RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 HPCAL4Q9UM19 191 aa20.24■□□□□ 0.83
HPS4-213ENST00000483631 A0A1W2PQU0 124 aa20.23■□□□□ 0.83
HPS4-213ENST00000483631 ZSCAN5CA6NGD5 496 aaPredicted RBP20.23■□□□□ 0.83
HPS4-213ENST00000483631 AP1G1O43747 822 aa20.23■□□□□ 0.83
HPS4-213ENST00000483631 CD160O95971 181 aa20.23■□□□□ 0.83
HPS4-213ENST00000483631 APC2O95996 2303 aa20.23■□□□□ 0.83
HPS4-213ENST00000483631 L1CAMP32004 1257 aa20.23■□□□□ 0.83
HPS4-213ENST00000483631 ZNF143P52747 638 aaPredicted RBP20.23■□□□□ 0.83
HPS4-213ENST00000483631 TYRO3Q06418 890 aa20.23■□□□□ 0.83
HPS4-213ENST00000483631 ZNF284Q2VY69 593 aa20.23■□□□□ 0.83
HPS4-213ENST00000483631 RAB6CQ53S08 254 aa20.23■□□□□ 0.83
HPS4-213ENST00000483631 PRAMEF14Q5SWL7 426 aa20.23■□□□□ 0.83
HPS4-213ENST00000483631 KIAA1161Q6NSJ0 714 aa20.23■□□□□ 0.83
HPS4-213ENST00000483631 RWDD4Q6NW29 188 aaKnown RBP20.23■□□□□ 0.83
HPS4-213ENST00000483631 SLFN11Q7Z7L1 901 aa20.23■□□□□ 0.83
HPS4-213ENST00000483631 PROSER1Q86XN7 944 aa20.23■□□□□ 0.83
HPS4-213ENST00000483631 GATAD2AQ86YP4 633 aa20.23■□□□□ 0.83
HPS4-213ENST00000483631 GRIN3AQ8TCU5 1115 aa20.23■□□□□ 0.83
HPS4-213ENST00000483631 ARHGEF2Q92974 986 aaKnown RBP20.23■□□□□ 0.83
HPS4-213ENST00000483631 KLHDC7BQ96G42 594 aa20.23■□□□□ 0.83
HPS4-213ENST00000483631 VCPIP1Q96JH7 1222 aa20.23■□□□□ 0.83
HPS4-213ENST00000483631 RAB6CQ9H0N0 254 aa20.23■□□□□ 0.83
HPS4-213ENST00000483631 DKK4Q9UBT3 224 aa20.23■□□□□ 0.83
HPS4-213ENST00000483631 CFAP47Q6ZTR5 3102 aa20.23■□□□□ 0.83
HPS4-213ENST00000483631 SPEGQ15772 3267 aa20.22■□□□□ 0.83
HPS4-213ENST00000483631 ENC1O14682 589 aa20.22■□□□□ 0.83
HPS4-213ENST00000483631 RAMP2O60895 175 aa20.22■□□□□ 0.83
HPS4-213ENST00000483631 LDOC1O95751 146 aaPredicted RBP20.22■□□□□ 0.83
HPS4-213ENST00000483631 GSRP00390 522 aa20.22■□□□□ 0.83
HPS4-213ENST00000483631 DESP17661 470 aa20.22■□□□□ 0.83
HPS4-213ENST00000483631 HNRNPA2B1P22626 353 aaKnown RBP20.22■□□□□ 0.83
HPS4-213ENST00000483631 AKT2P31751 481 aa20.22■□□□□ 0.83
HPS4-213ENST00000483631 CCNHP51946 323 aaPredicted RBP20.22■□□□□ 0.83
HPS4-213ENST00000483631 TMEM259Q4ZIN3 620 aa20.22■□□□□ 0.83
HPS4-213ENST00000483631 DNAJC24Q6P3W2 148 aa20.22■□□□□ 0.83
HPS4-213ENST00000483631 KANSL1Q7Z3B3 1105 aa20.22■□□□□ 0.83
HPS4-213ENST00000483631 PHLDB2Q86SQ0 1253 aa20.22■□□□□ 0.83
HPS4-213ENST00000483631 CCDC185Q8N715 623 aa20.22■□□□□ 0.83
HPS4-213ENST00000483631 CASKIN2Q8WXE0 1202 aa20.22■□□□□ 0.83
HPS4-213ENST00000483631 RAB7BQ96AH8 199 aa20.22■□□□□ 0.83
HPS4-213ENST00000483631 CNDP2Q96KP4 475 aaKnown RBP20.22■□□□□ 0.83
HPS4-213ENST00000483631 NDFIP2Q9NV92 336 aa20.22■□□□□ 0.83
HPS4-213ENST00000483631 ZZEF1O43149 2961 aa20.22■□□□□ 0.83
HPS4-213ENST00000483631 FAM72CH0Y354 149 aa20.21■□□□□ 0.83
HPS4-213ENST00000483631 GJB6O95452 261 aa20.21■□□□□ 0.83
HPS4-213ENST00000483631 ADRB3P13945 408 aa20.21■□□□□ 0.83
HPS4-213ENST00000483631 HTR7P34969 479 aa20.21■□□□□ 0.83
HPS4-213ENST00000483631 ACVRL1P37023 503 aa20.21■□□□□ 0.83
HPS4-213ENST00000483631 YBEYP58557 167 aaPredicted RBP20.21■□□□□ 0.83
HPS4-213ENST00000483631 RPS21P63220 83 aaKnown RBP20.21■□□□□ 0.83
HPS4-213ENST00000483631 ILKQ13418 452 aa20.21■□□□□ 0.83
HPS4-213ENST00000483631 POLD3Q15054 466 aaPredicted RBP20.21■□□□□ 0.83
HPS4-213ENST00000483631 EFHC2Q5JST6 749 aa20.21■□□□□ 0.83
HPS4-213ENST00000483631 PPP1R15BQ5SWA1 713 aa20.21■□□□□ 0.83
HPS4-213ENST00000483631 FAM72AQ5TYM5 149 aa20.21■□□□□ 0.83
HPS4-213ENST00000483631 ACAD10Q6JQN1 1059 aa20.21■□□□□ 0.83
HPS4-213ENST00000483631 FAM72DQ6L9T8 149 aa20.21■□□□□ 0.83
HPS4-213ENST00000483631 TMPRSS12Q86WS5 348 aa20.21■□□□□ 0.83
HPS4-213ENST00000483631 FAM72BQ86X60 149 aa20.21■□□□□ 0.83
HPS4-213ENST00000483631 DCP2Q8IU60 420 aaKnown RBP20.21■□□□□ 0.83
HPS4-213ENST00000483631 AOPEPQ8N6M6 819 aa20.21■□□□□ 0.83
HPS4-213ENST00000483631 IFT43Q96FT9 208 aa20.21■□□□□ 0.83
HPS4-213ENST00000483631 CNPY3Q9BT09 278 aa20.21■□□□□ 0.83
HPS4-213ENST00000483631 CCDC86Q9H6F5 360 aaKnown RBP20.21■□□□□ 0.83
HPS4-213ENST00000483631 SEPT11Q9NVA2 429 aaKnown RBP20.21■□□□□ 0.83
HPS4-213ENST00000483631 DONSONQ9NYP3 566 aa20.21■□□□□ 0.83
HPS4-213ENST00000483631 DNAI1Q9UI46 699 aa20.21■□□□□ 0.83
HPS4-213ENST00000483631 FCF1Q9Y324 198 aaKnown RBP20.21■□□□□ 0.83
HPS4-213ENST00000483631 HS3ST3A1Q9Y663 406 aa20.21■□□□□ 0.83
HPS4-213ENST00000483631 DMXL2Q8TDJ6 3036 aa20.21■□□□□ 0.83
HPS4-213ENST00000483631 SMTNL1A8MU46 457 aa20.2■□□□□ 0.82
HPS4-213ENST00000483631 WASH4PA8MWX3 477 aa20.2■□□□□ 0.82
HPS4-213ENST00000483631 SLC31A1O15431 190 aa20.2■□□□□ 0.82
HPS4-213ENST00000483631 KDELR3O43731 214 aa20.2■□□□□ 0.82
HPS4-213ENST00000483631 PCDH8O95206 1070 aa20.2■□□□□ 0.82
HPS4-213ENST00000483631 THEGLP0DJG4 465 aa20.2■□□□□ 0.82
HPS4-213ENST00000483631 ATP1A3P13637 1013 aa20.2■□□□□ 0.82
HPS4-213ENST00000483631 SNRPD1P62314 119 aaKnown RBP20.2■□□□□ 0.82
HPS4-213ENST00000483631 FBXL19Q6PCT2 694 aa20.2■□□□□ 0.82
HPS4-213ENST00000483631 IRF2BP2Q7Z5L9 587 aa20.2■□□□□ 0.82
HPS4-213ENST00000483631 ABI3BPQ7Z7G0 1075 aa20.2■□□□□ 0.82
HPS4-213ENST00000483631 MCOLN2Q8IZK6 566 aa20.2■□□□□ 0.82
HPS4-213ENST00000483631 RTL3Q8N8U3 475 aaKnown RBP20.2■□□□□ 0.82
HPS4-213ENST00000483631 OR2AP1Q8NGE2 309 aa20.2■□□□□ 0.82
HPS4-213ENST00000483631 TSC1Q92574 1164 aa20.2■□□□□ 0.82
HPS4-213ENST00000483631 FEM1CQ96JP0 617 aa20.2■□□□□ 0.82
HPS4-213ENST00000483631 EPAS1Q99814 870 aa20.2■□□□□ 0.82
HPS4-213ENST00000483631 SYT11Q9BT88 431 aa20.2■□□□□ 0.82
HPS4-213ENST00000483631 OSBPL1AQ9BXW6 950 aa20.2■□□□□ 0.82
HPS4-213ENST00000483631 KLHL11Q9NVR0 708 aa20.2■□□□□ 0.82
HPS4-213ENST00000483631 HECAQ9UBI9 543 aaPredicted RBP20.2■□□□□ 0.82
HPS4-213ENST00000483631 ZFR2Q9UPR6 939 aaKnown RBP20.2■□□□□ 0.82
HPS4-213ENST00000483631 FADS3Q9Y5Q0 445 aa20.2■□□□□ 0.82
HPS4-213ENST00000483631 TDRD6O60522 2096 aaKnown RBP20.19■□□□□ 0.82
HPS4-213ENST00000483631 GOLGA8CPA6NN73 597 aa20.19■□□□□ 0.82
HPS4-213ENST00000483631 EIF3CLB5ME19 914 aaKnown RBP20.19■□□□□ 0.82
HPS4-213ENST00000483631 RNF103O00237 685 aa20.19■□□□□ 0.82
HPS4-213ENST00000483631 CCP110O43303 1012 aa20.19■□□□□ 0.82
HPS4-213ENST00000483631 RFPL3O75679 317 aa20.19■□□□□ 0.82
HPS4-213ENST00000483631 DNA2P51530 1060 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms