RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 PTAR1Q7Z6K3 402 aaPredicted RBP13.16□□□□□ -0.3
UBR4-213ENST00000483922 DCP2Q8IU60 420 aaKnown RBP13.16□□□□□ -0.3
UBR4-213ENST00000483922 SLC35F3Q8IY50 421 aa13.16□□□□□ -0.3
UBR4-213ENST00000483922 OR7D4Q8NG98 312 aa13.16□□□□□ -0.3
UBR4-213ENST00000483922 GRIN3AQ8TCU5 1115 aa13.16□□□□□ -0.3
UBR4-213ENST00000483922 GSDMAQ96QA5 445 aa13.16□□□□□ -0.3
UBR4-213ENST00000483922 BOCQ9BWV1 1114 aa13.16□□□□□ -0.3
UBR4-213ENST00000483922 C1QTNF2Q9BXJ5 285 aa13.16□□□□□ -0.3
UBR4-213ENST00000483922 TRIM4Q9C037 500 aa13.16□□□□□ -0.3
UBR4-213ENST00000483922 CLPBQ9H078 707 aa13.16□□□□□ -0.3
UBR4-213ENST00000483922 MUC3BQ9H195 1237 aa13.16□□□□□ -0.3
UBR4-213ENST00000483922 UBE2TQ9NPD8 197 aaPredicted RBP13.16□□□□□ -0.3
UBR4-213ENST00000483922 PIGVQ9NUD9 493 aa13.16□□□□□ -0.3
UBR4-213ENST00000483922 IL36AQ9UHA7 158 aa13.16□□□□□ -0.3
UBR4-213ENST00000483922 RABGEF1Q9UJ41 708 aa13.16□□□□□ -0.3
UBR4-213ENST00000483922 PTPN13Q12923 2485 aa13.15□□□□□ -0.3
UBR4-213ENST00000483922 IGLON5A6NGN9 336 aa13.15□□□□□ -0.3
UBR4-213ENST00000483922 PPP1R3GB7ZBB8 358 aa13.15□□□□□ -0.3
UBR4-213ENST00000483922 P4HA2O15460 535 aa13.15□□□□□ -0.3
UBR4-213ENST00000483922 THAP12O43422 761 aa13.15□□□□□ -0.3
UBR4-213ENST00000483922 TNFSF15O95150 251 aa13.15□□□□□ -0.3
UBR4-213ENST00000483922 ERBB2P04626 1255 aa13.15□□□□□ -0.3
UBR4-213ENST00000483922 GLI1P08151 1106 aa13.15□□□□□ -0.3
UBR4-213ENST00000483922 SLC2A3P11169 496 aa13.15□□□□□ -0.3
UBR4-213ENST00000483922 KRT5P13647 590 aa13.15□□□□□ -0.3
UBR4-213ENST00000483922 ADRB3P13945 408 aa13.15□□□□□ -0.3
UBR4-213ENST00000483922 JUNDP17535 347 aa13.15□□□□□ -0.3
UBR4-213ENST00000483922 RBMS1P29558 406 aaKnown RBP13.15□□□□□ -0.3
UBR4-213ENST00000483922 ABL2P42684 1182 aa13.15□□□□□ -0.3
UBR4-213ENST00000483922 PFN3P60673 137 aa13.15□□□□□ -0.3
UBR4-213ENST00000483922 PDE1CQ14123 709 aaPredicted RBP13.15□□□□□ -0.3
UBR4-213ENST00000483922 OLFML1Q6UWY5 402 aa13.15□□□□□ -0.3
UBR4-213ENST00000483922 CCDC81Q6ZN84 652 aa13.15□□□□□ -0.3
UBR4-213ENST00000483922 RBM44Q6ZP01 1051 aaKnown RBP13.15□□□□□ -0.3
UBR4-213ENST00000483922 LMX1AQ8TE12 382 aa13.15□□□□□ -0.3
UBR4-213ENST00000483922 RNF34Q969K3 372 aa13.15□□□□□ -0.3
UBR4-213ENST00000483922 CEP63Q96MT8 703 aa13.15□□□□□ -0.3
UBR4-213ENST00000483922 LENG8Q96PV6 779 aaPredicted RBP13.15□□□□□ -0.3
UBR4-213ENST00000483922 PPP1R9BQ96SB3 815 aa13.15□□□□□ -0.3
UBR4-213ENST00000483922 GTPBP4Q9BZE4 634 aaKnown RBP13.15□□□□□ -0.3
UBR4-213ENST00000483922 INTS2Q9H0H0 1204 aaKnown RBP13.15□□□□□ -0.3
UBR4-213ENST00000483922 ASNSD1Q9NWL6 643 aa13.15□□□□□ -0.3
UBR4-213ENST00000483922 ARHGEF38Q9NXL2 777 aa13.15□□□□□ -0.3
UBR4-213ENST00000483922 MPP6Q9NZW5 540 aa13.15□□□□□ -0.3
UBR4-213ENST00000483922 IL17BQ9UHF5 180 aa13.15□□□□□ -0.3
UBR4-213ENST00000483922 SPENQ96T58 3664 aaKnown RBP13.15□□□□□ -0.3
UBR4-213ENST00000483922 M0QYT0 321 aa13.14□□□□□ -0.31
UBR4-213ENST00000483922 NTN3O00634 580 aaPredicted RBP13.14□□□□□ -0.31
UBR4-213ENST00000483922 TERTO14746 1132 aaKnown RBP13.14□□□□□ -0.31
UBR4-213ENST00000483922 MUSKO15146 869 aa13.14□□□□□ -0.31
UBR4-213ENST00000483922 YY2O15391 372 aa13.14□□□□□ -0.31
UBR4-213ENST00000483922 PRNPP04156 253 aa13.14□□□□□ -0.31
UBR4-213ENST00000483922 RHOCP08134 193 aa13.14□□□□□ -0.31
UBR4-213ENST00000483922 CELA2BP08218 269 aaPredicted RBP13.14□□□□□ -0.31
UBR4-213ENST00000483922 GNA15P30679 374 aa13.14□□□□□ -0.31
UBR4-213ENST00000483922 L1CAMP32004 1257 aa13.14□□□□□ -0.31
UBR4-213ENST00000483922 CXCR3P49682 368 aa13.14□□□□□ -0.31
UBR4-213ENST00000483922 ADKP55263 362 aaKnown RBP13.14□□□□□ -0.31
UBR4-213ENST00000483922 RPS21P63220 83 aaKnown RBP13.14□□□□□ -0.31
UBR4-213ENST00000483922 KRT83P78385 493 aa13.14□□□□□ -0.31
UBR4-213ENST00000483922 ARF5P84085 180 aa13.14□□□□□ -0.31
UBR4-213ENST00000483922 NFATC3Q12968 1075 aa13.14□□□□□ -0.31
UBR4-213ENST00000483922 C22orf39Q6P5X5 142 aa13.14□□□□□ -0.31
UBR4-213ENST00000483922 PARS2Q7L3T8 475 aaKnown RBP13.14□□□□□ -0.31
UBR4-213ENST00000483922 B3GNT8Q7Z7M8 397 aa13.14□□□□□ -0.31
UBR4-213ENST00000483922 PARGQ86W56 976 aa13.14□□□□□ -0.31
UBR4-213ENST00000483922 PASD1Q8IV76 773 aa13.14□□□□□ -0.31
UBR4-213ENST00000483922 TRIM59Q8IWR1 403 aa13.14□□□□□ -0.31
UBR4-213ENST00000483922 CENPTQ96BT3 561 aa13.14□□□□□ -0.31
UBR4-213ENST00000483922 FEM1CQ96JP0 617 aa13.14□□□□□ -0.31
UBR4-213ENST00000483922 PPP1R13BQ96KQ4 1090 aa13.14□□□□□ -0.31
UBR4-213ENST00000483922 NPY6RQ99463 290 aa13.14□□□□□ -0.31
UBR4-213ENST00000483922 TRIM62Q9BVG3 475 aa13.14□□□□□ -0.31
UBR4-213ENST00000483922 TKTL2Q9H0I9 626 aa13.14□□□□□ -0.31
UBR4-213ENST00000483922 RMND1Q9NWS8 449 aa13.14□□□□□ -0.31
UBR4-213ENST00000483922 AJAP1Q9UKB5 411 aaPredicted RBP13.14□□□□□ -0.31
UBR4-213ENST00000483922 ITM2BQ9Y287 266 aa13.14□□□□□ -0.31
UBR4-213ENST00000483922 TRPM6Q9BX84 2022 aa13.13□□□□□ -0.31
UBR4-213ENST00000483922 TPP1O14773 563 aa13.13□□□□□ -0.31
UBR4-213ENST00000483922 AP1G1O43747 822 aa13.13□□□□□ -0.31
UBR4-213ENST00000483922 HSP90AA1P07900 732 aaKnown RBP13.13□□□□□ -0.31
UBR4-213ENST00000483922 WT1P19544 449 aaPredicted RBP13.13□□□□□ -0.31
UBR4-213ENST00000483922 ITIH2P19823 946 aa13.13□□□□□ -0.31
UBR4-213ENST00000483922 RABIFP47224 123 aa13.13□□□□□ -0.31
UBR4-213ENST00000483922 CSRP3P50461 194 aa13.13□□□□□ -0.31
UBR4-213ENST00000483922 NEK3P51956 506 aa13.13□□□□□ -0.31
UBR4-213ENST00000483922 NR0B2Q15466 257 aa13.13□□□□□ -0.31
UBR4-213ENST00000483922 ZSCAN23Q3MJ62 389 aa13.13□□□□□ -0.31
UBR4-213ENST00000483922 CCDC40Q4G0X9 1142 aa13.13□□□□□ -0.31
UBR4-213ENST00000483922 EFHC1Q5JVL4 640 aa13.13□□□□□ -0.31
UBR4-213ENST00000483922 KIAA1161Q6NSJ0 714 aa13.13□□□□□ -0.31
UBR4-213ENST00000483922 PRICKLE2Q7Z3G6 844 aa13.13□□□□□ -0.31
UBR4-213ENST00000483922 TFAP2DQ7Z6R9 452 aa13.13□□□□□ -0.31
UBR4-213ENST00000483922 HSCBQ8IWL3 235 aa13.13□□□□□ -0.31
UBR4-213ENST00000483922 DCAF4L2Q8NA75 395 aa13.13□□□□□ -0.31
UBR4-213ENST00000483922 WDR36Q8NI36 951 aaKnown RBP13.13□□□□□ -0.31
UBR4-213ENST00000483922 FAM174AQ8TBP5 190 aa13.13□□□□□ -0.31
UBR4-213ENST00000483922 NT5C3BQ969T7 300 aa13.13□□□□□ -0.31
UBR4-213ENST00000483922 GRAMD1AQ96CP6 724 aa13.13□□□□□ -0.31
UBR4-213ENST00000483922 DHTKD1Q96HY7 919 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms