RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 FAM217AQ8IXS0 508 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 SIX6OS1Q8N1H7 587 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 GUF1Q8N442 669 aaKnown RBP6.1□□□□□ -1.43
CSDE1-207ENST00000483407 SLC4A11Q8NBS3 891 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 FBXL13Q8NEE6 735 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 GANCQ8TET4 914 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 FBLIM1Q8WUP2 373 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 IGSF8Q969P0 613 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 SNX21Q969T3 373 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 SKA1Q96BD8 255 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 P2RY11Q96G91 374 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 CCDC34Q96HJ3 373 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 KREMEN1Q96MU8 473 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 ULBP1Q9BZM6 244 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 C6orf106Q9H6K1 298 aaPredicted RBP6.1□□□□□ -1.43
CSDE1-207ENST00000483407 SGK2Q9HBY8 427 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 TM9SF3Q9HD45 589 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 ABCB8Q9NUT2 735 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 RAB20Q9NX57 234 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 DKK4Q9UBT3 224 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 SUN2Q9UH99 717 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 RCOR1Q9UKL0 485 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 CLEC4EQ9ULY5 219 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 NCKAP1Q9Y2A7 1128 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 ANKRD6Q9Y2G4 727 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 RAXQ9Y2V3 346 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.1□□□□□ -1.43
CSDE1-207ENST00000483407 SNX11Q9Y5W9 270 aa6.1□□□□□ -1.43
CSDE1-207ENST00000483407 PCDH15Q96QU1 1955 aa6.09□□□□□ -1.43
CSDE1-207ENST00000483407 PLXND1Q9Y4D7 1925 aa6.09□□□□□ -1.43
CSDE1-207ENST00000483407 TRABD2BA6NFA1 517 aa6.09□□□□□ -1.43
CSDE1-207ENST00000483407 E9PAM4 449 aa6.09□□□□□ -1.43
CSDE1-207ENST00000483407 CETN3O15182 167 aa6.09□□□□□ -1.43
CSDE1-207ENST00000483407 RNASEH1O60930 286 aaKnown RBP6.09□□□□□ -1.43
CSDE1-207ENST00000483407 ASMTLO95671 621 aa6.09□□□□□ -1.43
CSDE1-207ENST00000483407 DLDP09622 509 aaKnown RBP6.09□□□□□ -1.43
CSDE1-207ENST00000483407 ATXN1LP0C7T5 689 aaKnown RBP6.09□□□□□ -1.43
CSDE1-207ENST00000483407 SETSIPP0DME0 302 aa6.09□□□□□ -1.43
CSDE1-207ENST00000483407 PABPC1P11940 636 aaKnown RBP6.09□□□□□ -1.43
CSDE1-207ENST00000483407 CD19P15391 556 aa6.09□□□□□ -1.43
CSDE1-207ENST00000483407 POLR2EP19388 210 aaKnown RBP6.09□□□□□ -1.43
CSDE1-207ENST00000483407 CD247P20963 164 aa6.09□□□□□ -1.43
CSDE1-207ENST00000483407 CD27P26842 260 aa6.09□□□□□ -1.43
CSDE1-207ENST00000483407 ETV3P41162 512 aa6.09□□□□□ -1.43
CSDE1-207ENST00000483407 SLC11A2P49281 568 aa6.09□□□□□ -1.43
CSDE1-207ENST00000483407 ST8SIA6P61647 398 aa6.09□□□□□ -1.43
CSDE1-207ENST00000483407 RPS14P62263 151 aaKnown RBP6.09□□□□□ -1.43
CSDE1-207ENST00000483407 RNF4P78317 190 aa6.09□□□□□ -1.43
CSDE1-207ENST00000483407 BNC1Q01954 994 aa6.09□□□□□ -1.43
CSDE1-207ENST00000483407 CYP4F3Q08477 520 aa6.09□□□□□ -1.43
CSDE1-207ENST00000483407 ADIGQ0VDE8 80 aa6.09□□□□□ -1.43
CSDE1-207ENST00000483407 BST2Q10589 180 aaKnown RBP6.09□□□□□ -1.43
CSDE1-207ENST00000483407 AUHQ13825 339 aaKnown RBP6.09□□□□□ -1.43
CSDE1-207ENST00000483407 MAP7Q14244 749 aa6.09□□□□□ -1.43
CSDE1-207ENST00000483407 GOLGA7BQ2TAP0 167 aa6.09□□□□□ -1.43
CSDE1-207ENST00000483407 EDRF1Q3B7T1 1238 aa6.09□□□□□ -1.43
CSDE1-207ENST00000483407 SOWAHCQ53LP3 525 aaPredicted RBP6.09□□□□□ -1.43
CSDE1-207ENST00000483407 SGO2Q562F6 1265 aa6.09□□□□□ -1.43
CSDE1-207ENST00000483407 CCDC157Q569K6 752 aa6.09□□□□□ -1.43
CSDE1-207ENST00000483407 MPP7Q5T2T1 576 aa6.09□□□□□ -1.43
CSDE1-207ENST00000483407 ADGRF1Q5T601 910 aa6.09□□□□□ -1.43
CSDE1-207ENST00000483407 BSPRYQ5W0U4 402 aa6.09□□□□□ -1.43
CSDE1-207ENST00000483407 NUGGCQ68CJ6 796 aa6.09□□□□□ -1.43
CSDE1-207ENST00000483407 MBLAC2Q68D91 279 aa6.09□□□□□ -1.43
CSDE1-207ENST00000483407 ZNF776Q68DI1 518 aaPredicted RBP6.09□□□□□ -1.43
CSDE1-207ENST00000483407 CCDC117Q8IWD4 279 aaPredicted RBP6.09□□□□□ -1.43
CSDE1-207ENST00000483407 UNC45BQ8IWX7 931 aa6.09□□□□□ -1.43
CSDE1-207ENST00000483407 ZNF366Q8N895 744 aa6.09□□□□□ -1.43
CSDE1-207ENST00000483407 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.09□□□□□ -1.43
CSDE1-207ENST00000483407 RNF141Q8WVD5 230 aa6.09□□□□□ -1.43
CSDE1-207ENST00000483407 KISS1RQ969F8 398 aaPredicted RBP6.09□□□□□ -1.43
CSDE1-207ENST00000483407 BIRC7Q96CA5 298 aa6.09□□□□□ -1.43
CSDE1-207ENST00000483407 LRIG1Q96JA1 1093 aa6.09□□□□□ -1.43
CSDE1-207ENST00000483407 MIPEPQ99797 713 aa6.09□□□□□ -1.43
CSDE1-207ENST00000483407 DDX50Q9BQ39 737 aaKnown RBP6.09□□□□□ -1.43
CSDE1-207ENST00000483407 KRTAP4-12Q9BQ66 201 aa6.09□□□□□ -1.43
CSDE1-207ENST00000483407 ASPNQ9BXN1 380 aa6.09□□□□□ -1.43
CSDE1-207ENST00000483407 ACE2Q9BYF1 805 aaPredicted RBP6.09□□□□□ -1.43
CSDE1-207ENST00000483407 TMEM245Q9H330 911 aa6.09□□□□□ -1.43
CSDE1-207ENST00000483407 CNGB3Q9NQW8 809 aa6.09□□□□□ -1.43
CSDE1-207ENST00000483407 ABCC13Q9NSE7 274 aa6.09□□□□□ -1.43
CSDE1-207ENST00000483407 WHRNQ9P202 907 aa6.09□□□□□ -1.43
CSDE1-207ENST00000483407 APEX2Q9UBZ4 518 aa6.09□□□□□ -1.43
CSDE1-207ENST00000483407 FTSJ1Q9UET6 329 aa6.09□□□□□ -1.43
CSDE1-207ENST00000483407 SFMBT1Q9UHJ3 866 aa6.09□□□□□ -1.43
CSDE1-207ENST00000483407 GGA2Q9UJY4 613 aa6.09□□□□□ -1.43
CSDE1-207ENST00000483407 STOML2Q9UJZ1 356 aa6.09□□□□□ -1.43
CSDE1-207ENST00000483407 TSPAN16Q9UKR8 245 aa6.09□□□□□ -1.43
CSDE1-207ENST00000483407 SCML1Q9UN30 329 aa6.09□□□□□ -1.43
CSDE1-207ENST00000483407 HPSEQ9Y251 543 aa6.09□□□□□ -1.43
CSDE1-207ENST00000483407 BTBD3Q9Y2F9 522 aa6.09□□□□□ -1.43
CSDE1-207ENST00000483407 ZNF451Q9Y4E5 1061 aa6.09□□□□□ -1.43
CSDE1-207ENST00000483407 TNRC6BQ9UPQ9 1833 aaKnown RBP6.09□□□□□ -1.44
CSDE1-207ENST00000483407 PI4KAP42356 2102 aa6.08□□□□□ -1.44
CSDE1-207ENST00000483407 MYO18AQ92614 2054 aaKnown RBP6.08□□□□□ -1.44
CSDE1-207ENST00000483407 MYOFQ9NZM1 2061 aa6.08□□□□□ -1.44
CSDE1-207ENST00000483407 WDFY3Q8IZQ1 3526 aa6.08□□□□□ -1.44
CSDE1-207ENST00000483407 A0A1W2PPC4 97 aa6.08□□□□□ -1.44
CSDE1-207ENST00000483407 FAM47DPA6NHR8 397 aa6.08□□□□□ -1.44
CSDE1-207ENST00000483407 LRRC72A6NJI9 287 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms