RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 MDM1Q8TC05 714 aa13.71□□□□□ -0.21
CTDSP1-208ENST00000482272 FAM172AQ8WUF8 416 aa13.71□□□□□ -0.21
CTDSP1-208ENST00000482272 CENPIQ92674 756 aaPredicted RBP13.71□□□□□ -0.21
CTDSP1-208ENST00000482272 KLK6Q92876 244 aa13.71□□□□□ -0.21
CTDSP1-208ENST00000482272 VOPP1Q96AW1 172 aa13.71□□□□□ -0.21
CTDSP1-208ENST00000482272 MAGEH1Q9H213 219 aa13.71□□□□□ -0.21
CTDSP1-208ENST00000482272 SEPT11Q9NVA2 429 aaKnown RBP13.71□□□□□ -0.21
CTDSP1-208ENST00000482272 DNAI1Q9UI46 699 aa13.71□□□□□ -0.21
CTDSP1-208ENST00000482272 COL5A1P20908 1838 aaPredicted RBP13.71□□□□□ -0.22
CTDSP1-208ENST00000482272 ANKRD62A6NC57 917 aa13.7□□□□□ -0.22
CTDSP1-208ENST00000482272 SIGLEC16A6NMB1 481 aa13.7□□□□□ -0.22
CTDSP1-208ENST00000482272 LGALS16A8MUM7 142 aa13.7□□□□□ -0.22
CTDSP1-208ENST00000482272 CD160O95971 181 aa13.7□□□□□ -0.22
CTDSP1-208ENST00000482272 PLEKP08567 350 aaPredicted RBP13.7□□□□□ -0.22
CTDSP1-208ENST00000482272 JUPP14923 745 aa13.7□□□□□ -0.22
CTDSP1-208ENST00000482272 GPD1P21695 349 aa13.7□□□□□ -0.22
CTDSP1-208ENST00000482272 ITGB7P26010 798 aa13.7□□□□□ -0.22
CTDSP1-208ENST00000482272 L1CAMP32004 1257 aa13.7□□□□□ -0.22
CTDSP1-208ENST00000482272 RFC1P35251 1148 aaPredicted RBP13.7□□□□□ -0.22
CTDSP1-208ENST00000482272 HNF1BP35680 557 aa13.7□□□□□ -0.22
CTDSP1-208ENST00000482272 CCNHP51946 323 aaPredicted RBP13.7□□□□□ -0.22
CTDSP1-208ENST00000482272 GSCP56915 257 aaPredicted RBP13.7□□□□□ -0.22
CTDSP1-208ENST00000482272 DNAJC3Q13217 504 aa13.7□□□□□ -0.22
CTDSP1-208ENST00000482272 CLEC16AQ2KHT3 1053 aa13.7□□□□□ -0.22
CTDSP1-208ENST00000482272 ZNF284Q2VY69 593 aa13.7□□□□□ -0.22
CTDSP1-208ENST00000482272 MANEALQ5VSG8 457 aa13.7□□□□□ -0.22
CTDSP1-208ENST00000482272 SFMBT2Q5VUG0 894 aa13.7□□□□□ -0.22
CTDSP1-208ENST00000482272 WDR59Q6PJI9 974 aa13.7□□□□□ -0.22
CTDSP1-208ENST00000482272 SLFN11Q7Z7L1 901 aa13.7□□□□□ -0.22
CTDSP1-208ENST00000482272 RYBPQ8N488 228 aaPredicted RBP13.7□□□□□ -0.22
CTDSP1-208ENST00000482272 TMEM145Q8NBT3 493 aa13.7□□□□□ -0.22
CTDSP1-208ENST00000482272 C3orf20Q8ND61 904 aa13.7□□□□□ -0.22
CTDSP1-208ENST00000482272 ARHGEF2Q92974 986 aaKnown RBP13.7□□□□□ -0.22
CTDSP1-208ENST00000482272 ISG20Q96AZ6 181 aaKnown RBP13.7□□□□□ -0.22
CTDSP1-208ENST00000482272 TBC1D31Q96DN5 1066 aa13.7□□□□□ -0.22
CTDSP1-208ENST00000482272 LRIG1Q96JA1 1093 aa13.7□□□□□ -0.22
CTDSP1-208ENST00000482272 ERGIC2Q96RQ1 377 aa13.7□□□□□ -0.22
CTDSP1-208ENST00000482272 AGPAT1Q99943 283 aa13.7□□□□□ -0.22
CTDSP1-208ENST00000482272 MYOCQ99972 504 aa13.7□□□□□ -0.22
CTDSP1-208ENST00000482272 TMEM248Q9NWD8 314 aa13.7□□□□□ -0.22
CTDSP1-208ENST00000482272 TMEM63CQ9P1W3 806 aa13.7□□□□□ -0.22
CTDSP1-208ENST00000482272 HECAQ9UBI9 543 aaPredicted RBP13.7□□□□□ -0.22
CTDSP1-208ENST00000482272 DKK4Q9UBT3 224 aa13.7□□□□□ -0.22
CTDSP1-208ENST00000482272 RALYQ9UKM9 306 aaKnown RBP13.7□□□□□ -0.22
CTDSP1-208ENST00000482272 CA5BQ9Y2D0 317 aa13.7□□□□□ -0.22
CTDSP1-208ENST00000482272 FCF1Q9Y324 198 aaKnown RBP13.7□□□□□ -0.22
CTDSP1-208ENST00000482272 HS3ST3A1Q9Y663 406 aa13.7□□□□□ -0.22
CTDSP1-208ENST00000482272 WASF2Q9Y6W5 498 aa13.7□□□□□ -0.22
CTDSP1-208ENST00000482272 FREM2Q5SZK8 3169 aa13.69□□□□□ -0.22
CTDSP1-208ENST00000482272 IGF2RP11717 2491 aa13.69□□□□□ -0.22
CTDSP1-208ENST00000482272 TCRBV5S1A1TA0A578 114 aa13.69□□□□□ -0.22
CTDSP1-208ENST00000482272 FAM149AA5PLN7 773 aa13.69□□□□□ -0.22
CTDSP1-208ENST00000482272 LRIG2O94898 1065 aa13.69□□□□□ -0.22
CTDSP1-208ENST00000482272 ADRB3P13945 408 aa13.69□□□□□ -0.22
CTDSP1-208ENST00000482272 PRLRP16471 622 aa13.69□□□□□ -0.22
CTDSP1-208ENST00000482272 CKMT2P17540 419 aa13.69□□□□□ -0.22
CTDSP1-208ENST00000482272 DESP17661 470 aa13.69□□□□□ -0.22
CTDSP1-208ENST00000482272 ACVRL1P37023 503 aa13.69□□□□□ -0.22
CTDSP1-208ENST00000482272 SNRPD1P62314 119 aaKnown RBP13.69□□□□□ -0.22
CTDSP1-208ENST00000482272 RPS21P63220 83 aaKnown RBP13.69□□□□□ -0.22
CTDSP1-208ENST00000482272 ILKQ13418 452 aa13.69□□□□□ -0.22
CTDSP1-208ENST00000482272 POLD3Q15054 466 aaPredicted RBP13.69□□□□□ -0.22
CTDSP1-208ENST00000482272 KIAA1161Q6NSJ0 714 aa13.69□□□□□ -0.22
CTDSP1-208ENST00000482272 ZSCAN30Q86W11 494 aa13.69□□□□□ -0.22
CTDSP1-208ENST00000482272 NLRP14Q86W24 1093 aa13.69□□□□□ -0.22
CTDSP1-208ENST00000482272 ZNF354CQ86Y25 554 aa13.69□□□□□ -0.22
CTDSP1-208ENST00000482272 DCP2Q8IU60 420 aaKnown RBP13.69□□□□□ -0.22
CTDSP1-208ENST00000482272 CCDC185Q8N715 623 aa13.69□□□□□ -0.22
CTDSP1-208ENST00000482272 NTAN1Q96AB6 310 aa13.69□□□□□ -0.22
CTDSP1-208ENST00000482272 SLC17A9Q9BYT1 436 aa13.69□□□□□ -0.22
CTDSP1-208ENST00000482272 ZDHHC6Q9H6R6 413 aa13.69□□□□□ -0.22
CTDSP1-208ENST00000482272 KLHL11Q9NVR0 708 aa13.69□□□□□ -0.22
CTDSP1-208ENST00000482272 LHX6Q9UPM6 363 aa13.69□□□□□ -0.22
CTDSP1-208ENST00000482272 ZFR2Q9UPR6 939 aaKnown RBP13.69□□□□□ -0.22
CTDSP1-208ENST00000482272 TEX33O43247 280 aa13.68□□□□□ -0.22
CTDSP1-208ENST00000482272 KDELR3O43731 214 aa13.68□□□□□ -0.22
CTDSP1-208ENST00000482272 AP1G1O43747 822 aa13.68□□□□□ -0.22
CTDSP1-208ENST00000482272 RAMP2O60895 175 aa13.68□□□□□ -0.22
CTDSP1-208ENST00000482272 SDC3O75056 442 aa13.68□□□□□ -0.22
CTDSP1-208ENST00000482272 POP4O95707 220 aaKnown RBP13.68□□□□□ -0.22
CTDSP1-208ENST00000482272 MBD3O95983 291 aa13.68□□□□□ -0.22
CTDSP1-208ENST00000482272 PAK4O96013 591 aaPredicted RBP13.68□□□□□ -0.22
CTDSP1-208ENST00000482272 FERP16591 822 aa13.68□□□□□ -0.22
CTDSP1-208ENST00000482272 ACADVLP49748 655 aa13.68□□□□□ -0.22
CTDSP1-208ENST00000482272 HDAC4P56524 1084 aa13.68□□□□□ -0.22
CTDSP1-208ENST00000482272 RAD51Q06609 339 aa13.68□□□□□ -0.22
CTDSP1-208ENST00000482272 C1QBPQ07021 282 aaKnown RBP13.68□□□□□ -0.22
CTDSP1-208ENST00000482272 CYP4F3Q08477 520 aa13.68□□□□□ -0.22
CTDSP1-208ENST00000482272 SGCGQ13326 291 aa13.68□□□□□ -0.22
CTDSP1-208ENST00000482272 MAPK8IP2Q13387 824 aaPredicted RBP13.68□□□□□ -0.22
CTDSP1-208ENST00000482272 CAMK2BQ13554 666 aa13.68□□□□□ -0.22
CTDSP1-208ENST00000482272 SCYL2Q6P3W7 929 aa13.68□□□□□ -0.22
CTDSP1-208ENST00000482272 MON1BQ7L1V2 547 aa13.68□□□□□ -0.22
CTDSP1-208ENST00000482272 KANSL1Q7Z3B3 1105 aa13.68□□□□□ -0.22
CTDSP1-208ENST00000482272 AOPEPQ8N6M6 819 aa13.68□□□□□ -0.22
CTDSP1-208ENST00000482272 OR2AP1Q8NGE2 309 aa13.68□□□□□ -0.22
CTDSP1-208ENST00000482272 TSC1Q92574 1164 aa13.68□□□□□ -0.22
CTDSP1-208ENST00000482272 RAB7BQ96AH8 199 aa13.68□□□□□ -0.22
CTDSP1-208ENST00000482272 CALN1Q9BXU9 219 aa13.68□□□□□ -0.22
CTDSP1-208ENST00000482272 TM6SF2Q9BZW4 377 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms