RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 NME1P15531 152 aaKnown RBP7.54□□□□□ -1.2
CSDE1-206ENST00000483030 JUNDP17535 347 aa7.54□□□□□ -1.2
CSDE1-206ENST00000483030 USP8P40818 1118 aa7.54□□□□□ -1.2
CSDE1-206ENST00000483030 RECQLP46063 649 aaPredicted RBP7.54□□□□□ -1.2
CSDE1-206ENST00000483030 DNA2P51530 1060 aa7.54□□□□□ -1.2
CSDE1-206ENST00000483030 RPS21P63220 83 aaKnown RBP7.54□□□□□ -1.2
CSDE1-206ENST00000483030 SKOR1P84550 965 aa7.54□□□□□ -1.2
CSDE1-206ENST00000483030 MTA1Q13330 715 aa7.54□□□□□ -1.2
CSDE1-206ENST00000483030 STIM1Q13586 685 aa7.54□□□□□ -1.2
CSDE1-206ENST00000483030 MEA1Q16626 185 aa7.54□□□□□ -1.2
CSDE1-206ENST00000483030 DEFB133Q30KQ1 61 aa7.54□□□□□ -1.2
CSDE1-206ENST00000483030 C5orf22Q49AR2 442 aa7.54□□□□□ -1.2
CSDE1-206ENST00000483030 TPRG1LQ5T0D9 272 aa7.54□□□□□ -1.2
CSDE1-206ENST00000483030 KLHL10Q6JEL2 608 aa7.54□□□□□ -1.2
CSDE1-206ENST00000483030 INO80CQ6PI98 192 aaPredicted RBP7.54□□□□□ -1.2
CSDE1-206ENST00000483030 IGF2-ASQ6U949 168 aa7.54□□□□□ -1.2
CSDE1-206ENST00000483030 KYAT3Q6YP21 454 aaKnown RBP7.54□□□□□ -1.2
CSDE1-206ENST00000483030 CCDC81Q6ZN84 652 aa7.54□□□□□ -1.2
CSDE1-206ENST00000483030 RBM44Q6ZP01 1051 aaKnown RBP7.54□□□□□ -1.2
CSDE1-206ENST00000483030 DPY19L3Q6ZPD9 716 aa7.54□□□□□ -1.2
CSDE1-206ENST00000483030 PARGQ86W56 976 aa7.54□□□□□ -1.2
CSDE1-206ENST00000483030 TPCN2Q8NHX9 752 aa7.54□□□□□ -1.2
CSDE1-206ENST00000483030 SPATA20Q8TB22 786 aa7.54□□□□□ -1.2
CSDE1-206ENST00000483030 FAM174AQ8TBP5 190 aa7.54□□□□□ -1.2
CSDE1-206ENST00000483030 LMX1AQ8TE12 382 aa7.54□□□□□ -1.2
CSDE1-206ENST00000483030 GRAMD1AQ96CP6 724 aa7.54□□□□□ -1.2
CSDE1-206ENST00000483030 PRR11Q96HE9 360 aaPredicted RBP7.54□□□□□ -1.2
CSDE1-206ENST00000483030 IL12RB2Q99665 862 aa7.54□□□□□ -1.2
CSDE1-206ENST00000483030 SPON2Q9BUD6 331 aa7.54□□□□□ -1.2
CSDE1-206ENST00000483030 ANLNQ9NQW6 1124 aa7.54□□□□□ -1.2
CSDE1-206ENST00000483030 GPR27Q9NS67 375 aa7.54□□□□□ -1.2
CSDE1-206ENST00000483030 ASNSD1Q9NWL6 643 aa7.54□□□□□ -1.2
CSDE1-206ENST00000483030 MPP6Q9NZW5 540 aa7.54□□□□□ -1.2
CSDE1-206ENST00000483030 IL36AQ9UHA7 158 aa7.54□□□□□ -1.2
CSDE1-206ENST00000483030 SALL4Q9UJQ4 1053 aa7.54□□□□□ -1.2
CSDE1-206ENST00000483030 ATP6V1DQ9Y5K8 247 aa7.54□□□□□ -1.2
CSDE1-206ENST00000483030 SNX10Q9Y5X0 201 aa7.54□□□□□ -1.2
CSDE1-206ENST00000483030 WASF2Q9Y6W5 498 aa7.54□□□□□ -1.2
CSDE1-206ENST00000483030 TENM4Q6N022 2769 aa7.54□□□□□ -1.2
CSDE1-206ENST00000483030 MYLKQ15746 1914 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 EME2A4GXA9 379 aaPredicted RBP7.53□□□□□ -1.2
CSDE1-206ENST00000483030 IGLON5A6NGN9 336 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 DRGXA6NNA5 263 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 BECN2A8MW95 431 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 CDRT15L2A8MXV6 281 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 I6L893 689 aaPredicted RBP7.53□□□□□ -1.2
CSDE1-206ENST00000483030 FPGTO14772 594 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 MUSKO15146 869 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 ARHGAP6O43182 974 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 SPINT1O43278 529 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 EFSO43281 561 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 LZTS3O60299 673 aaPredicted RBP7.53□□□□□ -1.2
CSDE1-206ENST00000483030 ZNF821O75541 412 aaPredicted RBP7.53□□□□□ -1.2
CSDE1-206ENST00000483030 GCATO75600 419 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 TNFSF15O95150 251 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 AFPP02771 609 aaKnown RBP7.53□□□□□ -1.2
CSDE1-206ENST00000483030 ADRB3P13945 408 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 TFE3P19532 575 aaPredicted RBP7.53□□□□□ -1.2
CSDE1-206ENST00000483030 L1CAMP32004 1257 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 NOS2P35228 1153 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 RABIFP47224 123 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 CXCR3P49682 368 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 NEK3P51956 506 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 RNASE9P60153 205 aaKnown RBP7.53□□□□□ -1.2
CSDE1-206ENST00000483030 SLC6A3Q01959 620 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 EIF2B5Q13144 721 aaKnown RBP7.53□□□□□ -1.2
CSDE1-206ENST00000483030 CLN3Q13286 438 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 SGCGQ13326 291 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 C1orf61Q13536 156 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 PDE1CQ14123 709 aaPredicted RBP7.53□□□□□ -1.2
CSDE1-206ENST00000483030 DRAP1Q14919 205 aaPredicted RBP7.53□□□□□ -1.2
CSDE1-206ENST00000483030 NR0B2Q15466 257 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 ARHGAP44Q17R89 818 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 ZSCAN23Q3MJ62 389 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 PERM1Q5SV97 790 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 KIAA1161Q6NSJ0 714 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 TTI2Q6NXR4 508 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 C22orf39Q6P5X5 142 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 GJB7Q6PEY0 223 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 OLFML1Q6UWY5 402 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 LRRC31Q6UY01 552 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 C11orf57Q6ZUT1 292 aaPredicted RBP7.53□□□□□ -1.2
CSDE1-206ENST00000483030 FAM183BPQ6ZVS7 135 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 PRICKLE2Q7Z3G6 844 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 TFAP2DQ7Z6R9 452 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 SETD3Q86TU7 594 aaPredicted RBP7.53□□□□□ -1.2
CSDE1-206ENST00000483030 PASD1Q8IV76 773 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 TRIM59Q8IWR1 403 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 ZNF683Q8IZ20 524 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 ARL14Q8N4G2 192 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 EXD3Q8N9H8 876 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 DCAF4L2Q8NA75 395 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 OR7D4Q8NG98 312 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 WDR36Q8NI36 951 aaKnown RBP7.53□□□□□ -1.2
CSDE1-206ENST00000483030 NELFBQ8WX92 580 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 PPP1R16AQ96I34 528 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 KLF6Q99612 283 aaPredicted RBP7.53□□□□□ -1.2
CSDE1-206ENST00000483030 HEPHQ9BQS7 1158 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 CRACR2AQ9BSW2 395 aa7.53□□□□□ -1.2
CSDE1-206ENST00000483030 C1QTNF2Q9BXJ5 285 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms