKnown RBP4.54□□□□□ -1.68
SCAF11-207ENST00000484275 PTGR2Q8N8N7 351 aaPredicted RBP4.54□□□□□ -1.68
SCAF11-207ENST00000484275 HERC2P3Q9BVR0 1158 aa4.54□□□□□ -1.68
SCAF11-207ENST00000484275 CXorf56Q9H5V9 222 aa4.54□□□□□ -1.68
SCAF11-207ENST00000484275 KCND3Q9UK17 655 aa4.54□□□□□ -1.68
SCAF11-207ENST00000484275 J3KR12 359 aa4.53□□□□□ -1.68
SCAF11-207ENST00000484275 HNRNPRO43390 633 aaKnown RBP4.53□□□□□ -1.68
SCAF11-207ENST00000484275 RPS6KA3P51812 740 aa4.53□□□□□ -1.68
SCAF11-207ENST00000484275 CYP4A11Q02928 519 aa4.53□□□□□ -1.68
SCAF11-207ENST00000484275 DDR1Q08345 913 aa4.53□□□□□ -1.68
SCAF11-207ENST00000484275 DLG1Q12959 904 aa4.53□□□□□ -1.68
SCAF11-207ENST00000484275 PDCLQ13371 301 aa4.53□□□□□ -1.68
SCAF11-207ENST00000484275 PICALMQ13492 652 aa4.53□□□□□ -1.68
SCAF11-207ENST00000484275 XKR9Q5GH70 373 aa4.53□□□□□ -1.68
SCAF11-207ENST00000484275 TYW3Q6IPR3 259 aaKnown RBP4.53□□□□□ -1.68
SCAF11-207ENST00000484275 KRTAP5-1Q6L8H4 278 aa4.53□□□□□ -1.68
SCAF11-207ENST00000484275 DSTYKQ6XUX3 929 aa4.53□□□□□ -1.68
SCAF11-207ENST00000484275 FAM186BQ8IYM0 893 aa4.53□□□□□ -1.68
SCAF11-207ENST00000484275 POC1AQ8NBT0 407 aa4.53□□□□□ -1.68
SCAF11-207ENST00000484275 OR4N2Q8NGD1 307 aa4.53□□□□□ -1.68
SCAF11-207ENST00000484275 CPT1BQ92523 772 aa4.53□□□□□ -1.68
SCAF11-207ENST00000484275 ATOH1Q92858 354 aaPredicted RBP4.53□□□□□ -1.68
SCAF11-207ENST00000484275 SCMH1Q96GD3 660 aa4.53□□□□□ -1.68
SCAF11-207ENST00000484275 TNIP3Q96KP6 325 aa4.53□□□□□ -1.68
SCAF11-207ENST00000484275 MVB12BQ9H7P6 319 aa4.53□□□□□ -1.68
SCAF11-207ENST00000484275 GRHL1Q9NZI5 618 aa4.53□□□□□ -1.68
SCAF11-207ENST00000484275 HERC5Q9UII4 1024 aaKnown RBP4.53□□□□□ -1.68
SCAF11-207ENST00000484275 LMX1BO60663 402 aa4.52□□□□□ -1.69
SCAF11-207ENST00000484275 ACSM2AQ08AH3 577 aa4.52□□□□□ -1.69
SCAF11-207ENST00000484275 DHX34Q14147 1143 aaKnown RBP4.52□□□□□ -1.69
SCAF11-207ENST00000484275 RRAGAQ7L523 313 aa4.52□□□□□ -1.69
SCAF11-207ENST00000484275 RFWD2Q8NHY2 731 aa4.52□□□□□ -1.69
SCAF11-207ENST00000484275 SORCS1Q8WY21 1168 aa4.52□□□□□ -1.69
SCAF11-207ENST00000484275 C3orf49Q96BT1 292 aa4.52□□□□□ -1.69
SCAF11-207ENST00000484275 BICD1Q96G01 975 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms