RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 NMRAL1Q9HBL8 299 aa11.97□□□□□ -0.49
VTI1A-205ENST00000483122 SYBUQ9NX95 663 aa11.97□□□□□ -0.49
VTI1A-205ENST00000483122 TMEM9Q9P0T7 183 aa11.97□□□□□ -0.49
VTI1A-205ENST00000483122 DNMT3BQ9UBC3 853 aaKnown RBP11.97□□□□□ -0.49
VTI1A-205ENST00000483122 FBXO40Q9UH90 709 aa11.97□□□□□ -0.49
VTI1A-205ENST00000483122 TK2O00142 265 aa11.97□□□□□ -0.49
VTI1A-205ENST00000483122 CLOCKO15516 846 aa11.97□□□□□ -0.49
VTI1A-205ENST00000483122 ATP6V1B2P21281 511 aa11.97□□□□□ -0.49
VTI1A-205ENST00000483122 GPD1P21695 349 aa11.97□□□□□ -0.49
VTI1A-205ENST00000483122 HPCAL1P37235 193 aa11.97□□□□□ -0.49
VTI1A-205ENST00000483122 ZNF143P52747 638 aaPredicted RBP11.97□□□□□ -0.49
VTI1A-205ENST00000483122 CAMK2BQ13554 666 aa11.97□□□□□ -0.49
VTI1A-205ENST00000483122 LRP8Q14114 963 aa11.97□□□□□ -0.49
VTI1A-205ENST00000483122 REP15Q6BDI9 236 aa11.97□□□□□ -0.49
VTI1A-205ENST00000483122 CDKL3Q8IVW4 592 aaPredicted RBP11.97□□□□□ -0.49
VTI1A-205ENST00000483122 LSMEM2Q8N112 164 aa11.97□□□□□ -0.49
VTI1A-205ENST00000483122 OR13F1Q8NGS4 319 aa11.97□□□□□ -0.49
VTI1A-205ENST00000483122 EFHD2Q96C19 240 aaPredicted RBP11.97□□□□□ -0.49
VTI1A-205ENST00000483122 LHX5Q9H2C1 402 aa11.97□□□□□ -0.49
VTI1A-205ENST00000483122 VTA1Q9NP79 307 aa11.97□□□□□ -0.49
VTI1A-205ENST00000483122 CACNA2D2Q9NY47 1150 aa11.97□□□□□ -0.49
VTI1A-205ENST00000483122 UTP6Q9NYH9 597 aaKnown RBP11.97□□□□□ -0.49
VTI1A-205ENST00000483122 CD300AQ9UGN4 299 aa11.97□□□□□ -0.49
VTI1A-205ENST00000483122 SEPT9Q9UHD8 586 aaPredicted RBP11.97□□□□□ -0.49
VTI1A-205ENST00000483122 ERVK-11Q9UQG0 969 aa11.97□□□□□ -0.49
VTI1A-205ENST00000483122 TRAF6Q9Y4K3 522 aa11.97□□□□□ -0.49
VTI1A-205ENST00000483122 TPST1O60507 370 aa11.96□□□□□ -0.49
VTI1A-205ENST00000483122 PGAM1P18669 254 aa11.96□□□□□ -0.49
VTI1A-205ENST00000483122 NR4A1P22736 598 aa11.96□□□□□ -0.49
VTI1A-205ENST00000483122 PTPN9P43378 593 aa11.96□□□□□ -0.49
VTI1A-205ENST00000483122 ASPAP45381 313 aa11.96□□□□□ -0.49
VTI1A-205ENST00000483122 PCYT1AP49585 367 aa11.96□□□□□ -0.49
VTI1A-205ENST00000483122 NAGLUP54802 743 aa11.96□□□□□ -0.49
VTI1A-205ENST00000483122 DMPKQ09013 629 aa11.96□□□□□ -0.49
VTI1A-205ENST00000483122 GRTP1Q5TC63 336 aa11.96□□□□□ -0.49
VTI1A-205ENST00000483122 FSTL4Q6MZW2 842 aa11.96□□□□□ -0.49
VTI1A-205ENST00000483122 DSG4Q86SJ6 1040 aa11.96□□□□□ -0.49
VTI1A-205ENST00000483122 CLEC14AQ86T13 490 aa11.96□□□□□ -0.49
VTI1A-205ENST00000483122 CAMK1DQ8IU85 385 aa11.96□□□□□ -0.49
VTI1A-205ENST00000483122 CHURC1Q8WUH1 139 aa11.96□□□□□ -0.49
VTI1A-205ENST00000483122 SREK1Q8WXA9 508 aaKnown RBP11.96□□□□□ -0.49
VTI1A-205ENST00000483122 SNX19Q92543 992 aa11.96□□□□□ -0.49
VTI1A-205ENST00000483122 TMEM143Q96AN5 459 aa11.96□□□□□ -0.49
VTI1A-205ENST00000483122 FEM1CQ96JP0 617 aa11.96□□□□□ -0.49
VTI1A-205ENST00000483122 GLT1D1Q96MS3 346 aa11.96□□□□□ -0.49
VTI1A-205ENST00000483122 ZDHHC15Q96MV8 337 aa11.96□□□□□ -0.49
VTI1A-205ENST00000483122 FCRL3Q96P31 734 aaPredicted RBP11.96□□□□□ -0.49
VTI1A-205ENST00000483122 TAAR1Q96RJ0 339 aa11.96□□□□□ -0.49
VTI1A-205ENST00000483122 RBBP8Q99708 897 aa11.96□□□□□ -0.49
VTI1A-205ENST00000483122 MAGEB5Q9BZ81 275 aa11.96□□□□□ -0.49
VTI1A-205ENST00000483122 SEPT3Q9UH03 358 aa11.96□□□□□ -0.49
VTI1A-205ENST00000483122 AURKCQ9UQB9 309 aa11.96□□□□□ -0.49
VTI1A-205ENST00000483122 DGKBQ9Y6T7 804 aa11.96□□□□□ -0.49
VTI1A-205ENST00000483122 B4GAT1O43505 415 aa11.96□□□□□ -0.5
VTI1A-205ENST00000483122 MYO1DO94832 1006 aa11.96□□□□□ -0.5
VTI1A-205ENST00000483122 C2P06681 752 aa11.96□□□□□ -0.5
VTI1A-205ENST00000483122 SBK3P0C264 359 aa11.96□□□□□ -0.5
VTI1A-205ENST00000483122 PDGFRAP16234 1089 aa11.96□□□□□ -0.5
VTI1A-205ENST00000483122 CDH8P55286 799 aa11.96□□□□□ -0.5
VTI1A-205ENST00000483122 RPS6P62753 249 aaKnown RBP11.96□□□□□ -0.5
VTI1A-205ENST00000483122 IFITM3Q01628 133 aa11.96□□□□□ -0.5
VTI1A-205ENST00000483122 FSTL1Q12841 308 aa11.96□□□□□ -0.5
VTI1A-205ENST00000483122 SELENBP1Q13228 472 aa11.96□□□□□ -0.5
VTI1A-205ENST00000483122 NAB1Q13506 487 aa11.96□□□□□ -0.5
VTI1A-205ENST00000483122 DGKDQ16760 1214 aa11.96□□□□□ -0.5
VTI1A-205ENST00000483122 PGS1Q32NB8 556 aa11.96□□□□□ -0.5
VTI1A-205ENST00000483122 INAVAQ3KP66 663 aa11.96□□□□□ -0.5
VTI1A-205ENST00000483122 SMUG1Q53HV7 270 aa11.96□□□□□ -0.5
VTI1A-205ENST00000483122 ABRAXAS1Q6UWZ7 409 aa11.96□□□□□ -0.5
VTI1A-205ENST00000483122 VASH1Q7L8A9 365 aaPredicted RBP11.96□□□□□ -0.5
VTI1A-205ENST00000483122 PODNQ7Z5L7 613 aa11.96□□□□□ -0.5
VTI1A-205ENST00000483122 STRA8Q7Z7C7 330 aa11.96□□□□□ -0.5
VTI1A-205ENST00000483122 TMEM130Q8N3G9 435 aa11.96□□□□□ -0.5
VTI1A-205ENST00000483122 Q8N9G6 341 aaPredicted RBP11.96□□□□□ -0.5
VTI1A-205ENST00000483122 MCPH1Q8NEM0 835 aa11.96□□□□□ -0.5
VTI1A-205ENST00000483122 BPIFB6Q8NFQ5 453 aa11.96□□□□□ -0.5
VTI1A-205ENST00000483122 ABHD11Q8NFV4 315 aa11.96□□□□□ -0.5
VTI1A-205ENST00000483122 ISL2Q96A47 359 aa11.96□□□□□ -0.5
VTI1A-205ENST00000483122 AGAP2Q99490 1192 aa11.96□□□□□ -0.5
VTI1A-205ENST00000483122 CPNE1Q99829 537 aa11.96□□□□□ -0.5
VTI1A-205ENST00000483122 SLC39A3Q9BRY0 314 aa11.96□□□□□ -0.5
VTI1A-205ENST00000483122 CNPY3Q9BT09 278 aa11.96□□□□□ -0.5
VTI1A-205ENST00000483122 IDI2Q9BXS1 227 aa11.96□□□□□ -0.5
VTI1A-205ENST00000483122 SMARCAD1Q9H4L7 1026 aa11.96□□□□□ -0.5
VTI1A-205ENST00000483122 FANCEQ9HB96 536 aa11.96□□□□□ -0.5
VTI1A-205ENST00000483122 RNF103-CHMP3A0A140T963 221 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 LRRIQ4A6NIV6 560 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 H2AFYO75367 372 aaKnown RBP11.95□□□□□ -0.5
VTI1A-205ENST00000483122 DGAT1O75907 488 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 HSPA1AP0DMV8 641 aaKnown RBP11.95□□□□□ -0.5
VTI1A-205ENST00000483122 HSPA1BP0DMV9 641 aaKnown RBP11.95□□□□□ -0.5
VTI1A-205ENST00000483122 SFNP31947 248 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 CA8P35219 290 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 TMBIM6P55061 237 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 SP4Q02446 784 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 PRKAA1Q13131 559 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 BFSP2Q13515 415 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 OLIG2Q13516 323 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 PLCL1Q15111 1095 aa11.95□□□□□ -0.5
VTI1A-205ENST00000483122 TIGD2Q4W5G0 525 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms